RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 CLPSL1A2RUU4 121 aa12.79□□□□□ -0.36
CTSB-228ENST00000533455 GCSHP23434 173 aa12.79□□□□□ -0.36
CTSB-228ENST00000533455 PPIFP30405 207 aaKnown RBP12.79□□□□□ -0.36
CTSB-228ENST00000533455 C15orf32Q32M92 178 aa12.79□□□□□ -0.36
CTSB-228ENST00000533455 SAMD5Q5TGI4 173 aa12.79□□□□□ -0.36
CTSB-228ENST00000533455 IGHV3-35A0A0C4DH35 117 aa12.79□□□□□ -0.36
CTSB-228ENST00000533455 GOSR1O95249 250 aa12.79□□□□□ -0.36
CTSB-228ENST00000533455 SRSF1Q07955 248 aaKnown RBP eCLIP12.79□□□□□ -0.36
CTSB-228ENST00000533455 NRACQ8N912 160 aa12.79□□□□□ -0.36
CTSB-228ENST00000533455 AGPAT4-IT1Q9H0P7 198 aa12.79□□□□□ -0.36
CTSB-228ENST00000533455 HIF1ANQ9NWT6 349 aa12.79□□□□□ -0.36
CTSB-228ENST00000533455 TRBV25-1A0A075B6N4 114 aa12.78□□□□□ -0.36
CTSB-228ENST00000533455 IGHV4-4A0A075B6R2 117 aa12.78□□□□□ -0.36
CTSB-228ENST00000533455 IGHV7-4-1A0A0J9YVY3 117 aa12.78□□□□□ -0.36
CTSB-228ENST00000533455 TRGV3P03979 118 aa12.78□□□□□ -0.36
CTSB-228ENST00000533455 SMIM17P0DL12 118 aa12.78□□□□□ -0.36
CTSB-228ENST00000533455 TM4SF20Q53R12 229 aa12.78□□□□□ -0.36
CTSB-228ENST00000533455 PHLDA1Q8WV24 401 aaPredicted RBP12.78□□□□□ -0.36
CTSB-228ENST00000533455 TM2D2Q9BX73 214 aa12.78□□□□□ -0.36
CTSB-228ENST00000533455 TRAV8-2A0A0B4J237 113 aa12.78□□□□□ -0.36
CTSB-228ENST00000533455 CLEC3BP05452 202 aa12.78□□□□□ -0.36
CTSB-228ENST00000533455 FOXC1Q12948 553 aa12.78□□□□□ -0.36
CTSB-228ENST00000533455 ZC2HC1BQ5TFG8 222 aa12.78□□□□□ -0.36
CTSB-228ENST00000533455 TTTY13Q9BZ97 58 aa12.78□□□□□ -0.36
CTSB-228ENST00000533455 SIRPDQ9H106 197 aa12.78□□□□□ -0.36
CTSB-228ENST00000533455 TMEM8BA6NDV4 472 aa12.77□□□□□ -0.37
CTSB-228ENST00000533455 LAGE3Q14657 143 aa12.77□□□□□ -0.37
CTSB-228ENST00000533455 GTSCR1Q86UQ5 136 aa12.77□□□□□ -0.37
CTSB-228ENST00000533455 K7ENP7 123 aa12.76□□□□□ -0.37
CTSB-228ENST00000533455 TMEM78Q5T7P6 136 aa12.76□□□□□ -0.37
CTSB-228ENST00000533455 C9orf47Q6ZRZ4 202 aa12.76□□□□□ -0.37
CTSB-228ENST00000533455 CCDC140Q96MF4 163 aa12.76□□□□□ -0.37
CTSB-228ENST00000533455 TAL2Q16559 108 aa12.76□□□□□ -0.37
CTSB-228ENST00000533455 ECSCRQ19T08 205 aa12.76□□□□□ -0.37
CTSB-228ENST00000533455 CEND1Q8N111 149 aa12.76□□□□□ -0.37
CTSB-228ENST00000533455 MYOZ3Q8TDC0 251 aa12.76□□□□□ -0.37
CTSB-228ENST00000533455 ANKHD1Q8IWZ3 2542 aaKnown RBP12.76□□□□□ -0.37
CTSB-228ENST00000533455 A0A087WX48 190 aa12.75□□□□□ -0.37
CTSB-228ENST00000533455 ATP6V0E1O15342 81 aa12.75□□□□□ -0.37
CTSB-228ENST00000533455 MRPL35Q9NZE8 188 aaKnown RBP12.75□□□□□ -0.37
CTSB-228ENST00000533455 ZFP36P26651 326 aaKnown RBP12.74□□□□□ -0.37
CTSB-228ENST00000533455 RIPPLY3P57055 190 aa12.74□□□□□ -0.37
CTSB-228ENST00000533455 SELENOKQ9Y6D0 94 aa12.74□□□□□ -0.37
CTSB-228ENST00000533455 U3KQE9 123 aa12.74□□□□□ -0.37
CTSB-228ENST00000533455 PIEZO2Q9H5I5 2752 aa12.74□□□□□ -0.37
CTSB-228ENST00000533455 TRAV40A0A0B4J280 105 aa12.74□□□□□ -0.37
CTSB-228ENST00000533455 C8orf86Q6ZUL3 223 aa12.74□□□□□ -0.37
CTSB-228ENST00000533455 AJUBAQ96IF1 538 aa12.74□□□□□ -0.37
CTSB-228ENST00000533455 TMEM160Q9NX00 188 aa12.74□□□□□ -0.37
CTSB-228ENST00000533455 IGHV3-66A0A0C4DH42 116 aa12.73□□□□□ -0.37
CTSB-228ENST00000533455 CLEC19AQ6UXS0 136 aa12.73□□□□□ -0.37
CTSB-228ENST00000533455 EEF1AKMT3Q96AZ1 226 aa12.73□□□□□ -0.37
CTSB-228ENST00000533455 MRAP2Q96G30 205 aa12.73□□□□□ -0.37
CTSB-228ENST00000533455 METTL26Q96S19 204 aa12.73□□□□□ -0.37
CTSB-228ENST00000533455 K7ERJ3 54 aa12.72□□□□□ -0.37
CTSB-228ENST00000533455 CCL21O00585 134 aa12.72□□□□□ -0.37
CTSB-228ENST00000533455 UFC1Q9Y3C8 167 aa12.72□□□□□ -0.37
CTSB-228ENST00000533455 TRBV7-1A0A0A6YYK4 115 aa12.72□□□□□ -0.37
CTSB-228ENST00000533455 TRAV12-1A0A0B4J245 112 aa12.72□□□□□ -0.37
CTSB-228ENST00000533455 PLNP26678 52 aa12.72□□□□□ -0.37
CTSB-228ENST00000533455 CDSNQ15517 529 aa12.72□□□□□ -0.37
CTSB-228ENST00000533455 ABCA4P78363 2273 aa12.72□□□□□ -0.37
CTSB-228ENST00000533455 TRAV26-2A0A0B4J265 109 aa12.71□□□□□ -0.37
CTSB-228ENST00000533455 E9PLD3 99 aa12.71□□□□□ -0.37
CTSB-228ENST00000533455 UBE2E1P51965 193 aa12.71□□□□□ -0.37
CTSB-228ENST00000533455 MAPKAPK5-AS1Q8N8E1 139 aa12.71□□□□□ -0.37
CTSB-228ENST00000533455 NHP2Q9NX24 153 aaKnown RBP12.71□□□□□ -0.37
CTSB-228ENST00000533455 LINC01619G3V211 115 aa12.71□□□□□ -0.38
CTSB-228ENST00000533455 ADORA2A-AS1P86434 159 aa12.71□□□□□ -0.38
CTSB-228ENST00000533455 SPANXN1Q5VSR9 72 aa12.71□□□□□ -0.38
CTSB-228ENST00000533455 SMIM2Q9BVW6 85 aa12.71□□□□□ -0.38
CTSB-228ENST00000533455 LENEPQ9Y5L5 61 aa12.71□□□□□ -0.38
CTSB-228ENST00000533455 IGHV3OR16-13A0A075B7E8 117 aa12.7□□□□□ -0.38
CTSB-228ENST00000533455 IGHV3-74A0A0B4J1X5 117 aa12.7□□□□□ -0.38
CTSB-228ENST00000533455 ATP6V0BQ99437 205 aa12.7□□□□□ -0.38
CTSB-228ENST00000533455 TACC2O95359 2948 aa12.7□□□□□ -0.38
CTSB-228ENST00000533455 SPTBN4Q9H254 2564 aa12.7□□□□□ -0.38
CTSB-228ENST00000533455 G3V318 75 aa12.69□□□□□ -0.38
CTSB-228ENST00000533455 IGLL5B9A064 214 aa12.69□□□□□ -0.38
CTSB-228ENST00000533455 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.69□□□□□ -0.38
CTSB-228ENST00000533455 SLC25A16P16260 332 aa12.69□□□□□ -0.38
CTSB-228ENST00000533455 F8VRH5 84 aa12.68□□□□□ -0.38
CTSB-228ENST00000533455 H3BVH4 76 aa12.68□□□□□ -0.38
CTSB-228ENST00000533455 H7C1H1 209 aa12.68□□□□□ -0.38
CTSB-228ENST00000533455 EFNA4P52798 201 aa12.68□□□□□ -0.38
CTSB-228ENST00000533455 PRR9Q5T870 116 aa12.68□□□□□ -0.38
CTSB-228ENST00000533455 C9orf139Q6ZV77 190 aa12.68□□□□□ -0.38
CTSB-228ENST00000533455 ITLN2Q8WWU7 325 aaPredicted RBP12.68□□□□□ -0.38
CTSB-228ENST00000533455 IGHV3-49A0A0A0MS15 119 aa12.67□□□□□ -0.38
CTSB-228ENST00000533455 ZNF207O43670 478 aaKnown RBP12.67□□□□□ -0.38
CTSB-228ENST00000533455 Q6ZQT7 251 aa12.67□□□□□ -0.38
CTSB-228ENST00000533455 GLMPQ8WWB7 406 aa12.67□□□□□ -0.38
CTSB-228ENST00000533455 DCHS2Q6V1P9 2916 aa12.67□□□□□ -0.38
CTSB-228ENST00000533455 TRBV7-3A0A075B6L6 115 aa12.67□□□□□ -0.38
CTSB-228ENST00000533455 CENPVL3A0A0U1RRI6 287 aa12.67□□□□□ -0.38
CTSB-228ENST00000533455 LINC01548A6NM66 108 aa12.67□□□□□ -0.38
CTSB-228ENST00000533455 TMEM238C9JI98 176 aa12.67□□□□□ -0.38
CTSB-228ENST00000533455 C12orf74Q32Q52 190 aa12.67□□□□□ -0.38
CTSB-228ENST00000533455 ORMDL2Q53FV1 153 aa12.67□□□□□ -0.38
CTSB-228ENST00000533455 TEX48A0A1B0GUV7 120 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 184.6 ms