RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 RPP21Q9H633 154 aaKnown RBP6.24□□□□□ -1.41
NEDD8-207ENST00000533242 SORL1Q92673 2214 aa6.23□□□□□ -1.41
NEDD8-207ENST00000533242 IGLV11-55A0A075B6I3 123 aa6.23□□□□□ -1.41
NEDD8-207ENST00000533242 TRBV19A0A075B6N1 114 aa6.23□□□□□ -1.41
NEDD8-207ENST00000533242 OVOL1O14753 267 aa6.23□□□□□ -1.41
NEDD8-207ENST00000533242 EGR2P11161 476 aaPredicted RBP6.23□□□□□ -1.41
NEDD8-207ENST00000533242 LCN12Q6JVE5 192 aa6.23□□□□□ -1.41
NEDD8-207ENST00000533242 PRNTQ86SH4 94 aa6.23□□□□□ -1.41
NEDD8-207ENST00000533242 RNF125Q96EQ8 232 aa6.23□□□□□ -1.41
NEDD8-207ENST00000533242 FMC1Q96HJ9 113 aa6.23□□□□□ -1.41
NEDD8-207ENST00000533242 ZNF414Q96IQ9 312 aa6.23□□□□□ -1.41
NEDD8-207ENST00000533242 UBE2E2Q96LR5 201 aa6.23□□□□□ -1.41
NEDD8-207ENST00000533242 ALKBH7Q9BT30 221 aaPredicted RBP6.23□□□□□ -1.41
NEDD8-207ENST00000533242 KRTAP3-3Q9BYR6 98 aa6.23□□□□□ -1.41
NEDD8-207ENST00000533242 KRTAP3-2Q9BYR7 98 aa6.23□□□□□ -1.41
NEDD8-207ENST00000533242 TMEM14CQ9P0S9 112 aa6.23□□□□□ -1.41
NEDD8-207ENST00000533242 HUWE1Q7Z6Z7 4374 aaKnown RBP6.23□□□□□ -1.41
NEDD8-207ENST00000533242 IGHV3-35A0A0C4DH35 117 aa6.22□□□□□ -1.41
NEDD8-207ENST00000533242 IGF1P05019 195 aa6.22□□□□□ -1.41
NEDD8-207ENST00000533242 C3orf79P0CE67 100 aa6.22□□□□□ -1.41
NEDD8-207ENST00000533242 NTF3P20783 257 aa6.22□□□□□ -1.41
NEDD8-207ENST00000533242 FOXA3P55318 350 aaPredicted RBP6.22□□□□□ -1.41
NEDD8-207ENST00000533242 MAJINQ3KP22 176 aa6.22□□□□□ -1.41
NEDD8-207ENST00000533242 ZC2HC1AQ96GY0 325 aa6.22□□□□□ -1.41
NEDD8-207ENST00000533242 C2orf88Q9BSF0 95 aa6.22□□□□□ -1.41
NEDD8-207ENST00000533242 OTORQ9NRC9 128 aa6.22□□□□□ -1.41
NEDD8-207ENST00000533242 NPIPB6E9PJ23 425 aa6.22□□□□□ -1.41
NEDD8-207ENST00000533242 NDUFB8O95169 186 aa6.22□□□□□ -1.41
NEDD8-207ENST00000533242 P01737 135 aa6.22□□□□□ -1.41
NEDD8-207ENST00000533242 APOHP02749 345 aaPredicted RBP6.22□□□□□ -1.41
NEDD8-207ENST00000533242 FCGR2BP31994 310 aaPredicted RBP6.22□□□□□ -1.41
NEDD8-207ENST00000533242 CRIP1P50238 77 aa6.22□□□□□ -1.41
NEDD8-207ENST00000533242 PMCHL1Q16048 86 aa6.22□□□□□ -1.41
NEDD8-207ENST00000533242 C4orf48Q5BLP8 95 aa6.22□□□□□ -1.41
NEDD8-207ENST00000533242 SPATA12Q7Z6I5 190 aa6.22□□□□□ -1.41
NEDD8-207ENST00000533242 ATOH7Q8N100 152 aa6.22□□□□□ -1.41
NEDD8-207ENST00000533242 A8MZ25 164 aa6.21□□□□□ -1.41
NEDD8-207ENST00000533242 DIRC3C9JPN6 131 aa6.21□□□□□ -1.41
NEDD8-207ENST00000533242 SAP30O75446 220 aa6.21□□□□□ -1.41
NEDD8-207ENST00000533242 OR2J3O76001 311 aa6.21□□□□□ -1.41
NEDD8-207ENST00000533242 HLA-DRB1P01911 266 aa6.21□□□□□ -1.41
NEDD8-207ENST00000533242 COX19Q49B96 90 aa6.21□□□□□ -1.41
NEDD8-207ENST00000533242 RASL11AQ6T310 242 aa6.21□□□□□ -1.41
NEDD8-207ENST00000533242 ZNF562Q6V9R5 426 aa6.21□□□□□ -1.41
NEDD8-207ENST00000533242 ARPC1AQ92747 370 aa6.21□□□□□ -1.41
NEDD8-207ENST00000533242 SRSF8Q9BRL6 282 aaKnown RBP6.21□□□□□ -1.41
NEDD8-207ENST00000533242 CHRDL1Q9BU40 450 aa6.21□□□□□ -1.41
NEDD8-207ENST00000533242 C19orf73Q9NVV2 129 aa6.21□□□□□ -1.41
NEDD8-207ENST00000533242 ZNF492Q9P255 531 aa6.21□□□□□ -1.41
NEDD8-207ENST00000533242 LYSTQ99698 3801 aa6.21□□□□□ -1.42
NEDD8-207ENST00000533242 IGHV7-81A0A0B4J1V7 117 aa6.21□□□□□ -1.42
NEDD8-207ENST00000533242 OR2T8A6NH00 312 aa6.21□□□□□ -1.42
NEDD8-207ENST00000533242 GNG7O60262 68 aa6.21□□□□□ -1.42
NEDD8-207ENST00000533242 CTRLP40313 264 aa6.21□□□□□ -1.42
NEDD8-207ENST00000533242 HBBP68871 147 aa6.21□□□□□ -1.42
NEDD8-207ENST00000533242 IGFL4Q6B9Z1 124 aa6.21□□□□□ -1.42
NEDD8-207ENST00000533242 EBLN2Q6P2I7 272 aa6.21□□□□□ -1.42
NEDD8-207ENST00000533242 C16orf54Q6UWD8 224 aa6.21□□□□□ -1.42
NEDD8-207ENST00000533242 SMIM12Q96EX1 92 aa6.21□□□□□ -1.42
NEDD8-207ENST00000533242 C8orf49Q96NF6 230 aa6.21□□□□□ -1.42
NEDD8-207ENST00000533242 IGLV1-40P01703 118 aa6.2□□□□□ -1.42
NEDD8-207ENST00000533242 PPIFP30405 207 aaKnown RBP6.2□□□□□ -1.42
NEDD8-207ENST00000533242 LINC00173Q6ZV60 143 aa6.2□□□□□ -1.42
NEDD8-207ENST00000533242 BPIFA4PQ86YQ2 179 aa6.2□□□□□ -1.42
NEDD8-207ENST00000533242 C20orf144Q9BQM9 153 aa6.2□□□□□ -1.42
NEDD8-207ENST00000533242 SPATA25Q9BR10 227 aa6.2□□□□□ -1.42
NEDD8-207ENST00000533242 KLK15Q9H2R5 256 aa6.2□□□□□ -1.42
NEDD8-207ENST00000533242 NPIPB5A8MRT5 1133 aa6.2□□□□□ -1.42
NEDD8-207ENST00000533242 A8MWL6 223 aa6.2□□□□□ -1.42
NEDD8-207ENST00000533242 CTSGP08311 255 aa6.2□□□□□ -1.42
NEDD8-207ENST00000533242 RAB4AP20338 218 aa6.2□□□□□ -1.42
NEDD8-207ENST00000533242 HLA-DMBP28068 263 aa6.2□□□□□ -1.42
NEDD8-207ENST00000533242 ZNF138P52744 262 aa6.2□□□□□ -1.42
NEDD8-207ENST00000533242 KLF5Q13887 457 aaPredicted RBP6.2□□□□□ -1.42
NEDD8-207ENST00000533242 CT83Q5H943 113 aa6.2□□□□□ -1.42
NEDD8-207ENST00000533242 RNASEKQ6P5S7 137 aaKnown RBP6.2□□□□□ -1.42
NEDD8-207ENST00000533242 ZNF705AQ6ZN79 300 aaPredicted RBP6.2□□□□□ -1.42
NEDD8-207ENST00000533242 ATP5L2Q7Z4Y8 100 aa6.2□□□□□ -1.42
NEDD8-207ENST00000533242 TTC9CQ8N5M4 171 aa6.2□□□□□ -1.42
NEDD8-207ENST00000533242 DLX4Q92988 240 aaPredicted RBP6.2□□□□□ -1.42
NEDD8-207ENST00000533242 VAMP8Q9BV40 100 aa6.2□□□□□ -1.42
NEDD8-207ENST00000533242 CLEC5AQ9NY25 188 aa6.2□□□□□ -1.42
NEDD8-207ENST00000533242 LINC01619G3V211 115 aa6.19□□□□□ -1.42
NEDD8-207ENST00000533242 ARMS2P0C7Q2 107 aa6.19□□□□□ -1.42
NEDD8-207ENST00000533242 IGHV4-30-4P0DP06 118 aa6.19□□□□□ -1.42
NEDD8-207ENST00000533242 SLURP1P55000 103 aa6.19□□□□□ -1.42
NEDD8-207ENST00000533242 Q56UQ5 140 aa6.19□□□□□ -1.42
NEDD8-207ENST00000533242 RBPMS2Q6ZRY4 209 aaKnown RBP6.19□□□□□ -1.42
NEDD8-207ENST00000533242 Q8N1Y9 231 aa6.19□□□□□ -1.42
NEDD8-207ENST00000533242 IL17DQ8TAD2 202 aa6.19□□□□□ -1.42
NEDD8-207ENST00000533242 C21orf62Q9NYP8 219 aa6.19□□□□□ -1.42
NEDD8-207ENST00000533242 TP73-AS1Q9UF72 201 aa6.19□□□□□ -1.42
NEDD8-207ENST00000533242 PSG8Q9UQ74 426 aa6.19□□□□□ -1.42
NEDD8-207ENST00000533242 IGKV2-40A0A087WW87 121 aaPredicted RBP6.19□□□□□ -1.42
NEDD8-207ENST00000533242 C2orf70A6NJV1 201 aa6.19□□□□□ -1.42
NEDD8-207ENST00000533242 IGKV2D-40P01614 121 aaPredicted RBP6.19□□□□□ -1.42
NEDD8-207ENST00000533242 RAB9AP51151 201 aa6.19□□□□□ -1.42
NEDD8-207ENST00000533242 MFAP4P55083 255 aa6.19□□□□□ -1.42
NEDD8-207ENST00000533242 SSTP61278 116 aa6.19□□□□□ -1.42
NEDD8-207ENST00000533242 PSG3Q16557 428 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms