RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 TMEM155Q4W5P6 130 aa10.03□□□□□ -0.8
SFSWAP-209ENST00000540469 Q8N8P6 123 aa10.03□□□□□ -0.8
SFSWAP-209ENST00000540469 HIF1ANQ9NWT6 349 aa10.03□□□□□ -0.8
SFSWAP-209ENST00000540469 MFAP4P55083 255 aa10.03□□□□□ -0.8
SFSWAP-209ENST00000540469 FOXI1Q12951 378 aa10.03□□□□□ -0.8
SFSWAP-209ENST00000540469 ERCC8Q13216 396 aa10.03□□□□□ -0.8
SFSWAP-209ENST00000540469 LINC01559Q495D7 138 aa10.03□□□□□ -0.8
SFSWAP-209ENST00000540469 SPANXN1Q5VSR9 72 aa10.03□□□□□ -0.8
SFSWAP-209ENST00000540469 DLX4Q92988 240 aaPredicted RBP10.03□□□□□ -0.8
SFSWAP-209ENST00000540469 RAB1BQ9H0U4 201 aa10.03□□□□□ -0.8
SFSWAP-209ENST00000540469 ZMAT4Q9H898 229 aa10.03□□□□□ -0.8
SFSWAP-209ENST00000540469 RALYQ9UKM9 306 aaKnown RBP10.03□□□□□ -0.8
SFSWAP-209ENST00000540469 MBD3L4A6NDZ8 208 aaPredicted RBP10.02□□□□□ -0.8
SFSWAP-209ENST00000540469 MBD3L3A6NE82 208 aaPredicted RBP10.02□□□□□ -0.8
SFSWAP-209ENST00000540469 MBD3L5A6NJ08 208 aaPredicted RBP10.02□□□□□ -0.8
SFSWAP-209ENST00000540469 VSTM5A8MXK1 200 aa10.02□□□□□ -0.8
SFSWAP-209ENST00000540469 MBD3L2Q8NHZ7 208 aaPredicted RBP10.02□□□□□ -0.8
SFSWAP-209ENST00000540469 TMEM190Q8WZ59 177 aa10.02□□□□□ -0.8
SFSWAP-209ENST00000540469 RAXQ9Y2V3 346 aa10.02□□□□□ -0.8
SFSWAP-209ENST00000540469 A6NJY4 79 aa10.02□□□□□ -0.81
SFSWAP-209ENST00000540469 PLNP26678 52 aa10.02□□□□□ -0.81
SFSWAP-209ENST00000540469 GFRALQ6UXV0 394 aa10.02□□□□□ -0.81
SFSWAP-209ENST00000540469 VKORC1Q9BQB6 163 aa10.02□□□□□ -0.81
SFSWAP-209ENST00000540469 LINC01549A6NIU2 74 aa10.02□□□□□ -0.81
SFSWAP-209ENST00000540469 IGLC6P0CF74 106 aa10.02□□□□□ -0.81
SFSWAP-209ENST00000540469 ARL3P36405 182 aa10.02□□□□□ -0.81
SFSWAP-209ENST00000540469 C1QTNF4Q9BXJ3 329 aa10.02□□□□□ -0.81
SFSWAP-209ENST00000540469 ADIPOQQ15848 244 aa10.01□□□□□ -0.81
SFSWAP-209ENST00000540469 SMG1Q96Q15 3661 aaKnown RBP10.01□□□□□ -0.81
SFSWAP-209ENST00000540469 A0A087WX48 190 aa10.01□□□□□ -0.81
SFSWAP-209ENST00000540469 C8orf31Q8N9H6 132 aa10.01□□□□□ -0.81
SFSWAP-209ENST00000540469 SPENQ96T58 3664 aaKnown RBP10.01□□□□□ -0.81
SFSWAP-209ENST00000540469 MYMXA0A1B0GTQ4 84 aa10□□□□□ -0.81
SFSWAP-209ENST00000540469 BUB1B-PAK6H3BSN5 160 aa10□□□□□ -0.81
SFSWAP-209ENST00000540469 SCGB1C2P0DMR2 95 aa10□□□□□ -0.81
SFSWAP-209ENST00000540469 HERV-K104P63124 156 aa10□□□□□ -0.81
SFSWAP-209ENST00000540469 TCF15Q12870 199 aa10□□□□□ -0.81
SFSWAP-209ENST00000540469 PTH2Q96A98 100 aa10□□□□□ -0.81
SFSWAP-209ENST00000540469 SCGB3A1Q96QR1 104 aa10□□□□□ -0.81
SFSWAP-209ENST00000540469 ONECUT1Q9UBC0 465 aa10□□□□□ -0.81
SFSWAP-209ENST00000540469 SCGB2A1O75556 95 aa10□□□□□ -0.81
SFSWAP-209ENST00000540469 TRGV3P03979 118 aa10□□□□□ -0.81
SFSWAP-209ENST00000540469 CRYGBP07316 175 aa10□□□□□ -0.81
SFSWAP-209ENST00000540469 IGFBPL1Q8WX77 278 aa10□□□□□ -0.81
SFSWAP-209ENST00000540469 ZNF815PA8K554 130 aa10□□□□□ -0.81
SFSWAP-209ENST00000540469 TIMM23O14925 209 aa10□□□□□ -0.81
SFSWAP-209ENST00000540469 IGHV3OR16-13A0A075B7E8 117 aa9.99□□□□□ -0.81
SFSWAP-209ENST00000540469 IGHV3-74A0A0B4J1X5 117 aa9.99□□□□□ -0.81
SFSWAP-209ENST00000540469 H7C1H1 209 aa9.99□□□□□ -0.81
SFSWAP-209ENST00000540469 ANAPC13Q9BS18 74 aa9.99□□□□□ -0.81
SFSWAP-209ENST00000540469 C21orf62Q9NYP8 219 aa9.99□□□□□ -0.81
SFSWAP-209ENST00000540469 MED13LQ71F56 2210 aa9.99□□□□□ -0.81
SFSWAP-209ENST00000540469 J3KRW8 73 aa9.99□□□□□ -0.81
SFSWAP-209ENST00000540469 MRPS12O15235 138 aaKnown RBP9.99□□□□□ -0.81
SFSWAP-209ENST00000540469 ZNF883P0CG24 379 aa9.99□□□□□ -0.81
SFSWAP-209ENST00000540469 CD59P13987 128 aa9.99□□□□□ -0.81
SFSWAP-209ENST00000540469 BSPH1Q075Z2 132 aa9.99□□□□□ -0.81
SFSWAP-209ENST00000540469 ANKRD11Q6UB99 2663 aaPredicted RBP9.99□□□□□ -0.81
SFSWAP-209ENST00000540469 ATRXP46100 2492 aa9.99□□□□□ -0.81
SFSWAP-209ENST00000540469 IGHV3-66A0A0C4DH42 116 aa9.99□□□□□ -0.81
SFSWAP-209ENST00000540469 F8VRH5 84 aa9.98□□□□□ -0.81
SFSWAP-209ENST00000540469 KLRD1Q13241 179 aa9.98□□□□□ -0.81
SFSWAP-209ENST00000540469 TMEM78Q5T7P6 136 aa9.98□□□□□ -0.81
SFSWAP-209ENST00000540469 LYRM7Q5U5X0 104 aa9.98□□□□□ -0.81
SFSWAP-209ENST00000540469 IL17RELQ6ZVW7 336 aa9.98□□□□□ -0.81
SFSWAP-209ENST00000540469 HLA-DRB4P13762 266 aa9.98□□□□□ -0.81
SFSWAP-209ENST00000540469 SMIM20Q8N5G0 67 aa9.98□□□□□ -0.81
SFSWAP-209ENST00000540469 RNF182Q8N6D2 247 aa9.98□□□□□ -0.81
SFSWAP-209ENST00000540469 PRO0461Q9UI25 63 aa9.98□□□□□ -0.81
SFSWAP-209ENST00000540469 FAM215AQ9Y5M1 114 aa9.98□□□□□ -0.81
SFSWAP-209ENST00000540469 HLA-DRB4X5D2U9 266 aa9.98□□□□□ -0.81
SFSWAP-209ENST00000540469 ABCA4P78363 2273 aa9.98□□□□□ -0.81
SFSWAP-209ENST00000540469 FAM90A27PA6NNH2 459 aa9.98□□□□□ -0.81
SFSWAP-209ENST00000540469 DYNAPQ8N1N2 210 aa9.98□□□□□ -0.81
SFSWAP-209ENST00000540469 LYNX1G3V0Z9 82 aa9.97□□□□□ -0.81
SFSWAP-209ENST00000540469 LYNX1P0DP58 116 aa9.97□□□□□ -0.81
SFSWAP-209ENST00000540469 DLX6P56179 175 aa9.97□□□□□ -0.81
SFSWAP-209ENST00000540469 CFHR4Q92496 578 aa9.97□□□□□ -0.81
SFSWAP-209ENST00000540469 ATMQ13315 3056 aa9.97□□□□□ -0.81
SFSWAP-209ENST00000540469 TRBV7-3A0A075B6L6 115 aa9.97□□□□□ -0.81
SFSWAP-209ENST00000540469 NBR2O15453 112 aa9.97□□□□□ -0.81
SFSWAP-209ENST00000540469 Q6ZUT4 128 aa9.97□□□□□ -0.81
SFSWAP-209ENST00000540469 NUP37Q8NFH4 326 aa9.96□□□□□ -0.81
SFSWAP-209ENST00000540469 PRADC1Q9BSG0 188 aa9.96□□□□□ -0.81
SFSWAP-209ENST00000540469 ZZEF1O43149 2961 aa9.96□□□□□ -0.81
SFSWAP-209ENST00000540469 KALRNO60229 2985 aa9.96□□□□□ -0.81
SFSWAP-209ENST00000540469 LINC01548A6NM66 108 aa9.96□□□□□ -0.81
SFSWAP-209ENST00000540469 XGP55808 180 aa9.96□□□□□ -0.81
SFSWAP-209ENST00000540469 ZFP2Q6ZN57 461 aa9.96□□□□□ -0.81
SFSWAP-209ENST00000540469 PRAC2D3DTV9 90 aa9.96□□□□□ -0.82
SFSWAP-209ENST00000540469 IGLV1-47P01700 117 aa9.96□□□□□ -0.82
SFSWAP-209ENST00000540469 C3orf36Q3SXR2 165 aa9.96□□□□□ -0.82
SFSWAP-209ENST00000540469 MORN3Q6PF18 240 aaPredicted RBP9.96□□□□□ -0.82
SFSWAP-209ENST00000540469 SPTBN1Q01082 2364 aaKnown RBP9.96□□□□□ -0.82
SFSWAP-209ENST00000540469 IGHV3-49A0A0A0MS15 119 aa9.95□□□□□ -0.82
SFSWAP-209ENST00000540469 CFAP126Q5VTH2 177 aa9.95□□□□□ -0.82
SFSWAP-209ENST00000540469 C3orf56Q8N813 242 aa9.95□□□□□ -0.82
SFSWAP-209ENST00000540469 PPDPFLQ8WWR9 84 aa9.95□□□□□ -0.82
SFSWAP-209ENST00000540469 TRBV20-1A0A075B6N2 111 aa9.95□□□□□ -0.82
SFSWAP-209ENST00000540469 PRSS29PA6NIE9 313 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms