RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 H3BUX3 64 aa10.58□□□□□ -0.72
PRPF40B-209ENST00000548825 IGHV4-38-2P0DP08 117 aa10.58□□□□□ -0.72
PRPF40B-209ENST00000548825 BLCAPP62952 87 aa10.58□□□□□ -0.72
PRPF40B-209ENST00000548825 AGRNO00468 2067 aa10.57□□□□□ -0.72
PRPF40B-209ENST00000548825 MRPS12O15235 138 aaKnown RBP10.57□□□□□ -0.72
PRPF40B-209ENST00000548825 MGPP08493 103 aa10.57□□□□□ -0.72
PRPF40B-209ENST00000548825 FCER1GP30273 86 aa10.57□□□□□ -0.72
PRPF40B-209ENST00000548825 LEPP41159 167 aa10.57□□□□□ -0.72
PRPF40B-209ENST00000548825 HIST1H1AQ02539 215 aaPredicted RBP10.57□□□□□ -0.72
PRPF40B-209ENST00000548825 DKK2Q9UBU2 259 aa10.57□□□□□ -0.72
PRPF40B-209ENST00000548825 NF1P21359 2839 aa10.57□□□□□ -0.72
PRPF40B-209ENST00000548825 IGHV4-61A0A0C4DH41 118 aa10.57□□□□□ -0.72
PRPF40B-209ENST00000548825 NPIPB6E9PJ23 425 aa10.57□□□□□ -0.72
PRPF40B-209ENST00000548825 CCL25O15444 150 aa10.57□□□□□ -0.72
PRPF40B-209ENST00000548825 ANKRD39Q53RE8 183 aa10.57□□□□□ -0.72
PRPF40B-209ENST00000548825 HIST2H2BDQ6DRA6 164 aa10.57□□□□□ -0.72
PRPF40B-209ENST00000548825 SMIM12Q96EX1 92 aa10.57□□□□□ -0.72
PRPF40B-209ENST00000548825 CCDC140Q96MF4 163 aa10.57□□□□□ -0.72
PRPF40B-209ENST00000548825 ZNF747Q9BV97 191 aa10.57□□□□□ -0.72
PRPF40B-209ENST00000548825 AGPAT4-IT1Q9H0P7 198 aa10.57□□□□□ -0.72
PRPF40B-209ENST00000548825 CENPVL3A0A0U1RRI6 287 aa10.56□□□□□ -0.72
PRPF40B-209ENST00000548825 KIR3DS1Q14943 382 aa10.56□□□□□ -0.72
PRPF40B-209ENST00000548825 FBXL19-AS1Q494R0 122 aa10.56□□□□□ -0.72
PRPF40B-209ENST00000548825 UNQ9165/PRO28630Q6UXU0 137 aa10.56□□□□□ -0.72
PRPF40B-209ENST00000548825 EEF1AKMT3Q96AZ1 226 aa10.56□□□□□ -0.72
PRPF40B-209ENST00000548825 SIRPDQ9H106 197 aa10.56□□□□□ -0.72
PRPF40B-209ENST00000548825 FBN2P35556 2912 aa10.56□□□□□ -0.72
PRPF40B-209ENST00000548825 ARL3P36405 182 aa10.56□□□□□ -0.72
PRPF40B-209ENST00000548825 UBE2E1P51965 193 aa10.56□□□□□ -0.72
PRPF40B-209ENST00000548825 Q6ZS46 218 aa10.56□□□□□ -0.72
PRPF40B-209ENST00000548825 TEX15Q9BXT5 2789 aa10.56□□□□□ -0.72
PRPF40B-209ENST00000548825 IGHV4-39P01824 125 aa10.56□□□□□ -0.72
PRPF40B-209ENST00000548825 LYPD1Q8N2G4 141 aa10.56□□□□□ -0.72
PRPF40B-209ENST00000548825 AP1S3Q96PC3 154 aa10.56□□□□□ -0.72
PRPF40B-209ENST00000548825 BUB3O43684 328 aa10.55□□□□□ -0.72
PRPF40B-209ENST00000548825 C8orf86Q6ZUL3 223 aa10.55□□□□□ -0.72
PRPF40B-209ENST00000548825 TMEM160Q9NX00 188 aa10.55□□□□□ -0.72
PRPF40B-209ENST00000548825 PRRC2AP48634 2157 aaKnown RBP10.55□□□□□ -0.72
PRPF40B-209ENST00000548825 TRAV41A0A0B4J266 112 aa10.55□□□□□ -0.72
PRPF40B-209ENST00000548825 LMO4P61968 165 aa10.55□□□□□ -0.72
PRPF40B-209ENST00000548825 PAX8Q06710 450 aa10.55□□□□□ -0.72
PRPF40B-209ENST00000548825 MINOS1Q5TGZ0 78 aa10.55□□□□□ -0.72
PRPF40B-209ENST00000548825 AMMECR1LQ6DCA0 310 aa10.55□□□□□ -0.72
PRPF40B-209ENST00000548825 SMIM15Q7Z3B0 74 aa10.55□□□□□ -0.72
PRPF40B-209ENST00000548825 PCP2Q8IVA1 136 aa10.55□□□□□ -0.72
PRPF40B-209ENST00000548825 ZNF502Q8TBZ5 544 aa10.55□□□□□ -0.72
PRPF40B-209ENST00000548825 IFI27L1Q96BM0 104 aa10.55□□□□□ -0.72
PRPF40B-209ENST00000548825 MINOS1-NBL1R4GNA1 71 aa10.55□□□□□ -0.72
PRPF40B-209ENST00000548825 PDE6HQ13956 83 aa10.54□□□□□ -0.72
PRPF40B-209ENST00000548825 CCL19Q99731 98 aa10.54□□□□□ -0.72
PRPF40B-209ENST00000548825 FOXC2Q99958 501 aa10.54□□□□□ -0.72
PRPF40B-209ENST00000548825 C16orf54Q6UWD8 224 aa10.54□□□□□ -0.72
PRPF40B-209ENST00000548825 MAP1LC3AQ9H492 121 aa10.54□□□□□ -0.72
PRPF40B-209ENST00000548825 FAM231BA6NCW3 169 aa10.53□□□□□ -0.72
PRPF40B-209ENST00000548825 FBLL1A6NHQ2 334 aaKnown RBP10.53□□□□□ -0.72
PRPF40B-209ENST00000548825 HBDP02042 147 aa10.53□□□□□ -0.72
PRPF40B-209ENST00000548825 RNASE4P34096 147 aaKnown RBP10.53□□□□□ -0.72
PRPF40B-209ENST00000548825 PET117Q6UWS5 81 aa10.53□□□□□ -0.72
PRPF40B-209ENST00000548825 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.53□□□□□ -0.72
PRPF40B-209ENST00000548825 SRSF8Q9BRL6 282 aaKnown RBP10.53□□□□□ -0.72
PRPF40B-209ENST00000548825 TRAV8-6A0A0B4J262 113 aa10.53□□□□□ -0.72
PRPF40B-209ENST00000548825 IGHG4P01861 327 aa10.53□□□□□ -0.72
PRPF40B-209ENST00000548825 EDN2P20800 178 aa10.53□□□□□ -0.72
PRPF40B-209ENST00000548825 PCP4P48539 62 aa10.53□□□□□ -0.72
PRPF40B-209ENST00000548825 NEGR1Q7Z3B1 354 aa10.53□□□□□ -0.72
PRPF40B-209ENST00000548825 GTSCR1Q86UQ5 136 aa10.53□□□□□ -0.72
PRPF40B-209ENST00000548825 FAM110DQ8TAY7 271 aaPredicted RBP10.53□□□□□ -0.72
PRPF40B-209ENST00000548825 ITLN2Q8WWU7 325 aaPredicted RBP10.53□□□□□ -0.72
PRPF40B-209ENST00000548825 ST20Q9HBF5 79 aa10.53□□□□□ -0.72
PRPF40B-209ENST00000548825 C11orf21Q9P2W6 132 aa10.53□□□□□ -0.72
PRPF40B-209ENST00000548825 COX11Q9Y6N1 276 aa10.53□□□□□ -0.72
PRPF40B-209ENST00000548825 K7EP13 123 aa10.52□□□□□ -0.73
PRPF40B-209ENST00000548825 SMAD7O15105 426 aaKnown RBP10.52□□□□□ -0.73
PRPF40B-209ENST00000548825 DTX2Q86UW9 622 aa10.52□□□□□ -0.73
PRPF40B-209ENST00000548825 HIVEP2P31629 2446 aa10.52□□□□□ -0.73
PRPF40B-209ENST00000548825 TNFRSF6BO95407 300 aa10.52□□□□□ -0.73
PRPF40B-209ENST00000548825 GCSHP23434 173 aa10.52□□□□□ -0.73
PRPF40B-209ENST00000548825 TMEM158Q8WZ71 300 aa10.52□□□□□ -0.73
PRPF40B-209ENST00000548825 MRPS16Q9Y3D3 137 aaKnown RBP10.52□□□□□ -0.73
PRPF40B-209ENST00000548825 OVOL3O00110 214 aa10.51□□□□□ -0.73
PRPF40B-209ENST00000548825 PRB1P04280 392 aa10.51□□□□□ -0.73
PRPF40B-209ENST00000548825 Q6AWC8 147 aa10.51□□□□□ -0.73
PRPF40B-209ENST00000548825 MXRA5Q9NR99 2828 aa10.51□□□□□ -0.73
PRPF40B-209ENST00000548825 F5H697 171 aa10.51□□□□□ -0.73
PRPF40B-209ENST00000548825 CLEC2AQ6UVW9 174 aa10.51□□□□□ -0.73
PRPF40B-209ENST00000548825 C14orf178Q8N769 122 aaPredicted RBP10.51□□□□□ -0.73
PRPF40B-209ENST00000548825 PPP1R14DQ9NXH3 145 aa10.51□□□□□ -0.73
PRPF40B-209ENST00000548825 IGHV4-30-2A0A087WSY4 118 aa10.51□□□□□ -0.73
PRPF40B-209ENST00000548825 IGKV3D-20A0A0C4DH25 116 aa10.51□□□□□ -0.73
PRPF40B-209ENST00000548825 KHDC1LQ5JSQ8 128 aa10.51□□□□□ -0.73
PRPF40B-209ENST00000548825 BVES-AS1Q5T3Y7 98 aa10.51□□□□□ -0.73
PRPF40B-209ENST00000548825 C10orf99Q6UWK7 81 aa10.51□□□□□ -0.73
PRPF40B-209ENST00000548825 EMP1P54849 157 aa10.5□□□□□ -0.73
PRPF40B-209ENST00000548825 FAM74A4Q5TZK3 123 aa10.5□□□□□ -0.73
PRPF40B-209ENST00000548825 Q8N6K4 173 aa10.5□□□□□ -0.73
PRPF40B-209ENST00000548825 FN1P02751 2386 aaKnown RBP10.5□□□□□ -0.73
PRPF40B-209ENST00000548825 A0A096LNJ9 63 aa10.5□□□□□ -0.73
PRPF40B-209ENST00000548825 C5orf56Q8N8D9 126 aa10.5□□□□□ -0.73
PRPF40B-209ENST00000548825 SVIPQ8NHG7 77 aa10.5□□□□□ -0.73
PRPF40B-209ENST00000548825 ZFAND3Q9H8U3 227 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms