RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 FAM74A1Q5RGS3 127 aa8.14□□□□□ -1.11
SH3RF1-205ENST00000511421 Q6ZTI0 123 aa8.14□□□□□ -1.11
SH3RF1-205ENST00000511421 SSX7Q7RTT5 188 aa8.14□□□□□ -1.11
SH3RF1-205ENST00000511421 CMTM2Q8TAZ6 248 aa8.14□□□□□ -1.11
SH3RF1-205ENST00000511421 ARPC5LQ9BPX5 153 aa8.14□□□□□ -1.11
SH3RF1-205ENST00000511421 TP53TG3Q9ULZ0 132 aa8.14□□□□□ -1.11
SH3RF1-205ENST00000511421 SMLR1H3BR10 107 aa8.13□□□□□ -1.11
SH3RF1-205ENST00000511421 RGS13O14921 159 aa8.13□□□□□ -1.11
SH3RF1-205ENST00000511421 TCL1AP56279 114 aa8.13□□□□□ -1.11
SH3RF1-205ENST00000511421 RNF212Q495C1 297 aa8.13□□□□□ -1.11
SH3RF1-205ENST00000511421 Q6AWC8 147 aa8.13□□□□□ -1.11
SH3RF1-205ENST00000511421 GOLT1AQ6ZVE7 132 aa8.13□□□□□ -1.11
SH3RF1-205ENST00000511421 ST6GAL2Q96JF0 529 aa8.13□□□□□ -1.11
SH3RF1-205ENST00000511421 ACTR3CQ9C0K3 210 aaPredicted RBP8.13□□□□□ -1.11
SH3RF1-205ENST00000511421 CYTL1Q9NRR1 136 aa8.13□□□□□ -1.11
SH3RF1-205ENST00000511421 RPH3ALQ9UNE2 315 aa8.13□□□□□ -1.11
SH3RF1-205ENST00000511421 KLF12Q9Y4X4 402 aa8.13□□□□□ -1.11
SH3RF1-205ENST00000511421 DNAH2Q9P225 4427 aa8.13□□□□□ -1.11
SH3RF1-205ENST00000511421 ARPC5O15511 151 aa8.12□□□□□ -1.11
SH3RF1-205ENST00000511421 HOXA5P20719 270 aa8.12□□□□□ -1.11
SH3RF1-205ENST00000511421 GNG5P63218 68 aa8.12□□□□□ -1.11
SH3RF1-205ENST00000511421 ZNF726P1Q15940 193 aa8.12□□□□□ -1.11
SH3RF1-205ENST00000511421 IBA57Q5T440 356 aaKnown RBP8.12□□□□□ -1.11
SH3RF1-205ENST00000511421 UBE2DNLQ8IWF7 75 aa8.12□□□□□ -1.11
SH3RF1-205ENST00000511421 SVIPQ8NHG7 77 aa8.12□□□□□ -1.11
SH3RF1-205ENST00000511421 TVP23CQ96ET8 276 aa8.12□□□□□ -1.11
SH3RF1-205ENST00000511421 C18orf15Q96N68 181 aa8.12□□□□□ -1.11
SH3RF1-205ENST00000511421 DNAH17Q9UFH2 4485 aa8.12□□□□□ -1.11
SH3RF1-205ENST00000511421 TRAV8-1A0A0A6YYK1 113 aa8.11□□□□□ -1.11
SH3RF1-205ENST00000511421 TAAR5O14804 337 aa8.11□□□□□ -1.11
SH3RF1-205ENST00000511421 SPINK4O60575 86 aa8.11□□□□□ -1.11
SH3RF1-205ENST00000511421 CXorf1O96002 111 aa8.11□□□□□ -1.11
SH3RF1-205ENST00000511421 OR5I1Q13606 314 aa8.11□□□□□ -1.11
SH3RF1-205ENST00000511421 TMPRSS5Q9H3S3 457 aa8.11□□□□□ -1.11
SH3RF1-205ENST00000511421 TMEM167BQ9NRX6 74 aa8.11□□□□□ -1.11
SH3RF1-205ENST00000511421 TRGV1A0A0A0MS02 117 aa8.11□□□□□ -1.11
SH3RF1-205ENST00000511421 NUDT3O95989 172 aa8.11□□□□□ -1.11
SH3RF1-205ENST00000511421 MUC21Q5SSG8 566 aa8.11□□□□□ -1.11
SH3RF1-205ENST00000511421 C5orf17Q8NAS9 161 aa8.11□□□□□ -1.11
SH3RF1-205ENST00000511421 NACAE9PAV3 2078 aa8.11□□□□□ -1.11
SH3RF1-205ENST00000511421 TRAV26-1A0A087WT03 109 aa8.1□□□□□ -1.11
SH3RF1-205ENST00000511421 CTXND1A0A1B0GTU2 59 aa8.1□□□□□ -1.11
SH3RF1-205ENST00000511421 GGTLC3B5MD39 225 aa8.1□□□□□ -1.11
SH3RF1-205ENST00000511421 M0R2N4 97 aa8.1□□□□□ -1.11
SH3RF1-205ENST00000511421 TCRAP04437 139 aa8.1□□□□□ -1.11
SH3RF1-205ENST00000511421 SUMO1P63165 101 aaKnown RBP8.1□□□□□ -1.11
SH3RF1-205ENST00000511421 LGALS9BQ3B8N2 356 aa8.1□□□□□ -1.11
SH3RF1-205ENST00000511421 OR11H4Q8NGC9 324 aa8.1□□□□□ -1.11
SH3RF1-205ENST00000511421 FAT2Q9NYQ8 4349 aa8.1□□□□□ -1.11
SH3RF1-205ENST00000511421 MUC4Q99102 2169 aa8.09□□□□□ -1.11
SH3RF1-205ENST00000511421 IGLV2-18A0A075B6J9 118 aa8.09□□□□□ -1.11
SH3RF1-205ENST00000511421 TRGV2A0A075B6R0 118 aa8.09□□□□□ -1.11
SH3RF1-205ENST00000511421 SERTM2A0A1B0GWG4 89 aa8.09□□□□□ -1.11
SH3RF1-205ENST00000511421 FAM3BP58499 235 aaPredicted RBP8.09□□□□□ -1.11
SH3RF1-205ENST00000511421 TDRG1Q3Y452 100 aa8.09□□□□□ -1.11
SH3RF1-205ENST00000511421 Q6ZR54 194 aa8.09□□□□□ -1.11
SH3RF1-205ENST00000511421 KCNRGQ8N5I3 272 aa8.09□□□□□ -1.11
SH3RF1-205ENST00000511421 SGK494Q96LW2 274 aa8.09□□□□□ -1.11
SH3RF1-205ENST00000511421 TREM1Q9NP99 234 aa8.09□□□□□ -1.11
SH3RF1-205ENST00000511421 MDFICQ9P1T7 246 aa8.09□□□□□ -1.11
SH3RF1-205ENST00000511421 EPDR1Q9UM22 224 aa8.09□□□□□ -1.11
SH3RF1-205ENST00000511421 A0A0J9YY99 117 aa8.08□□□□□ -1.12
SH3RF1-205ENST00000511421 A0A1W2PRE2 83 aa8.08□□□□□ -1.12
SH3RF1-205ENST00000511421 HMSDA8MTL9 139 aa8.08□□□□□ -1.12
SH3RF1-205ENST00000511421 IGLV2-11P01706 119 aa8.08□□□□□ -1.12
SH3RF1-205ENST00000511421 ZNF415Q09FC8 603 aa8.08□□□□□ -1.12
SH3RF1-205ENST00000511421 ZNF345Q14585 488 aa8.08□□□□□ -1.12
SH3RF1-205ENST00000511421 AKR1C8PQ5T2L2 129 aa8.08□□□□□ -1.12
SH3RF1-205ENST00000511421 ATG101Q9BSB4 218 aa8.08□□□□□ -1.12
SH3RF1-205ENST00000511421 MRPL16Q9NX20 251 aaKnown RBP8.08□□□□□ -1.12
SH3RF1-205ENST00000511421 HECTD4Q9Y4D8 3996 aa8.08□□□□□ -1.12
SH3RF1-205ENST00000511421 TRAV21A0A0B4J279 112 aa8.08□□□□□ -1.12
SH3RF1-205ENST00000511421 F6UZH7 168 aa8.08□□□□□ -1.12
SH3RF1-205ENST00000511421 H3BNG1 76 aa8.08□□□□□ -1.12
SH3RF1-205ENST00000511421 TMEM183BQ1AE95 376 aa8.08□□□□□ -1.12
SH3RF1-205ENST00000511421 FAM159AQ6UWV7 190 aa8.08□□□□□ -1.12
SH3RF1-205ENST00000511421 TMEM183AQ8IXX5 376 aa8.08□□□□□ -1.12
SH3RF1-205ENST00000511421 VSIG2Q96IQ7 327 aa8.08□□□□□ -1.12
SH3RF1-205ENST00000511421 LINC00588Q9Y4M8 146 aa8.08□□□□□ -1.12
SH3RF1-205ENST00000511421 TRGV11A0A075B6L2 103 aa8.07□□□□□ -1.12
SH3RF1-205ENST00000511421 RTL8CO15255 209 aa8.07□□□□□ -1.12
SH3RF1-205ENST00000511421 FGF8P55075 233 aaPredicted RBP8.07□□□□□ -1.12
SH3RF1-205ENST00000511421 CCL18P55774 89 aa8.07□□□□□ -1.12
SH3RF1-205ENST00000511421 IQCF2Q8IXL9 164 aa8.07□□□□□ -1.12
SH3RF1-205ENST00000511421 ZNRF2Q8NHG8 242 aa8.07□□□□□ -1.12
SH3RF1-205ENST00000511421 C8orf49Q96NF6 230 aa8.07□□□□□ -1.12
SH3RF1-205ENST00000511421 PSG8Q9UQ74 426 aa8.07□□□□□ -1.12
SH3RF1-205ENST00000511421 K7EQM0 130 aa8.06□□□□□ -1.12
SH3RF1-205ENST00000511421 GNRH2O43555 120 aa8.06□□□□□ -1.12
SH3RF1-205ENST00000511421 ZNF80P51504 273 aaPredicted RBP8.06□□□□□ -1.12
SH3RF1-205ENST00000511421 FLI1Q01543 452 aaPredicted RBP8.06□□□□□ -1.12
SH3RF1-205ENST00000511421 LINC00336Q6ZUF6 198 aa8.06□□□□□ -1.12
SH3RF1-205ENST00000511421 CYB561D1Q8N8Q1 229 aa8.06□□□□□ -1.12
SH3RF1-205ENST00000511421 TMEM75Q8N9X5 138 aa8.06□□□□□ -1.12
SH3RF1-205ENST00000511421 SPXQ9BT56 116 aa8.06□□□□□ -1.12
SH3RF1-205ENST00000511421 NAGKQ9UJ70 344 aa8.06□□□□□ -1.12
SH3RF1-205ENST00000511421 IGHV3-16A0A0C4DH30 117 aa8.05□□□□□ -1.12
SH3RF1-205ENST00000511421 A0A0D9SG52 128 aa8.05□□□□□ -1.12
SH3RF1-205ENST00000511421 MAP1LC3B2A6NCE7 125 aa8.05□□□□□ -1.12
SH3RF1-205ENST00000511421 FAM74A7A6NL05 159 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms