RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 PRIMA1Q86XR5 153 aa10.66□□□□□ -0.7
COMMD4-205ENST00000562310 TSKUQ8WUA8 353 aa10.66□□□□□ -0.7
COMMD4-205ENST00000562310 GFRA4Q9GZZ7 299 aa10.66□□□□□ -0.7
COMMD4-205ENST00000562310 MAP6D1Q9H9H5 199 aa10.66□□□□□ -0.7
COMMD4-205ENST00000562310 TGIF2-C20orf24A0A0A6YYL0 155 aa10.65□□□□□ -0.7
COMMD4-205ENST00000562310 FABP5P3A8MUU1 101 aa10.65□□□□□ -0.7
COMMD4-205ENST00000562310 ZNF705DP0CH99 300 aaPredicted RBP10.65□□□□□ -0.7
COMMD4-205ENST00000562310 ZNF705BP0CI00 300 aaPredicted RBP10.65□□□□□ -0.7
COMMD4-205ENST00000562310 CRIP1P50238 77 aa10.65□□□□□ -0.7
COMMD4-205ENST00000562310 DEFB131AP59861 70 aa10.65□□□□□ -0.7
COMMD4-205ENST00000562310 APRG1Q8IVJ8 170 aa10.65□□□□□ -0.7
COMMD4-205ENST00000562310 OR2D3Q8NGH3 330 aa10.65□□□□□ -0.7
COMMD4-205ENST00000562310 TMEM158Q8WZ71 300 aa10.65□□□□□ -0.7
COMMD4-205ENST00000562310 FAM210BQ96KR6 192 aa10.65□□□□□ -0.7
COMMD4-205ENST00000562310 MCRIP2Q9BUT9 160 aaKnown RBP10.65□□□□□ -0.7
COMMD4-205ENST00000562310 ZNF256Q9Y2P7 627 aaPredicted RBP10.65□□□□□ -0.7
COMMD4-205ENST00000562310 IZUMO1RA6ND01 250 aa10.64□□□□□ -0.71
COMMD4-205ENST00000562310 TYMSP04818 313 aa10.64□□□□□ -0.71
COMMD4-205ENST00000562310 CXCL1P09341 107 aa10.64□□□□□ -0.71
COMMD4-205ENST00000562310 HLA-DRB4P13762 266 aa10.64□□□□□ -0.71
COMMD4-205ENST00000562310 TSPOP30536 169 aa10.64□□□□□ -0.71
COMMD4-205ENST00000562310 DEFB1P60022 68 aa10.64□□□□□ -0.71
COMMD4-205ENST00000562310 C9orf66Q5T8R8 295 aa10.64□□□□□ -0.71
COMMD4-205ENST00000562310 Q6AWC8 147 aa10.64□□□□□ -0.71
COMMD4-205ENST00000562310 SHISA2Q6UWI4 295 aa10.64□□□□□ -0.71
COMMD4-205ENST00000562310 ZFAND2AQ8N6M9 145 aa10.64□□□□□ -0.71
COMMD4-205ENST00000562310 FAM110AQ9BQ89 295 aa10.64□□□□□ -0.71
COMMD4-205ENST00000562310 NAT8BQ9UHF3 227 aa10.64□□□□□ -0.71
COMMD4-205ENST00000562310 HLA-DRB4X5D2U9 266 aa10.64□□□□□ -0.71
COMMD4-205ENST00000562310 TMEM189A5PLL7 270 aa10.63□□□□□ -0.71
COMMD4-205ENST00000562310 A8MTW9 85 aa10.63□□□□□ -0.71
COMMD4-205ENST00000562310 ZNF80P51504 273 aaPredicted RBP10.63□□□□□ -0.71
COMMD4-205ENST00000562310 FAM3BP58499 235 aaPredicted RBP10.63□□□□□ -0.71
COMMD4-205ENST00000562310 C12orf54Q6X4T0 127 aa10.63□□□□□ -0.71
COMMD4-205ENST00000562310 C3orf56Q8N813 242 aa10.63□□□□□ -0.71
COMMD4-205ENST00000562310 TRAV21A0A0B4J279 112 aa10.62□□□□□ -0.71
COMMD4-205ENST00000562310 KLLNB2CW77 178 aa10.62□□□□□ -0.71
COMMD4-205ENST00000562310 OR11H12B2RN74 326 aa10.62□□□□□ -0.71
COMMD4-205ENST00000562310 CA1P00915 261 aaPredicted RBP10.62□□□□□ -0.71
COMMD4-205ENST00000562310 GPX1P07203 203 aa10.62□□□□□ -0.71
COMMD4-205ENST00000562310 LINC01559Q495D7 138 aa10.62□□□□□ -0.71
COMMD4-205ENST00000562310 COX19Q49B96 90 aa10.62□□□□□ -0.71
COMMD4-205ENST00000562310 GDF5OSQ5U4N7 250 aa10.62□□□□□ -0.71
COMMD4-205ENST00000562310 CLUHP3Q96NS8 147 aa10.62□□□□□ -0.71
COMMD4-205ENST00000562310 NEU1Q99519 415 aa10.62□□□□□ -0.71
COMMD4-205ENST00000562310 HIGD1CA8MV81 97 aa10.61□□□□□ -0.71
COMMD4-205ENST00000562310 CD33P20138 364 aa10.61□□□□□ -0.71
COMMD4-205ENST00000562310 TCL1AP56279 114 aa10.61□□□□□ -0.71
COMMD4-205ENST00000562310 BEAN1Q3B7T3 259 aa10.61□□□□□ -0.71
COMMD4-205ENST00000562310 ODF3L2Q3SX64 289 aa10.61□□□□□ -0.71
COMMD4-205ENST00000562310 ACTL10Q5JWF8 245 aa10.61□□□□□ -0.71
COMMD4-205ENST00000562310 ATP5L2Q7Z4Y8 100 aa10.61□□□□□ -0.71
COMMD4-205ENST00000562310 SRD5A3Q9H8P0 318 aa10.61□□□□□ -0.71
COMMD4-205ENST00000562310 H3BMM0 161 aa10.6□□□□□ -0.71
COMMD4-205ENST00000562310 ORM1P02763 201 aa10.6□□□□□ -0.71
COMMD4-205ENST00000562310 RPS10P46783 165 aaKnown RBP10.6□□□□□ -0.71
COMMD4-205ENST00000562310 PRR9Q5T870 116 aa10.6□□□□□ -0.71
COMMD4-205ENST00000562310 RASL11AQ6T310 242 aa10.6□□□□□ -0.71
COMMD4-205ENST00000562310 C7orf71A4D174 169 aa10.59□□□□□ -0.71
COMMD4-205ENST00000562310 KNCNA6PVL3 124 aa10.59□□□□□ -0.71
COMMD4-205ENST00000562310 CDKN1BP46527 198 aa10.59□□□□□ -0.71
COMMD4-205ENST00000562310 FOXA3P55318 350 aaPredicted RBP10.59□□□□□ -0.71
COMMD4-205ENST00000562310 WDR73Q6P4I2 378 aa10.59□□□□□ -0.71
COMMD4-205ENST00000562310 AMTNQ6UX39 209 aa10.59□□□□□ -0.71
COMMD4-205ENST00000562310 WFDC9Q8NEX5 89 aa10.59□□□□□ -0.71
COMMD4-205ENST00000562310 NUP35Q8NFH5 326 aa10.59□□□□□ -0.71
COMMD4-205ENST00000562310 ATRQ13535 2644 aa10.58□□□□□ -0.72
COMMD4-205ENST00000562310 C1orf196B1AJZ1 125 aa10.58□□□□□ -0.72
COMMD4-205ENST00000562310 AMBPP02760 352 aa10.58□□□□□ -0.72
COMMD4-205ENST00000562310 MT-ND6P03923 174 aa10.58□□□□□ -0.72
COMMD4-205ENST00000562310 RNASE4P34096 147 aaKnown RBP10.58□□□□□ -0.72
COMMD4-205ENST00000562310 GTSF1Q8WW33 167 aa10.58□□□□□ -0.72
COMMD4-205ENST00000562310 BORCS7Q96B45 105 aa10.58□□□□□ -0.72
COMMD4-205ENST00000562310 A0A1B0GW15 77 aa10.57□□□□□ -0.72
COMMD4-205ENST00000562310 J3KRW8 73 aa10.57□□□□□ -0.72
COMMD4-205ENST00000562310 IGKV3-20P01619 116 aa10.57□□□□□ -0.72
COMMD4-205ENST00000562310 S100A8P05109 93 aa10.57□□□□□ -0.72
COMMD4-205ENST00000562310 CTRLP40313 264 aa10.57□□□□□ -0.72
COMMD4-205ENST00000562310 RAB5BP61020 215 aa10.57□□□□□ -0.72
COMMD4-205ENST00000562310 STHQ8IWL8 128 aa10.57□□□□□ -0.72
COMMD4-205ENST00000562310 TMA7Q9Y2S6 64 aaKnown RBP10.57□□□□□ -0.72
COMMD4-205ENST00000562310 TMSB15BA0A087X1C1 80 aa10.56□□□□□ -0.72
COMMD4-205ENST00000562310 WIPF1O43516 503 aa10.56□□□□□ -0.72
COMMD4-205ENST00000562310 GZMBP10144 247 aa10.56□□□□□ -0.72
COMMD4-205ENST00000562310 SPINK13Q1W4C9 94 aa10.56□□□□□ -0.72
COMMD4-205ENST00000562310 GFI1BQ5VTD9 330 aa10.56□□□□□ -0.72
COMMD4-205ENST00000562310 GTSCR1Q86UQ5 136 aa10.56□□□□□ -0.72
COMMD4-205ENST00000562310 FER1L6-AS1Q8NA97 138 aa10.56□□□□□ -0.72
COMMD4-205ENST00000562310 KCNS1Q96KK3 526 aa10.56□□□□□ -0.72
COMMD4-205ENST00000562310 PGLYRP4Q96LB8 373 aa10.56□□□□□ -0.72
COMMD4-205ENST00000562310 GNB1LQ9BYB4 327 aa10.56□□□□□ -0.72
COMMD4-205ENST00000562310 AGRNO00468 2067 aa10.55□□□□□ -0.72
COMMD4-205ENST00000562310 IGKV3D-20A0A0C4DH25 116 aa10.55□□□□□ -0.72
COMMD4-205ENST00000562310 A0A1B0GUT8 65 aa10.55□□□□□ -0.72
COMMD4-205ENST00000562310 A0A1B0GXF2 115 aa10.55□□□□□ -0.72
COMMD4-205ENST00000562310 F2Z2F3 143 aa10.55□□□□□ -0.72
COMMD4-205ENST00000562310 HLA-DQA1P01909 254 aa10.55□□□□□ -0.72
COMMD4-205ENST00000562310 IGLC6P0CF74 106 aa10.55□□□□□ -0.72
COMMD4-205ENST00000562310 HBBP68871 147 aa10.55□□□□□ -0.72
COMMD4-205ENST00000562310 RIGQ13278 110 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms