RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 CKS2P33552 79 aa4.16□□□□□ -1.74
PROM1-220ENST00000540805 SSBP2P81877 361 aaPredicted RBP4.16□□□□□ -1.74
PROM1-220ENST00000540805 FHL3Q13643 280 aa4.16□□□□□ -1.74
PROM1-220ENST00000540805 ADIPOQQ15848 244 aa4.16□□□□□ -1.74
PROM1-220ENST00000540805 UTF1Q5T230 341 aa4.16□□□□□ -1.74
PROM1-220ENST00000540805 PATE2Q6UY27 113 aa4.16□□□□□ -1.74
PROM1-220ENST00000540805 OR5A1Q8NGJ0 315 aa4.16□□□□□ -1.74
PROM1-220ENST00000540805 PGPEP1Q9NXJ5 209 aa4.16□□□□□ -1.74
PROM1-220ENST00000540805 JKAMPQ9P055 326 aa4.16□□□□□ -1.74
PROM1-220ENST00000540805 ZNRD1Q9P1U0 126 aa4.16□□□□□ -1.74
PROM1-220ENST00000540805 C19orf71A6NCJ1 209 aa4.16□□□□□ -1.74
PROM1-220ENST00000540805 CYSRT1A8MQ03 144 aa4.16□□□□□ -1.74
PROM1-220ENST00000540805 APOHP02749 345 aaPredicted RBP4.16□□□□□ -1.74
PROM1-220ENST00000540805 RNASE1P07998 156 aaKnown RBP4.16□□□□□ -1.74
PROM1-220ENST00000540805 MYCNOSP40205 109 aa4.16□□□□□ -1.74
PROM1-220ENST00000540805 DLX6P56179 175 aa4.16□□□□□ -1.74
PROM1-220ENST00000540805 SRSF9Q13242 221 aaKnown RBP eCLIP4.16□□□□□ -1.74
PROM1-220ENST00000540805 C17orf58Q2M2W7 97 aa4.16□□□□□ -1.74
PROM1-220ENST00000540805 LINC00322Q6ZN03 302 aaPredicted RBP4.16□□□□□ -1.74
PROM1-220ENST00000540805 OSR1Q8TAX0 266 aaPredicted RBP4.16□□□□□ -1.74
PROM1-220ENST00000540805 ZNF479Q96JC4 524 aa4.16□□□□□ -1.74
PROM1-220ENST00000540805 DUX3Q96PT4 197 aa4.16□□□□□ -1.74
PROM1-220ENST00000540805 MLST8Q9BVC4 326 aa4.16□□□□□ -1.74
PROM1-220ENST00000540805 KLF12Q9Y4X4 402 aa4.16□□□□□ -1.74
PROM1-220ENST00000540805 H7C2G1 150 aa4.16□□□□□ -1.74
PROM1-220ENST00000540805 SCGB1A1P11684 91 aa4.16□□□□□ -1.74
PROM1-220ENST00000540805 C19orf54Q5BKX5 351 aa4.16□□□□□ -1.74
PROM1-220ENST00000540805 RUSC1-AS1Q66K80 236 aa4.16□□□□□ -1.74
PROM1-220ENST00000540805 ZNF747Q9BV97 191 aa4.16□□□□□ -1.74
PROM1-220ENST00000540805 SRRM4A7MD48 611 aaKnown RBP4.15□□□□□ -1.74
PROM1-220ENST00000540805 M0R3E3 92 aa4.15□□□□□ -1.74
PROM1-220ENST00000540805 UBE2L6O14933 153 aa4.15□□□□□ -1.74
PROM1-220ENST00000540805 LTAP01374 205 aa4.15□□□□□ -1.74
PROM1-220ENST00000540805 IGKV1-16P04430 117 aa4.15□□□□□ -1.74
PROM1-220ENST00000540805 ZNF688P0C7X2 276 aa4.15□□□□□ -1.74
PROM1-220ENST00000540805 PIP4P2Q8N4L2 257 aa4.15□□□□□ -1.74
PROM1-220ENST00000540805 FAM110DQ8TAY7 271 aaPredicted RBP4.15□□□□□ -1.74
PROM1-220ENST00000540805 RPUSD1Q9UJJ7 312 aaKnown RBP4.15□□□□□ -1.74
PROM1-220ENST00000540805 COL12A1Q99715 3063 aa4.15□□□□□ -1.74
PROM1-220ENST00000540805 A0A1W2PPM0 123 aa4.15□□□□□ -1.74
PROM1-220ENST00000540805 CGB3P0DN86 165 aa4.15□□□□□ -1.74
PROM1-220ENST00000540805 CGB7P0DN87 165 aa4.15□□□□□ -1.74
PROM1-220ENST00000540805 FGF6P10767 208 aa4.15□□□□□ -1.74
PROM1-220ENST00000540805 RPL35AP18077 110 aaKnown RBP4.15□□□□□ -1.74
PROM1-220ENST00000540805 LOXL1Q08397 574 aaPredicted RBP4.15□□□□□ -1.74
PROM1-220ENST00000540805 CD300EQ496F6 205 aaPredicted RBP4.15□□□□□ -1.74
PROM1-220ENST00000540805 OR9G4Q8NGQ1 327 aa4.15□□□□□ -1.74
PROM1-220ENST00000540805 CELSR1Q9NYQ6 3014 aa4.15□□□□□ -1.75
PROM1-220ENST00000540805 SNCGO76070 127 aa4.15□□□□□ -1.75
PROM1-220ENST00000540805 NDPQ00604 133 aa4.15□□□□□ -1.75
PROM1-220ENST00000540805 VMO1Q7Z5L0 202 aa4.15□□□□□ -1.75
PROM1-220ENST00000540805 THAP8Q8NA92 274 aa4.15□□□□□ -1.75
PROM1-220ENST00000540805 OR5AN1Q8NGI8 311 aa4.15□□□□□ -1.75
PROM1-220ENST00000540805 NDUFA4L2Q9NRX3 87 aa4.15□□□□□ -1.75
PROM1-220ENST00000540805 TOMM7Q9P0U1 55 aa4.15□□□□□ -1.75
PROM1-220ENST00000540805 CRYBG3Q68DQ2 2970 aa4.15□□□□□ -1.75
PROM1-220ENST00000540805 A0A1B0GW15 77 aa4.14□□□□□ -1.75
PROM1-220ENST00000540805 MBD3L4A6NDZ8 208 aaPredicted RBP4.14□□□□□ -1.75
PROM1-220ENST00000540805 MBD3L3A6NE82 208 aaPredicted RBP4.14□□□□□ -1.75
PROM1-220ENST00000540805 MBD3L5A6NJ08 208 aaPredicted RBP4.14□□□□□ -1.75
PROM1-220ENST00000540805 NPIPB6E9PJ23 425 aa4.14□□□□□ -1.75
PROM1-220ENST00000540805 TMEM178BH3BS89 294 aa4.14□□□□□ -1.75
PROM1-220ENST00000540805 FSTL3O95633 263 aa4.14□□□□□ -1.75
PROM1-220ENST00000540805 TCRAP04437 139 aa4.14□□□□□ -1.75
PROM1-220ENST00000540805 PSMB2P49721 201 aa4.14□□□□□ -1.75
PROM1-220ENST00000540805 FXYD2P54710 66 aa4.14□□□□□ -1.75
PROM1-220ENST00000540805 TMEM200BQ69YZ2 307 aa4.14□□□□□ -1.75
PROM1-220ENST00000540805 Q86TA4 180 aa4.14□□□□□ -1.75
PROM1-220ENST00000540805 FAM169BQ8N8A8 192 aa4.14□□□□□ -1.75
PROM1-220ENST00000540805 KLHL30-AS1Q8NEE0 82 aa4.14□□□□□ -1.75
PROM1-220ENST00000540805 MBD3L2Q8NHZ7 208 aaPredicted RBP4.14□□□□□ -1.75
PROM1-220ENST00000540805 PTH2Q96A98 100 aa4.14□□□□□ -1.75
PROM1-220ENST00000540805 UBE2E2Q96LR5 201 aa4.14□□□□□ -1.75
PROM1-220ENST00000540805 Q9H3A6 140 aa4.14□□□□□ -1.75
PROM1-220ENST00000540805 CELSR2Q9HCU4 2923 aa4.14□□□□□ -1.75
PROM1-220ENST00000540805 IGKV1D-37A0A075B6S9 117 aa4.14□□□□□ -1.75
PROM1-220ENST00000540805 A0A1B0GUT8 65 aa4.14□□□□□ -1.75
PROM1-220ENST00000540805 FABP2P12104 132 aa4.14□□□□□ -1.75
PROM1-220ENST00000540805 TENM4Q6N022 2769 aa4.14□□□□□ -1.75
PROM1-220ENST00000540805 STHQ8IWL8 128 aa4.14□□□□□ -1.75
PROM1-220ENST00000540805 MYOZ3Q8TDC0 251 aa4.14□□□□□ -1.75
PROM1-220ENST00000540805 TRBV20-1A0A075B6N2 111 aa4.14□□□□□ -1.75
PROM1-220ENST00000540805 IGKV3D-20A0A0C4DH25 116 aa4.14□□□□□ -1.75
PROM1-220ENST00000540805 GCSHP23434 173 aa4.14□□□□□ -1.75
PROM1-220ENST00000540805 SAA4P35542 130 aa4.14□□□□□ -1.75
PROM1-220ENST00000540805 NMUP48645 174 aa4.14□□□□□ -1.75
PROM1-220ENST00000540805 C15orf32Q32M92 178 aa4.14□□□□□ -1.75
PROM1-220ENST00000540805 LGALS9BQ3B8N2 356 aa4.14□□□□□ -1.75
PROM1-220ENST00000540805 LGALS9CQ6DKI2 356 aa4.14□□□□□ -1.75
PROM1-220ENST00000540805 SLC25A48Q6ZT89 311 aaKnown RBP4.14□□□□□ -1.75
PROM1-220ENST00000540805 ZNF256Q9Y2P7 627 aaPredicted RBP4.14□□□□□ -1.75
PROM1-220ENST00000540805 INS-IGF2F8WCM5 200 aa4.14□□□□□ -1.75
PROM1-220ENST00000540805 ARMS2P0C7Q2 107 aa4.14□□□□□ -1.75
PROM1-220ENST00000540805 RNASE4P34096 147 aaKnown RBP4.14□□□□□ -1.75
PROM1-220ENST00000540805 SUMO2P61956 95 aaKnown RBP4.14□□□□□ -1.75
PROM1-220ENST00000540805 PSMG4Q5JS54 123 aa4.14□□□□□ -1.75
PROM1-220ENST00000540805 SAMD5Q5TGI4 173 aa4.14□□□□□ -1.75
PROM1-220ENST00000540805 IGFL3Q6UXB1 125 aa4.14□□□□□ -1.75
PROM1-220ENST00000540805 CIARTQ8N365 385 aaPredicted RBP4.14□□□□□ -1.75
PROM1-220ENST00000540805 IGFBPL1Q8WX77 278 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms