RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 FOXE3Q13461 319 aa15.87■□□□□ 0.13
PRDM4-205ENST00000550376 WFDC12Q8WWY7 111 aa15.87■□□□□ 0.13
PRDM4-205ENST00000550376 DUX3Q96PT4 197 aa15.87■□□□□ 0.13
PRDM4-205ENST00000550376 NRN1Q9NPD7 142 aa15.87■□□□□ 0.13
PRDM4-205ENST00000550376 SOCS3O14543 225 aa15.87■□□□□ 0.13
PRDM4-205ENST00000550376 FABP5P3A8MUU1 101 aa15.86■□□□□ 0.13
PRDM4-205ENST00000550376 AMTP48728 403 aa15.86■□□□□ 0.13
PRDM4-205ENST00000550376 PRR9Q5T870 116 aa15.86■□□□□ 0.13
PRDM4-205ENST00000550376 COX8CQ7Z4L0 72 aa15.86■□□□□ 0.13
PRDM4-205ENST00000550376 MSRB1Q9NZV6 116 aa15.86■□□□□ 0.13
PRDM4-205ENST00000550376 GPX1P07203 203 aa15.86■□□□□ 0.13
PRDM4-205ENST00000550376 KIR3DS1Q14943 382 aa15.86■□□□□ 0.13
PRDM4-205ENST00000550376 PMCHL1Q16048 86 aa15.86■□□□□ 0.13
PRDM4-205ENST00000550376 ZNF580Q9UK33 172 aa15.86■□□□□ 0.13
PRDM4-205ENST00000550376 ANK3Q12955 4377 aaKnown RBP15.86■□□□□ 0.13
PRDM4-205ENST00000550376 BMI1P35226 326 aa15.85■□□□□ 0.13
PRDM4-205ENST00000550376 RBAKDNA6NC62 111 aa15.85■□□□□ 0.13
PRDM4-205ENST00000550376 ESDP10768 282 aa15.85■□□□□ 0.13
PRDM4-205ENST00000550376 RNASEKQ6P5S7 137 aaKnown RBP15.85■□□□□ 0.13
PRDM4-205ENST00000550376 WNK1Q9H4A3 2382 aa15.85■□□□□ 0.13
PRDM4-205ENST00000550376 LOC102724200A0A096LPH7 203 aaPredicted RBP15.84■□□□□ 0.13
PRDM4-205ENST00000550376 KCNS1Q96KK3 526 aa15.84■□□□□ 0.13
PRDM4-205ENST00000550376 IGKV3D-20A0A0C4DH25 116 aa15.84■□□□□ 0.13
PRDM4-205ENST00000550376 DEFA6Q01524 100 aa15.84■□□□□ 0.13
PRDM4-205ENST00000550376 RIGQ13278 110 aa15.84■□□□□ 0.13
PRDM4-205ENST00000550376 C11orf44Q8N8P7 122 aa15.84■□□□□ 0.13
PRDM4-205ENST00000550376 URB1-AS1Q96HZ7 61 aa15.84■□□□□ 0.13
PRDM4-205ENST00000550376 CSN3P07498 182 aa15.83■□□□□ 0.13
PRDM4-205ENST00000550376 HIST1H1AQ02539 215 aaPredicted RBP15.83■□□□□ 0.13
PRDM4-205ENST00000550376 KHDC1LQ5JSQ8 128 aa15.83■□□□□ 0.13
PRDM4-205ENST00000550376 C9orf47Q6ZRZ4 202 aa15.83■□□□□ 0.13
PRDM4-205ENST00000550376 SPRY2O43597 315 aa15.83■□□□□ 0.12
PRDM4-205ENST00000550376 KRTAP1-1Q07627 177 aa15.83■□□□□ 0.12
PRDM4-205ENST00000550376 KLHDC1Q8N7A1 406 aa15.83■□□□□ 0.12
PRDM4-205ENST00000550376 FER1L6-AS1Q8NA97 138 aa15.83■□□□□ 0.12
PRDM4-205ENST00000550376 YAE1D1Q9NRH1 226 aa15.83■□□□□ 0.12
PRDM4-205ENST00000550376 FBLL1A6NHQ2 334 aaKnown RBP15.82■□□□□ 0.12
PRDM4-205ENST00000550376 PAFAH1B2P68402 229 aa15.82■□□□□ 0.12
PRDM4-205ENST00000550376 TWIST1Q15672 202 aa15.82■□□□□ 0.12
PRDM4-205ENST00000550376 NIT1Q86X76 327 aa15.82■□□□□ 0.12
PRDM4-205ENST00000550376 SMR3AQ99954 134 aa15.82■□□□□ 0.12
PRDM4-205ENST00000550376 ESM1Q9NQ30 184 aa15.82■□□□□ 0.12
PRDM4-205ENST00000550376 HOXD3P31249 432 aaPredicted RBP15.82■□□□□ 0.12
PRDM4-205ENST00000550376 AMN1Q8IY45 258 aa15.82■□□□□ 0.12
PRDM4-205ENST00000550376 CLEC5AQ9NY25 188 aa15.82■□□□□ 0.12
PRDM4-205ENST00000550376 LGALS1P09382 135 aaKnown RBP15.82■□□□□ 0.12
PRDM4-205ENST00000550376 KRTDAPP60985 99 aa15.82■□□□□ 0.12
PRDM4-205ENST00000550376 TCTEX1D4Q5JR98 221 aa15.82■□□□□ 0.12
PRDM4-205ENST00000550376 ZNF324O75467 553 aaPredicted RBP15.81■□□□□ 0.12
PRDM4-205ENST00000550376 ELANEP08246 267 aa15.81■□□□□ 0.12
PRDM4-205ENST00000550376 SLURP1P55000 103 aa15.81■□□□□ 0.12
PRDM4-205ENST00000550376 BORCS7Q96B45 105 aa15.81■□□□□ 0.12
PRDM4-205ENST00000550376 MRPL53Q96EL3 112 aaKnown RBP15.81■□□□□ 0.12
PRDM4-205ENST00000550376 NAGKQ9UJ70 344 aa15.81■□□□□ 0.12
PRDM4-205ENST00000550376 KLF5Q13887 457 aaPredicted RBP15.81■□□□□ 0.12
PRDM4-205ENST00000550376 TDRG1Q3Y452 100 aa15.81■□□□□ 0.12
PRDM4-205ENST00000550376 DNAJC9-AS1A6NH13 148 aa15.8■□□□□ 0.12
PRDM4-205ENST00000550376 TIMM8BQ9Y5J9 83 aaPredicted RBP15.8■□□□□ 0.12
PRDM4-205ENST00000550376 OTOGQ6ZRI0 2925 aa15.8■□□□□ 0.12
PRDM4-205ENST00000550376 K7EMT4 169 aa15.8■□□□□ 0.12
PRDM4-205ENST00000550376 OR10J6PQ8NGY7 276 aa15.8■□□□□ 0.12
PRDM4-205ENST00000550376 UBE2E2Q96LR5 201 aa15.8■□□□□ 0.12
PRDM4-205ENST00000550376 UFC1Q9Y3C8 167 aa15.8■□□□□ 0.12
PRDM4-205ENST00000550376 IGLC6P0CF74 106 aa15.79■□□□□ 0.12
PRDM4-205ENST00000550376 ZNF664Q8N3J9 261 aa15.79■□□□□ 0.12
PRDM4-205ENST00000550376 MYOZ3Q8TDC0 251 aa15.79■□□□□ 0.12
PRDM4-205ENST00000550376 AGRNO00468 2067 aa15.79■□□□□ 0.12
PRDM4-205ENST00000550376 A0A1B0GV90 55 aa15.79■□□□□ 0.12
PRDM4-205ENST00000550376 TMEM89A2RUT3 159 aa15.79■□□□□ 0.12
PRDM4-205ENST00000550376 SMKR1H3BMG3 65 aa15.79■□□□□ 0.12
PRDM4-205ENST00000550376 HSBP1O75506 76 aa15.79■□□□□ 0.12
PRDM4-205ENST00000550376 ZNF688P0C7X2 276 aa15.79■□□□□ 0.12
PRDM4-205ENST00000550376 DCANP1Q8TF63 244 aa15.79■□□□□ 0.12
PRDM4-205ENST00000550376 C14orf144Q96I85 54 aa15.79■□□□□ 0.12
PRDM4-205ENST00000550376 MS4A6AQ9H2W1 248 aa15.79■□□□□ 0.12
PRDM4-205ENST00000550376 Q6AWC8 147 aa15.78■□□□□ 0.12
PRDM4-205ENST00000550376 Q6ZSV7 163 aa15.78■□□□□ 0.12
PRDM4-205ENST00000550376 IGKV3-20P01619 116 aa15.78■□□□□ 0.12
PRDM4-205ENST00000550376 FOSL1P15407 271 aa15.78■□□□□ 0.12
PRDM4-205ENST00000550376 OR8A1Q8NGG7 326 aa15.78■□□□□ 0.12
PRDM4-205ENST00000550376 LINC01559Q495D7 138 aa15.77■□□□□ 0.12
PRDM4-205ENST00000550376 ZFAND2AQ8N6M9 145 aa15.77■□□□□ 0.12
PRDM4-205ENST00000550376 RNASE4P34096 147 aaKnown RBP15.77■□□□□ 0.11
PRDM4-205ENST00000550376 GAS8-AS1O95177 125 aa15.76■□□□□ 0.11
PRDM4-205ENST00000550376 Q8N2B8 174 aa15.76■□□□□ 0.11
PRDM4-205ENST00000550376 LOC389332A0A1B0GUA5 103 aa15.76■□□□□ 0.11
PRDM4-205ENST00000550376 D6R8Y8 96 aa15.76■□□□□ 0.11
PRDM4-205ENST00000550376 M0R2Z0 102 aa15.76■□□□□ 0.11
PRDM4-205ENST00000550376 OR11H1Q8NG94 326 aa15.76■□□□□ 0.11
PRDM4-205ENST00000550376 HIVEP2P31629 2446 aa15.76■□□□□ 0.11
PRDM4-205ENST00000550376 OVOL1O14753 267 aa15.75■□□□□ 0.11
PRDM4-205ENST00000550376 NCR2O95944 276 aa15.75■□□□□ 0.11
PRDM4-205ENST00000550376 CTRLP40313 264 aa15.75■□□□□ 0.11
PRDM4-205ENST00000550376 RPS20P60866 119 aaKnown RBP15.75■□□□□ 0.11
PRDM4-205ENST00000550376 PSMG4Q5JS54 123 aa15.75■□□□□ 0.11
PRDM4-205ENST00000550376 ADAMTSL5Q6ZMM2 481 aa15.75■□□□□ 0.11
PRDM4-205ENST00000550376 OR10AG1Q8NH19 301 aa15.75■□□□□ 0.11
PRDM4-205ENST00000550376 LINC00477Q96M19 166 aa15.75■□□□□ 0.11
PRDM4-205ENST00000550376 SETXQ7Z333 2677 aaKnown RBP15.74■□□□□ 0.11
PRDM4-205ENST00000550376 A0A1W2PRX2 142 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms