RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 OR2T10Q8NGZ9 312 aa1.05□□□□□ -2.24
CD44-234ENST00000531873 TEX37Q96LM6 180 aa1.05□□□□□ -2.24
CD44-234ENST00000531873 YPEL2Q96QA6 119 aa1.05□□□□□ -2.24
CD44-234ENST00000531873 REG4Q9BYZ8 158 aa1.05□□□□□ -2.24
CD44-234ENST00000531873 PCBD2Q9H0N5 130 aa1.05□□□□□ -2.24
CD44-234ENST00000531873 CYSTM1Q9H1C7 97 aa1.05□□□□□ -2.24
CD44-234ENST00000531873 TRABDQ9H4I3 376 aa1.05□□□□□ -2.24
CD44-234ENST00000531873 BIN3Q9NQY0 253 aa1.05□□□□□ -2.24
CD44-234ENST00000531873 SMPXQ9UHP9 88 aa1.05□□□□□ -2.24
CD44-234ENST00000531873 SLC35A3Q9Y2D2 325 aa1.05□□□□□ -2.24
CD44-234ENST00000531873 MON2Q7Z3U7 1717 aa1.05□□□□□ -2.24
CD44-234ENST00000531873 TIAM2Q8IVF5 1701 aa1.05□□□□□ -2.24
CD44-234ENST00000531873 XRN1Q8IZH2 1706 aaKnown RBP1.05□□□□□ -2.24
CD44-234ENST00000531873 NSD1Q96L73 2696 aaPredicted RBP1.05□□□□□ -2.24
CD44-234ENST00000531873 HIVEP1P15822 2718 aa1.05□□□□□ -2.24
CD44-234ENST00000531873 ANKRD30AQ9BXX3 1397 aa1.05□□□□□ -2.24
CD44-234ENST00000531873 MEGF8Q7Z7M0 2845 aa1.05□□□□□ -2.24
CD44-234ENST00000531873 DLG5Q8TDM6 1919 aa1.05□□□□□ -2.24
CD44-234ENST00000531873 BOD1L1Q8NFC6 3051 aa1.04□□□□□ -2.24
CD44-234ENST00000531873 QSER1Q2KHR3 1735 aa1.04□□□□□ -2.24
CD44-234ENST00000531873 SCN11AQ9UI33 1791 aa1.04□□□□□ -2.24
CD44-234ENST00000531873 WNK1Q9H4A3 2382 aa1.04□□□□□ -2.24
CD44-234ENST00000531873 CELSR1Q9NYQ6 3014 aa1.04□□□□□ -2.24
CD44-234ENST00000531873 MGAM2Q2M2H8 2515 aa1.04□□□□□ -2.24
CD44-234ENST00000531873 TRAV12-1A0A0B4J245 112 aa1.04□□□□□ -2.24
CD44-234ENST00000531873 SPAARA0A1B0GVQ0 90 aa1.04□□□□□ -2.24
CD44-234ENST00000531873 FUOMA2VDF0 154 aa1.04□□□□□ -2.24
CD44-234ENST00000531873 B4DSR2 109 aa1.04□□□□□ -2.24
CD44-234ENST00000531873 PGRMC1O00264 195 aaKnown RBP1.04□□□□□ -2.24
CD44-234ENST00000531873 NDUFB3O43676 98 aa1.04□□□□□ -2.24
CD44-234ENST00000531873 OR1I1O60431 355 aa1.04□□□□□ -2.24
CD44-234ENST00000531873 GADD45GO95257 159 aa1.04□□□□□ -2.24
CD44-234ENST00000531873 SERPINB1P30740 379 aa1.04□□□□□ -2.24
CD44-234ENST00000531873 DYNLT3P51808 116 aa1.04□□□□□ -2.24
CD44-234ENST00000531873 CNBPP62633 177 aaKnown RBP1.04□□□□□ -2.24
CD44-234ENST00000531873 UBE2BP63146 152 aa1.04□□□□□ -2.24
CD44-234ENST00000531873 CDK5R1Q15078 307 aa1.04□□□□□ -2.24
CD44-234ENST00000531873 BCL2L15Q5TBC7 163 aa1.04□□□□□ -2.24
CD44-234ENST00000531873 UNQ6190/PRO20217Q6UXQ8 127 aa1.04□□□□□ -2.24
CD44-234ENST00000531873 NUP35Q8NFH5 326 aa1.04□□□□□ -2.24
CD44-234ENST00000531873 PLEKHB2Q96CS7 222 aa1.04□□□□□ -2.24
CD44-234ENST00000531873 MALSU1Q96EH3 234 aa1.04□□□□□ -2.24
CD44-234ENST00000531873 PBDC1Q9BVG4 233 aa1.04□□□□□ -2.24
CD44-234ENST00000531873 KRTAP4-1Q9BYQ7 146 aa1.04□□□□□ -2.24
CD44-234ENST00000531873 ASB4Q9Y574 426 aa1.04□□□□□ -2.24
CD44-234ENST00000531873 ROCK1Q13464 1354 aa1.04□□□□□ -2.24
CD44-234ENST00000531873 CSPG4Q6UVK1 2322 aa1.04□□□□□ -2.24
CD44-234ENST00000531873 NHSQ6T4R5 1651 aa1.04□□□□□ -2.24
CD44-234ENST00000531873 C4AP0C0L4 1744 aa1.03□□□□□ -2.24
CD44-234ENST00000531873 TJP1Q07157 1748 aa1.03□□□□□ -2.24
CD44-234ENST00000531873 MYO5CQ9NQX4 1742 aa1.03□□□□□ -2.24
CD44-234ENST00000531873 ARFGEF1Q9Y6D6 1849 aa1.03□□□□□ -2.24
CD44-234ENST00000531873 NUP210Q8TEM1 1887 aaPredicted RBP1.03□□□□□ -2.24
CD44-234ENST00000531873 SNRNP200O75643 2136 aaKnown RBP1.03□□□□□ -2.24
CD44-234ENST00000531873 GPR31O00270 319 aa1.03□□□□□ -2.24
CD44-234ENST00000531873 TIMM17BO60830 172 aa1.03□□□□□ -2.24
CD44-234ENST00000531873 GGCTO75223 188 aaKnown RBP1.03□□□□□ -2.24
CD44-234ENST00000531873 TRGC2P03986 189 aa1.03□□□□□ -2.24
CD44-234ENST00000531873 HLA-EP13747 358 aa1.03□□□□□ -2.24
CD44-234ENST00000531873 ROMO1P60602 79 aa1.03□□□□□ -2.24
CD44-234ENST00000531873 RHOGP84095 191 aa1.03□□□□□ -2.24
CD44-234ENST00000531873 PATE2Q6UY27 113 aa1.03□□□□□ -2.24
CD44-234ENST00000531873 RPS19BP1Q86WX3 136 aaKnown RBP1.03□□□□□ -2.24
CD44-234ENST00000531873 OR10K1Q8NGX5 313 aa1.03□□□□□ -2.24
CD44-234ENST00000531873 SFT2D1Q8WV19 159 aa1.03□□□□□ -2.24
CD44-234ENST00000531873 ZHX1-C8orf76Q96EF9 292 aa1.03□□□□□ -2.24
CD44-234ENST00000531873 NPCDR1Q9BY65 106 aa1.03□□□□□ -2.24
CD44-234ENST00000531873 OR2J1Q9GZK6 312 aa1.03□□□□□ -2.24
CD44-234ENST00000531873 OR5AC2Q9NZP5 309 aa1.03□□□□□ -2.24
CD44-234ENST00000531873 V9GYQ6 96 aa1.03□□□□□ -2.24
CD44-234ENST00000531873 RFX7Q2KHR2 1363 aa1.03□□□□□ -2.24
CD44-234ENST00000531873 CPSF1Q10570 1443 aaKnown RBP1.03□□□□□ -2.24
CD44-234ENST00000531873 ANKARQ7Z5J8 1434 aa1.03□□□□□ -2.24
CD44-234ENST00000531873 ADGRG4Q8IZF6 3080 aa1.03□□□□□ -2.24
CD44-234ENST00000531873 RYR1P21817 5038 aa1.03□□□□□ -2.24
CD44-234ENST00000531873 KIF1AQ12756 1690 aa1.03□□□□□ -2.24
CD44-234ENST00000531873 WDFY3Q8IZQ1 3526 aa1.03□□□□□ -2.24
CD44-234ENST00000531873 CSMD1Q96PZ7 3565 aa1.03□□□□□ -2.25
CD44-234ENST00000531873 PTPRFP10586 1907 aa1.03□□□□□ -2.25
CD44-234ENST00000531873 TENM2Q9NT68 2774 aa1.02□□□□□ -2.25
CD44-234ENST00000531873 CHD7Q9P2D1 2997 aa1.02□□□□□ -2.25
CD44-234ENST00000531873 BIRC6Q9NR09 4857 aa1.02□□□□□ -2.25
CD44-234ENST00000531873 A8MWV9 139 aa1.02□□□□□ -2.25
CD44-234ENST00000531873 E9PCH4 1651 aa1.02□□□□□ -2.25
CD44-234ENST00000531873 MCM3APO60318 1980 aa1.02□□□□□ -2.25
CD44-234ENST00000531873 CXCL1P09341 107 aa1.02□□□□□ -2.25
CD44-234ENST00000531873 OGNP20774 298 aaKnown RBP1.02□□□□□ -2.25
CD44-234ENST00000531873 APCP25054 2843 aa1.02□□□□□ -2.25
CD44-234ENST00000531873 BRS3P32247 399 aa1.02□□□□□ -2.25
CD44-234ENST00000531873 MAP1AP78559 2803 aaPredicted RBP1.02□□□□□ -2.25
CD44-234ENST00000531873 FLG2Q5D862 2391 aaPredicted RBP1.02□□□□□ -2.25
CD44-234ENST00000531873 TMEM78Q5T7P6 136 aa1.02□□□□□ -2.25
CD44-234ENST00000531873 DCUN1D2Q6PH85 259 aa1.02□□□□□ -2.25
CD44-234ENST00000531873 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.02□□□□□ -2.25
CD44-234ENST00000531873 ZC2HC1AQ96GY0 325 aa1.02□□□□□ -2.25
CD44-234ENST00000531873 TRPM7Q96QT4 1865 aa1.02□□□□□ -2.25
CD44-234ENST00000531873 SELENOSQ9BQE4 189 aa1.02□□□□□ -2.25
CD44-234ENST00000531873 SLC25A21Q9BQT8 299 aaPredicted RBP1.02□□□□□ -2.25
CD44-234ENST00000531873 TMEM70Q9BUB7 260 aa1.02□□□□□ -2.25
CD44-234ENST00000531873 CENPHQ9H3R5 247 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 183.4 ms