RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 HYLS1Q96M11 299 aa12.29□□□□□ -0.44
SMAD3-210ENST00000559092 TRGV1A0A0A0MS02 117 aa12.28□□□□□ -0.44
SMAD3-210ENST00000559092 RTL8CO15255 209 aa12.28□□□□□ -0.44
SMAD3-210ENST00000559092 HOXA5P20719 270 aa12.28□□□□□ -0.44
SMAD3-210ENST00000559092 Q5BKY6 102 aa12.28□□□□□ -0.44
SMAD3-210ENST00000559092 SOHLH1Q5JUK2 328 aa12.28□□□□□ -0.44
SMAD3-210ENST00000559092 TMPRSS5Q9H3S3 457 aa12.28□□□□□ -0.44
SMAD3-210ENST00000559092 KLF12Q9Y4X4 402 aa12.28□□□□□ -0.44
SMAD3-210ENST00000559092 DNAH17Q9UFH2 4485 aa12.27□□□□□ -0.45
SMAD3-210ENST00000559092 EIF3GO75821 320 aaKnown RBP eCLIP12.27□□□□□ -0.45
SMAD3-210ENST00000559092 STAG3L2P0CL84 134 aa12.27□□□□□ -0.45
SMAD3-210ENST00000559092 STAG3L3P0CL85 134 aa12.27□□□□□ -0.45
SMAD3-210ENST00000559092 ATP6V0CP27449 155 aa12.27□□□□□ -0.45
SMAD3-210ENST00000559092 CDC34P49427 236 aaPredicted RBP12.27□□□□□ -0.45
SMAD3-210ENST00000559092 RGS21Q2M5E4 152 aa12.27□□□□□ -0.45
SMAD3-210ENST00000559092 Q6AWC8 147 aa12.27□□□□□ -0.45
SMAD3-210ENST00000559092 ZNRF2Q8NHG8 242 aa12.27□□□□□ -0.45
SMAD3-210ENST00000559092 ARPC5LQ9BPX5 153 aa12.27□□□□□ -0.45
SMAD3-210ENST00000559092 Q6ZQT7 251 aa12.26□□□□□ -0.45
SMAD3-210ENST00000559092 SUN5Q8TC36 379 aa12.26□□□□□ -0.45
SMAD3-210ENST00000559092 RAB24Q969Q5 203 aa12.26□□□□□ -0.45
SMAD3-210ENST00000559092 TP53TG3Q9ULZ0 132 aa12.26□□□□□ -0.45
SMAD3-210ENST00000559092 TNFSF18Q9UNG2 199 aa12.26□□□□□ -0.45
SMAD3-210ENST00000559092 LINC00588Q9Y4M8 146 aa12.26□□□□□ -0.45
SMAD3-210ENST00000559092 BORCS7-ASMTA0A0B4J1R7 106 aa12.25□□□□□ -0.45
SMAD3-210ENST00000559092 PRSS29PA6NIE9 313 aa12.25□□□□□ -0.45
SMAD3-210ENST00000559092 ARL14EPLP0DKL9 152 aa12.25□□□□□ -0.45
SMAD3-210ENST00000559092 C1orf134Q5TEV5 83 aa12.25□□□□□ -0.45
SMAD3-210ENST00000559092 SSX7Q7RTT5 188 aa12.25□□□□□ -0.45
SMAD3-210ENST00000559092 OR2T35Q8NGX2 323 aa12.25□□□□□ -0.45
SMAD3-210ENST00000559092 ST6GAL2Q96JF0 529 aa12.25□□□□□ -0.45
SMAD3-210ENST00000559092 A0A0J9YY99 117 aa12.24□□□□□ -0.45
SMAD3-210ENST00000559092 SERTM2A0A1B0GWG4 89 aa12.24□□□□□ -0.45
SMAD3-210ENST00000559092 HMGB3O15347 200 aaKnown RBP12.24□□□□□ -0.45
SMAD3-210ENST00000559092 ZNF415Q09FC8 603 aa12.24□□□□□ -0.45
SMAD3-210ENST00000559092 GOLT1AQ6ZVE7 132 aa12.24□□□□□ -0.45
SMAD3-210ENST00000559092 FXYD6-FXYD2A0A087WZ82 144 aa12.23□□□□□ -0.45
SMAD3-210ENST00000559092 NBDYA0A0U1RRE5 68 aa12.23□□□□□ -0.45
SMAD3-210ENST00000559092 A0A1B0GVY2 172 aa12.23□□□□□ -0.45
SMAD3-210ENST00000559092 RNF222A6NCQ9 220 aa12.23□□□□□ -0.45
SMAD3-210ENST00000559092 CXorf1O96002 111 aa12.23□□□□□ -0.45
SMAD3-210ENST00000559092 GCHFRP30047 84 aa12.23□□□□□ -0.45
SMAD3-210ENST00000559092 SLAQ13239 276 aa12.23□□□□□ -0.45
SMAD3-210ENST00000559092 TDRG1Q3Y452 100 aa12.23□□□□□ -0.45
SMAD3-210ENST00000559092 FAM159AQ6UWV7 190 aa12.23□□□□□ -0.45
SMAD3-210ENST00000559092 ACTR3CQ9C0K3 210 aaPredicted RBP12.23□□□□□ -0.45
SMAD3-210ENST00000559092 TMEM167BQ9NRX6 74 aa12.23□□□□□ -0.45
SMAD3-210ENST00000559092 TRGV11A0A075B6L2 103 aa12.22□□□□□ -0.45
SMAD3-210ENST00000559092 MUC21Q5SSG8 566 aa12.22□□□□□ -0.45
SMAD3-210ENST00000559092 RPL7L1Q6DKI1 246 aaKnown RBP12.22□□□□□ -0.45
SMAD3-210ENST00000559092 C5orf17Q8NAS9 161 aa12.22□□□□□ -0.45
SMAD3-210ENST00000559092 VSIG2Q96IQ7 327 aa12.22□□□□□ -0.45
SMAD3-210ENST00000559092 SPXQ9BT56 116 aa12.22□□□□□ -0.45
SMAD3-210ENST00000559092 SH3BGRL3Q9H299 93 aa12.22□□□□□ -0.45
SMAD3-210ENST00000559092 RPH3ALQ9UNE2 315 aa12.22□□□□□ -0.45
SMAD3-210ENST00000559092 TRAV21A0A0B4J279 112 aa12.21□□□□□ -0.45
SMAD3-210ENST00000559092 TAAR5O14804 337 aa12.21□□□□□ -0.45
SMAD3-210ENST00000559092 ESRGQ1W209 222 aa12.21□□□□□ -0.45
SMAD3-210ENST00000559092 UPK3BQ9BT76 320 aa12.21□□□□□ -0.45
SMAD3-210ENST00000559092 Q9H8V8 135 aa12.21□□□□□ -0.45
SMAD3-210ENST00000559092 TREM1Q9NP99 234 aa12.21□□□□□ -0.45
SMAD3-210ENST00000559092 MDFICQ9P1T7 246 aa12.21□□□□□ -0.45
SMAD3-210ENST00000559092 K7EQM0 130 aa12.2□□□□□ -0.46
SMAD3-210ENST00000559092 TCRAP04437 139 aa12.2□□□□□ -0.46
SMAD3-210ENST00000559092 RASL10AQ92737 203 aa12.2□□□□□ -0.46
SMAD3-210ENST00000559092 TVP23CQ96ET8 276 aa12.2□□□□□ -0.46
SMAD3-210ENST00000559092 MRPL16Q9NX20 251 aaKnown RBP12.2□□□□□ -0.46
SMAD3-210ENST00000559092 PRO0255Q9UI72 69 aa12.2□□□□□ -0.46
SMAD3-210ENST00000559092 TRAV8-1A0A0A6YYK1 113 aa12.19□□□□□ -0.46
SMAD3-210ENST00000559092 FBLL1A6NHQ2 334 aaKnown RBP12.19□□□□□ -0.46
SMAD3-210ENST00000559092 PAX4O43316 350 aa12.19□□□□□ -0.46
SMAD3-210ENST00000559092 GNG5P63218 68 aa12.19□□□□□ -0.46
SMAD3-210ENST00000559092 TMEM183BQ1AE95 376 aa12.19□□□□□ -0.46
SMAD3-210ENST00000559092 IQCF2Q8IXL9 164 aa12.19□□□□□ -0.46
SMAD3-210ENST00000559092 TMEM183AQ8IXX5 376 aa12.19□□□□□ -0.46
SMAD3-210ENST00000559092 NDFIP1Q9BT67 221 aa12.19□□□□□ -0.46
SMAD3-210ENST00000559092 EPDR1Q9UM22 224 aa12.19□□□□□ -0.46
SMAD3-210ENST00000559092 PKHD1P08F94 4074 aa12.19□□□□□ -0.46
SMAD3-210ENST00000559092 A0A096LPF7 62 aa12.18□□□□□ -0.46
SMAD3-210ENST00000559092 A0A1W2PRE2 83 aa12.18□□□□□ -0.46
SMAD3-210ENST00000559092 G3V3Q6 166 aa12.18□□□□□ -0.46
SMAD3-210ENST00000559092 SUMO1P63165 101 aaKnown RBP12.18□□□□□ -0.46
SMAD3-210ENST00000559092 KCNS1Q96KK3 526 aa12.18□□□□□ -0.46
SMAD3-210ENST00000559092 HHLA3Q9XRX5 114 aa12.18□□□□□ -0.46
SMAD3-210ENST00000559092 MRPS16Q9Y3D3 137 aaKnown RBP12.18□□□□□ -0.46
SMAD3-210ENST00000559092 FHL2Q14192 279 aa12.17□□□□□ -0.46
SMAD3-210ENST00000559092 TTC32Q5I0X7 151 aa12.17□□□□□ -0.46
SMAD3-210ENST00000559092 C6orf223Q8N319 242 aa12.17□□□□□ -0.46
SMAD3-210ENST00000559092 NAGKQ9UJ70 344 aa12.17□□□□□ -0.46
SMAD3-210ENST00000559092 NACAE9PAV3 2078 aa12.16□□□□□ -0.46
SMAD3-210ENST00000559092 IGHV3-16A0A0C4DH30 117 aa12.16□□□□□ -0.46
SMAD3-210ENST00000559092 CTXND1A0A1B0GTU2 59 aa12.16□□□□□ -0.46
SMAD3-210ENST00000559092 A0A1W2PPQ1 181 aa12.16□□□□□ -0.46
SMAD3-210ENST00000559092 GGTLC3B5MD39 225 aa12.16□□□□□ -0.46
SMAD3-210ENST00000559092 IGHV3-53P01767 116 aa12.16□□□□□ -0.46
SMAD3-210ENST00000559092 CRYBA4P53673 196 aa12.16□□□□□ -0.46
SMAD3-210ENST00000559092 SDF2L1Q9HCN8 221 aa12.16□□□□□ -0.46
SMAD3-210ENST00000559092 PSG8Q9UQ74 426 aa12.16□□□□□ -0.46
SMAD3-210ENST00000559092 ICOSQ9Y6W8 199 aa12.16□□□□□ -0.46
SMAD3-210ENST00000559092 PKD1P98161 4303 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms