RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 SSTP61278 116 aa16.23■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 PRELID3AQ96N28 172 aa16.23■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 AP5S1Q9NUS5 200 aa16.23■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 CSN3P07498 182 aa16.22■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 MRPL51Q4U2R6 128 aaKnown RBP16.22■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 HSPB8Q9UJY1 196 aa16.22■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 IGKV3D-20A0A0C4DH25 116 aa16.21■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 MUC21A0A0G2JKD1 596 aa16.21■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 MUC21A0A140T8X8 626 aa16.21■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 MUC21Q5SSG8 566 aa16.21■□□□□ 0.19
VPS9D1-AS1-202ENST00000562866 FOXE3Q13461 319 aa16.21■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 Q96MF0 132 aa16.21■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 C20orf202A1L168 122 aa16.2■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 PPBPP02775 128 aa16.2■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 ELANEP08246 267 aa16.2■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 SPATA45Q537H7 98 aa16.2■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 TRBV7-9A0A0J9YWB2 115 aa16.19■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 CRXO43186 299 aaPredicted RBP16.19■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 CKS2P33552 79 aa16.19■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 ID1P41134 155 aa16.19■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 MRPL52Q86TS9 123 aaKnown RBP16.19■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 KLHDC1Q8N7A1 406 aa16.19■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 C11orf21Q9P2W6 132 aa16.19■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 CSMD1Q96PZ7 3565 aa16.19■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 MAP1LC3CQ9BXW4 147 aa16.18■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 SYS1-DBNDD2H3BUS1 97 aa16.18■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 CACNG7P62955 275 aa16.18■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 OR8A1Q8NGG7 326 aa16.18■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 OR10AG1Q8NH19 301 aa16.18■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 ZNF702PQ9H963 129 aa16.18■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 LAMTOR2Q9Y2Q5 125 aa16.18■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 ZNF705AQ6ZN79 300 aaPredicted RBP16.17■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 SMIM15Q7Z3B0 74 aa16.17■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 TRAV9-2A0A087WT02 112 aa16.16■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 TRAV21A0A0B4J279 112 aa16.16■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 HOXA3O43365 443 aaPredicted RBP16.16■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 PET117Q6UWS5 81 aa16.16■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 TEX29Q8N6K0 151 aa16.16■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 C2orf88Q9BSF0 95 aa16.16■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 SIGLEC8Q9NYZ4 499 aa16.16■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 ANKRD17O75179 2603 aaKnown RBP16.16■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 RPLP1P05386 114 aaKnown RBP16.15■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 LGALS1P09382 135 aaKnown RBP16.15■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 IFI27P40305 119 aaPredicted RBP16.15■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 LURAP1LQ8IV03 231 aa16.15■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 ZFAND2AQ8N6M9 145 aa16.15■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 MYOZ3Q8TDC0 251 aa16.15■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 MSRB1Q9NZV6 116 aa16.15■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 CHD6Q8TD26 2715 aa16.15■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 M0R143 59 aa16.15■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 RNF185Q96GF1 192 aa16.15■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 FAM19A4Q96LR4 140 aa16.15■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 CR1P17927 2039 aa16.15■□□□□ 0.18
VPS9D1-AS1-202ENST00000562866 IGHV4-4A0A075B6R2 117 aa16.14■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 SNAI2O43623 268 aa16.14■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 C10orf99Q6UWK7 81 aa16.14■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 UQCR10Q9UDW1 63 aa16.14■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 SVEP1Q4LDE5 3571 aa16.14■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 FAM208BQ5VWN6 2430 aa16.14■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 IGKV3-7A0A075B6H7 116 aa16.13■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 LOC389332A0A1B0GUA5 103 aa16.13■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 PRR9Q5T870 116 aa16.13■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 KRTAP1-3Q8IUG1 177 aa16.13■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 RNF152Q8N8N0 203 aa16.13■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 UBE2E2Q96LR5 201 aa16.13■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 TCF21O43680 179 aa16.13■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 LINC00173Q6ZV60 143 aa16.13■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 APRG1Q8IVJ8 170 aa16.13■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 ATOH7Q8N100 152 aa16.13■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 MAP1LC3AQ9H492 121 aa16.13■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 UTP20O75691 2785 aaKnown RBP16.12■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 LGALS9O00182 355 aa16.12■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 NPYP01303 97 aa16.12■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 IGLC3P0DOY3 106 aa16.11■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 Q8N2B8 174 aa16.11■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 PRRC2AP48634 2157 aaKnown RBP16.11■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 OR4C46A6NHA9 309 aa16.1■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 SMKR1H3BMG3 65 aa16.1■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 SPANXN1Q5VSR9 72 aa16.1■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 SPATA12Q7Z6I5 190 aa16.1■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 DCANP1Q8TF63 244 aa16.1■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 VPS13CQ709C8 3753 aa16.1■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 NCR2O95944 276 aa16.1■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 ZNF747Q9BV97 191 aa16.1■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 SNHG12Q9BXW3 62 aa16.1■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 FBN2P35556 2912 aa16.1■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 LRRK2Q5S007 2527 aa16.09■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 MED14OSP0DP75 135 aa16.09■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 SRD5A1P18405 259 aa16.09■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 F6UB75 175 aa16.08■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 H3BVH4 76 aa16.08■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 J3KRW8 73 aa16.08■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 EREGO14944 169 aa16.08■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 EDN2P20800 178 aa16.08■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 RNASE4P34096 147 aaKnown RBP16.08■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 ASIPP42127 132 aa16.08■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 TMEM86BQ8N661 226 aa16.08■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 NXT2Q9NPJ8 142 aaKnown RBP16.08■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 TIMM8BQ9Y5J9 83 aaPredicted RBP16.08■□□□□ 0.17
VPS9D1-AS1-202ENST00000562866 HBDP02042 147 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms