RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 SIGLEC8Q9NYZ4 499 aa12.33□□□□□ -0.44
HMGA2-210ENST00000541363 ETV2O00321 342 aaPredicted RBP12.33□□□□□ -0.44
HMGA2-210ENST00000541363 PRSS47A8MTI9 375 aa12.33□□□□□ -0.44
HMGA2-210ENST00000541363 CFC1BP0CG36 223 aa12.33□□□□□ -0.44
HMGA2-210ENST00000541363 CFC1P0CG37 223 aa12.33□□□□□ -0.44
HMGA2-210ENST00000541363 YPEL3P61236 119 aaPredicted RBP12.33□□□□□ -0.44
HMGA2-210ENST00000541363 ZDBF2Q9HCK1 2354 aa12.32□□□□□ -0.44
HMGA2-210ENST00000541363 IGKV1-12A0A0C4DH73 117 aa12.32□□□□□ -0.44
HMGA2-210ENST00000541363 SMIM27A0A1W2PRY6 76 aa12.32□□□□□ -0.44
HMGA2-210ENST00000541363 C9JQL5 133 aa12.32□□□□□ -0.44
HMGA2-210ENST00000541363 ATP6V0E1O15342 81 aa12.32□□□□□ -0.44
HMGA2-210ENST00000541363 IGKV1D-12P01611 117 aa12.32□□□□□ -0.44
HMGA2-210ENST00000541363 NPSP0C0P6 89 aa12.32□□□□□ -0.44
HMGA2-210ENST00000541363 CRYGSP22914 178 aa12.32□□□□□ -0.44
HMGA2-210ENST00000541363 PYGO2Q9BRQ0 406 aa12.32□□□□□ -0.44
HMGA2-210ENST00000541363 GNLYP22749 145 aa12.32□□□□□ -0.44
HMGA2-210ENST00000541363 IGKV3D-7A0A0C4DH55 119 aa12.32□□□□□ -0.44
HMGA2-210ENST00000541363 Q9H8V8 135 aa12.32□□□□□ -0.44
HMGA2-210ENST00000541363 TRBV6-6A0A0A6YYG2 114 aa12.32□□□□□ -0.44
HMGA2-210ENST00000541363 ZFP2Q6ZN57 461 aa12.32□□□□□ -0.44
HMGA2-210ENST00000541363 MRPL53Q96EL3 112 aaKnown RBP12.32□□□□□ -0.44
HMGA2-210ENST00000541363 IGKV4-1P06312 121 aa12.32□□□□□ -0.44
HMGA2-210ENST00000541363 BPESC1Q9GZL8 116 aa12.32□□□□□ -0.44
HMGA2-210ENST00000541363 NDUFA4O00483 81 aa12.31□□□□□ -0.44
HMGA2-210ENST00000541363 MESP1Q9BRJ9 268 aa12.31□□□□□ -0.44
HMGA2-210ENST00000541363 PLXND1Q9Y4D7 1925 aa12.31□□□□□ -0.44
HMGA2-210ENST00000541363 MSMBP08118 114 aa12.31□□□□□ -0.44
HMGA2-210ENST00000541363 TRAV4A0A0B4J268 109 aa12.31□□□□□ -0.44
HMGA2-210ENST00000541363 A0A0G2JNJ9 132 aa12.31□□□□□ -0.44
HMGA2-210ENST00000541363 RUSC1-AS1Q66K80 236 aa12.31□□□□□ -0.44
HMGA2-210ENST00000541363 Q9UFV3 132 aa12.31□□□□□ -0.44
HMGA2-210ENST00000541363 H0YGX0 51 aa12.31□□□□□ -0.44
HMGA2-210ENST00000541363 Q6ZQT7 251 aa12.31□□□□□ -0.44
HMGA2-210ENST00000541363 TEX22C9J3V5 150 aa12.3□□□□□ -0.44
HMGA2-210ENST00000541363 RNF183Q96D59 192 aa12.3□□□□□ -0.44
HMGA2-210ENST00000541363 H0Y9J4 135 aa12.3□□□□□ -0.44
HMGA2-210ENST00000541363 J3QRE1 110 aa12.3□□□□□ -0.44
HMGA2-210ENST00000541363 IGKV1-27A0A075B6S5 117 aa12.3□□□□□ -0.44
HMGA2-210ENST00000541363 FOXE3Q13461 319 aa12.3□□□□□ -0.44
HMGA2-210ENST00000541363 CAMK2N2Q96S95 79 aa12.3□□□□□ -0.44
HMGA2-210ENST00000541363 OPRPNQ99935 248 aaPredicted RBP12.3□□□□□ -0.44
HMGA2-210ENST00000541363 TNRC6BQ9UPQ9 1833 aaKnown RBP12.3□□□□□ -0.44
HMGA2-210ENST00000541363 FAM236AA0A1B0GUQ0 79 aa12.3□□□□□ -0.44
HMGA2-210ENST00000541363 FAM236BA0A1B0GV22 79 aa12.3□□□□□ -0.44
HMGA2-210ENST00000541363 K7EMI3 77 aa12.3□□□□□ -0.44
HMGA2-210ENST00000541363 UBE2E1P51965 193 aa12.3□□□□□ -0.44
HMGA2-210ENST00000541363 Q6P435 159 aa12.3□□□□□ -0.44
HMGA2-210ENST00000541363 IGLV3-12A0A075B6K2 115 aa12.29□□□□□ -0.44
HMGA2-210ENST00000541363 ZNF493Q6ZR52 646 aa12.29□□□□□ -0.44
HMGA2-210ENST00000541363 NOP10Q9NPE3 64 aaKnown RBP12.29□□□□□ -0.44
HMGA2-210ENST00000541363 SBF1O95248 1867 aa12.29□□□□□ -0.44
HMGA2-210ENST00000541363 TRBV19A0A075B6N1 114 aa12.29□□□□□ -0.44
HMGA2-210ENST00000541363 PINLYPA6NC86 204 aa12.29□□□□□ -0.44
HMGA2-210ENST00000541363 REG4Q9BYZ8 158 aa12.29□□□□□ -0.44
HMGA2-210ENST00000541363 EML5Q05BV3 1969 aa12.29□□□□□ -0.44
HMGA2-210ENST00000541363 RNF223E7ERA6 249 aa12.29□□□□□ -0.44
HMGA2-210ENST00000541363 CFHR1Q03591 330 aa12.29□□□□□ -0.44
HMGA2-210ENST00000541363 LINC01620Q4KN68 170 aa12.28□□□□□ -0.44
HMGA2-210ENST00000541363 DEFB125Q8N687 156 aa12.28□□□□□ -0.44
HMGA2-210ENST00000541363 COL8A2P25067 703 aa12.28□□□□□ -0.44
HMGA2-210ENST00000541363 TEX36Q5VZQ5 186 aa12.28□□□□□ -0.44
HMGA2-210ENST00000541363 LYPD2Q6UXB3 125 aa12.28□□□□□ -0.44
HMGA2-210ENST00000541363 A0A0J9YY99 117 aa12.28□□□□□ -0.44
HMGA2-210ENST00000541363 MLANAQ16655 118 aa12.28□□□□□ -0.44
HMGA2-210ENST00000541363 IGKV1-16P04430 117 aa12.27□□□□□ -0.44
HMGA2-210ENST00000541363 AMTNQ6UX39 209 aa12.27□□□□□ -0.44
HMGA2-210ENST00000541363 IGLL1P15814 213 aa12.27□□□□□ -0.44
HMGA2-210ENST00000541363 CSRP1P21291 193 aaKnown RBP12.27□□□□□ -0.44
HMGA2-210ENST00000541363 GFI1Q99684 422 aa12.27□□□□□ -0.44
HMGA2-210ENST00000541363 PRR15LQ9BU68 103 aa12.27□□□□□ -0.44
HMGA2-210ENST00000541363 SPTA1P02549 2419 aa12.27□□□□□ -0.44
HMGA2-210ENST00000541363 IL15RAQ13261 267 aa12.27□□□□□ -0.44
HMGA2-210ENST00000541363 PRR25Q96S07 402 aa12.27□□□□□ -0.44
HMGA2-210ENST00000541363 TMEM14BQ9NUH8 114 aa12.27□□□□□ -0.44
HMGA2-210ENST00000541363 ICOSQ9Y6W8 199 aa12.27□□□□□ -0.44
HMGA2-210ENST00000541363 BRCA1P38398 1863 aaKnown RBP12.27□□□□□ -0.45
HMGA2-210ENST00000541363 LTAP01374 205 aa12.27□□□□□ -0.45
HMGA2-210ENST00000541363 ZFP36L1Q07352 338 aaKnown RBP12.27□□□□□ -0.45
HMGA2-210ENST00000541363 NDUFS7O75251 213 aa12.27□□□□□ -0.45
HMGA2-210ENST00000541363 GGNQ86UU5 652 aa12.27□□□□□ -0.45
HMGA2-210ENST00000541363 SEM1Q6ZVN7 128 aa12.26□□□□□ -0.45
HMGA2-210ENST00000541363 TANC2Q9HCD6 1990 aa12.26□□□□□ -0.45
HMGA2-210ENST00000541363 IGHV1-69DA0A0B4J2H0 117 aa12.26□□□□□ -0.45
HMGA2-210ENST00000541363 IGHV1-69P01742 117 aa12.26□□□□□ -0.45
HMGA2-210ENST00000541363 A0A1B0GUS0 222 aa12.26□□□□□ -0.45
HMGA2-210ENST00000541363 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.26□□□□□ -0.45
HMGA2-210ENST00000541363 IGKV2-29A2NJV5 120 aaPredicted RBP12.26□□□□□ -0.45
HMGA2-210ENST00000541363 COX7A2LO14548 114 aa12.26□□□□□ -0.45
HMGA2-210ENST00000541363 Q6ZWC4 215 aa12.26□□□□□ -0.45
HMGA2-210ENST00000541363 SPTBN2O15020 2390 aa12.26□□□□□ -0.45
HMGA2-210ENST00000541363 IGKV1D-17A0A075B6S4 117 aa12.26□□□□□ -0.45
HMGA2-210ENST00000541363 SH2D6Q7Z4S9 175 aa12.26□□□□□ -0.45
HMGA2-210ENST00000541363 Q96MF0 132 aa12.26□□□□□ -0.45
HMGA2-210ENST00000541363 TMEM14CQ9P0S9 112 aa12.26□□□□□ -0.45
HMGA2-210ENST00000541363 A0A087WV48 116 aa12.25□□□□□ -0.45
HMGA2-210ENST00000541363 CCL18P55774 89 aa12.25□□□□□ -0.45
HMGA2-210ENST00000541363 WIPF2Q8TF74 440 aaPredicted RBP12.25□□□□□ -0.45
HMGA2-210ENST00000541363 C5orf63A6NC05 138 aa12.25□□□□□ -0.45
HMGA2-210ENST00000541363 EPOPA6NHQ4 379 aa12.25□□□□□ -0.45
HMGA2-210ENST00000541363 H3BRN7 92 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms