RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 ZFAND2AQ8N6M9 145 aa11.18□□□□□ -0.62
CHMP1A-206ENST00000549139 C16orf74Q96GX8 76 aa11.18□□□□□ -0.62
CHMP1A-206ENST00000549139 PYGO2Q9BRQ0 406 aa11.18□□□□□ -0.62
CHMP1A-206ENST00000549139 PLA2G2EQ9NZK7 142 aa11.18□□□□□ -0.62
CHMP1A-206ENST00000549139 hCG_2014768A0A024R1R8 64 aa11.17□□□□□ -0.62
CHMP1A-206ENST00000549139 PLAC8L1A1L4L8 177 aa11.17□□□□□ -0.62
CHMP1A-206ENST00000549139 TPT1P13693 172 aaKnown RBP11.17□□□□□ -0.62
CHMP1A-206ENST00000549139 SUMO1P63165 101 aaKnown RBP11.17□□□□□ -0.62
CHMP1A-206ENST00000549139 CD300CQ08708 224 aa11.17□□□□□ -0.62
CHMP1A-206ENST00000549139 ZNF767PQ75MW2 155 aa11.17□□□□□ -0.62
CHMP1A-206ENST00000549139 AKAP14Q86UN6 197 aa11.17□□□□□ -0.62
CHMP1A-206ENST00000549139 CCDC28AQ8IWP9 274 aa11.17□□□□□ -0.62
CHMP1A-206ENST00000549139 C5orf17Q8NAS9 161 aa11.17□□□□□ -0.62
CHMP1A-206ENST00000549139 TMEM263Q8WUH6 116 aaKnown RBP11.17□□□□□ -0.62
CHMP1A-206ENST00000549139 SERTM2A0A1B0GWG4 89 aa11.16□□□□□ -0.62
CHMP1A-206ENST00000549139 PRSS29PA6NIE9 313 aa11.16□□□□□ -0.62
CHMP1A-206ENST00000549139 LYRM9A8MSI8 78 aa11.16□□□□□ -0.62
CHMP1A-206ENST00000549139 RNASE4P34096 147 aaKnown RBP11.16□□□□□ -0.62
CHMP1A-206ENST00000549139 BTN1A1Q13410 526 aa11.16□□□□□ -0.62
CHMP1A-206ENST00000549139 GOLT1AQ6ZVE7 132 aa11.16□□□□□ -0.62
CHMP1A-206ENST00000549139 IQCF2Q8IXL9 164 aa11.16□□□□□ -0.62
CHMP1A-206ENST00000549139 Q8TAT8 98 aa11.16□□□□□ -0.62
CHMP1A-206ENST00000549139 STOML3Q8TAV4 291 aa11.16□□□□□ -0.62
CHMP1A-206ENST00000549139 RNASE8Q8TDE3 154 aaKnown RBP11.16□□□□□ -0.62
CHMP1A-206ENST00000549139 LINC00467Q9BRT7 94 aa11.16□□□□□ -0.62
CHMP1A-206ENST00000549139 TMPRSS5Q9H3S3 457 aa11.16□□□□□ -0.62
CHMP1A-206ENST00000549139 RPH3ALQ9UNE2 315 aa11.16□□□□□ -0.62
CHMP1A-206ENST00000549139 MAP1LC3B2A6NCE7 125 aa11.15□□□□□ -0.62
CHMP1A-206ENST00000549139 TCRAP04437 139 aa11.15□□□□□ -0.62
CHMP1A-206ENST00000549139 FGF8P55075 233 aaPredicted RBP11.15□□□□□ -0.62
CHMP1A-206ENST00000549139 GNG5P63218 68 aa11.15□□□□□ -0.62
CHMP1A-206ENST00000549139 DPPA3Q6W0C5 159 aa11.15□□□□□ -0.62
CHMP1A-206ENST00000549139 MBD3L1Q8WWY6 194 aa11.15□□□□□ -0.62
CHMP1A-206ENST00000549139 NKX6-2Q9C056 277 aaPredicted RBP11.15□□□□□ -0.62
CHMP1A-206ENST00000549139 MAP1LC3BQ9GZQ8 125 aa11.15□□□□□ -0.62
CHMP1A-206ENST00000549139 EPDR1Q9UM22 224 aa11.15□□□□□ -0.62
CHMP1A-206ENST00000549139 TIMM8BQ9Y5J9 83 aaPredicted RBP11.15□□□□□ -0.62
CHMP1A-206ENST00000549139 HERC1Q15751 4861 aa11.15□□□□□ -0.63
CHMP1A-206ENST00000549139 LRP1BQ9NZR2 4599 aa11.14□□□□□ -0.63
CHMP1A-206ENST00000549139 DEFB131BA0A096LNP1 70 aa11.14□□□□□ -0.63
CHMP1A-206ENST00000549139 FHITP49789 147 aa11.14□□□□□ -0.63
CHMP1A-206ENST00000549139 DAD1P61803 113 aa11.14□□□□□ -0.63
CHMP1A-206ENST00000549139 PRR9Q5T870 116 aa11.14□□□□□ -0.63
CHMP1A-206ENST00000549139 GGTLC3B5MD39 225 aa11.13□□□□□ -0.63
CHMP1A-206ENST00000549139 K7EQM0 130 aa11.13□□□□□ -0.63
CHMP1A-206ENST00000549139 ANXA2RQ3ZCQ2 193 aa11.13□□□□□ -0.63
CHMP1A-206ENST00000549139 EIF4E3Q8N5X7 224 aaKnown RBP11.13□□□□□ -0.63
CHMP1A-206ENST00000549139 IGHV4-4A0A075B6R2 117 aa11.12□□□□□ -0.63
CHMP1A-206ENST00000549139 TRAV8-1A0A0A6YYK1 113 aa11.12□□□□□ -0.63
CHMP1A-206ENST00000549139 FBLL1A6NHQ2 334 aaKnown RBP11.12□□□□□ -0.63
CHMP1A-206ENST00000549139 FAM74A7A6NL05 159 aa11.12□□□□□ -0.63
CHMP1A-206ENST00000549139 Q6AWC8 147 aa11.12□□□□□ -0.63
CHMP1A-206ENST00000549139 EIF5AL1Q6IS14 154 aaKnown RBP11.12□□□□□ -0.63
CHMP1A-206ENST00000549139 FAM213BQ8TBF2 198 aa11.12□□□□□ -0.63
CHMP1A-206ENST00000549139 IGHV1OR15-1A0A075B7D0 117 aa11.11□□□□□ -0.63
CHMP1A-206ENST00000549139 A0A1B0GVG6 124 aa11.11□□□□□ -0.63
CHMP1A-206ENST00000549139 SNURFLB1AK76 121 aa11.11□□□□□ -0.63
CHMP1A-206ENST00000549139 RGS13O14921 159 aa11.11□□□□□ -0.63
CHMP1A-206ENST00000549139 UBE2G2P60604 165 aa11.11□□□□□ -0.63
CHMP1A-206ENST00000549139 Q6ZQT7 251 aa11.11□□□□□ -0.63
CHMP1A-206ENST00000549139 SLC51BQ86UW2 128 aa11.11□□□□□ -0.63
CHMP1A-206ENST00000549139 CYB561D1Q8N8Q1 229 aa11.11□□□□□ -0.63
CHMP1A-206ENST00000549139 ZNF680Q8NEM1 530 aa11.11□□□□□ -0.63
CHMP1A-206ENST00000549139 SFT2D1Q8WV19 159 aa11.11□□□□□ -0.63
CHMP1A-206ENST00000549139 TVP23CQ96ET8 276 aa11.11□□□□□ -0.63
CHMP1A-206ENST00000549139 ATG101Q9BSB4 218 aa11.11□□□□□ -0.63
CHMP1A-206ENST00000549139 TREM1Q9NP99 234 aa11.11□□□□□ -0.63
CHMP1A-206ENST00000549139 NOP10Q9NPE3 64 aaKnown RBP11.11□□□□□ -0.63
CHMP1A-206ENST00000549139 PSG8Q9UQ74 426 aa11.11□□□□□ -0.63
CHMP1A-206ENST00000549139 CBY3A6NI87 242 aa11.1□□□□□ -0.63
CHMP1A-206ENST00000549139 IGLV2-11P01706 119 aa11.1□□□□□ -0.63
CHMP1A-206ENST00000549139 H2AFB1P0C5Y9 115 aa11.1□□□□□ -0.63
CHMP1A-206ENST00000549139 RAB5CP51148 216 aa11.1□□□□□ -0.63
CHMP1A-206ENST00000549139 ZNF575Q86XF7 245 aa11.1□□□□□ -0.63
CHMP1A-206ENST00000549139 TMEM75Q8N9X5 138 aa11.1□□□□□ -0.63
CHMP1A-206ENST00000549139 C11orf72Q8NBR9 251 aa11.1□□□□□ -0.63
CHMP1A-206ENST00000549139 SGK494Q96LW2 274 aa11.1□□□□□ -0.63
CHMP1A-206ENST00000549139 NDFIP1Q9BT67 221 aa11.1□□□□□ -0.63
CHMP1A-206ENST00000549139 ARL2-SNX15V9GYD0 113 aa11.1□□□□□ -0.63
CHMP1A-206ENST00000549139 IFNA7P01567 189 aa11.09□□□□□ -0.63
CHMP1A-206ENST00000549139 DEFB130BP0DP73 79 aa11.09□□□□□ -0.63
CHMP1A-206ENST00000549139 DEFB130AP0DP74 79 aa11.09□□□□□ -0.63
CHMP1A-206ENST00000549139 FLI1Q01543 452 aaPredicted RBP11.09□□□□□ -0.63
CHMP1A-206ENST00000549139 DAZ2Q13117 558 aaKnown RBP11.09□□□□□ -0.63
CHMP1A-206ENST00000549139 ZFP69Q49AA0 526 aa11.09□□□□□ -0.63
CHMP1A-206ENST00000549139 IBA57Q5T440 356 aaKnown RBP11.09□□□□□ -0.63
CHMP1A-206ENST00000549139 C9orf62Q8N4C0 152 aa11.09□□□□□ -0.63
CHMP1A-206ENST00000549139 LINC00612Q8N6U2 182 aa11.09□□□□□ -0.63
CHMP1A-206ENST00000549139 POM121L12Q8N7R1 296 aa11.09□□□□□ -0.63
CHMP1A-206ENST00000549139 HIST1H2BAQ96A08 127 aa11.09□□□□□ -0.63
CHMP1A-206ENST00000549139 FAM210BQ96KR6 192 aa11.09□□□□□ -0.63
CHMP1A-206ENST00000549139 APOBP04114 4563 aaKnown RBP11.09□□□□□ -0.63
CHMP1A-206ENST00000549139 TRAV21A0A0B4J279 112 aa11.08□□□□□ -0.64
CHMP1A-206ENST00000549139 SULT1A2P50226 295 aa11.08□□□□□ -0.64
CHMP1A-206ENST00000549139 TCEAL7Q9BRU2 100 aa11.08□□□□□ -0.64
CHMP1A-206ENST00000549139 GSN-AS1Q9NRJ2 163 aa11.08□□□□□ -0.64
CHMP1A-206ENST00000549139 TP53TG3Q9ULZ0 132 aa11.08□□□□□ -0.64
CHMP1A-206ENST00000549139 F6UZH7 168 aa11.07□□□□□ -0.64
CHMP1A-206ENST00000549139 M0R2N4 97 aa11.07□□□□□ -0.64
CHMP1A-206ENST00000549139 PEX7O00628 323 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms