RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 CACYBPQ9HB71 228 aaKnown RBP1.94□□□□□ -2.1
HMGB1P47-201ENST00000511281 NUP210LQ5VU65 1888 aa1.94□□□□□ -2.1
HMGB1P47-201ENST00000511281 TRPM7Q96QT4 1865 aa1.94□□□□□ -2.1
HMGB1P47-201ENST00000511281 SPEF2Q9C093 1822 aa1.94□□□□□ -2.1
HMGB1P47-201ENST00000511281 SSC5DA1L4H1 1573 aa1.93□□□□□ -2.1
HMGB1P47-201ENST00000511281 PAPPA2Q9BXP8 1791 aa1.93□□□□□ -2.1
HMGB1P47-201ENST00000511281 IGKV3D-7A0A0C4DH55 119 aa1.93□□□□□ -2.1
HMGB1P47-201ENST00000511281 IGKV3OR2-268A0A0C4DH90 116 aa1.93□□□□□ -2.1
HMGB1P47-201ENST00000511281 GNG14A0A1W2PPG7 69 aa1.93□□□□□ -2.1
HMGB1P47-201ENST00000511281 PRORSD1PA6NEY8 169 aa1.93□□□□□ -2.1
HMGB1P47-201ENST00000511281 E7EUB6 86 aa1.93□□□□□ -2.1
HMGB1P47-201ENST00000511281 C17orf112F2Z3M2 114 aa1.93□□□□□ -2.1
HMGB1P47-201ENST00000511281 HIST1H2BKO60814 126 aa1.93□□□□□ -2.1
HMGB1P47-201ENST00000511281 IGLV1-51P01701 117 aa1.93□□□□□ -2.1
HMGB1P47-201ENST00000511281 HIST1H2BJP06899 126 aa1.93□□□□□ -2.1
HMGB1P47-201ENST00000511281 OR10J4P0C629 311 aa1.93□□□□□ -2.1
HMGB1P47-201ENST00000511281 IFT20Q8IY31 132 aa1.93□□□□□ -2.1
HMGB1P47-201ENST00000511281 OR2T35Q8NGX2 323 aa1.93□□□□□ -2.1
HMGB1P47-201ENST00000511281 RETNLBQ9BQ08 111 aa1.93□□□□□ -2.1
HMGB1P47-201ENST00000511281 OTORQ9NRC9 128 aa1.93□□□□□ -2.1
HMGB1P47-201ENST00000511281 NDUFAF1Q9Y375 327 aa1.93□□□□□ -2.1
HMGB1P47-201ENST00000511281 MYOFQ9NZM1 2061 aa1.93□□□□□ -2.1
HMGB1P47-201ENST00000511281 PCNTO95613 3336 aa1.93□□□□□ -2.1
HMGB1P47-201ENST00000511281 LOC110117498A0A087WWA1 95 aa1.92□□□□□ -2.1
HMGB1P47-201ENST00000511281 TRDV1A0A1B0GX56 115 aa1.92□□□□□ -2.1
HMGB1P47-201ENST00000511281 H7BYZ3 331 aa1.92□□□□□ -2.1
HMGB1P47-201ENST00000511281 IFNA4P05014 189 aa1.92□□□□□ -2.1
HMGB1P47-201ENST00000511281 GNG11P61952 73 aa1.92□□□□□ -2.1
HMGB1P47-201ENST00000511281 HBBP68871 147 aa1.92□□□□□ -2.1
HMGB1P47-201ENST00000511281 MSMO1Q15800 293 aa1.92□□□□□ -2.1
HMGB1P47-201ENST00000511281 OR5D16Q8NGK9 328 aa1.92□□□□□ -2.1
HMGB1P47-201ENST00000511281 TMEM254Q8TBM7 123 aa1.92□□□□□ -2.1
HMGB1P47-201ENST00000511281 THEM6Q8WUY1 208 aa1.92□□□□□ -2.1
HMGB1P47-201ENST00000511281 RMND5BQ96G75 393 aaPredicted RBP1.92□□□□□ -2.1
HMGB1P47-201ENST00000511281 LRTM1Q9HBL6 345 aa1.92□□□□□ -2.1
HMGB1P47-201ENST00000511281 MRPL40Q9NQ50 206 aaKnown RBP1.92□□□□□ -2.1
HMGB1P47-201ENST00000511281 RP1L1Q8IWN7 2480 aaPredicted RBP1.92□□□□□ -2.1
HMGB1P47-201ENST00000511281 PSME4Q14997 1843 aa1.91□□□□□ -2.1
HMGB1P47-201ENST00000511281 PRRC2BQ5JSZ5 2229 aaKnown RBP1.91□□□□□ -2.1
HMGB1P47-201ENST00000511281 CASP8AP2Q9UKL3 1982 aa1.91□□□□□ -2.1
HMGB1P47-201ENST00000511281 TCRBV4S1A1TA0A5B7 111 aa1.91□□□□□ -2.1
HMGB1P47-201ENST00000511281 ODAMA1E959 279 aa1.91□□□□□ -2.1
HMGB1P47-201ENST00000511281 B4DSR2 109 aa1.91□□□□□ -2.1
HMGB1P47-201ENST00000511281 CST7O76096 145 aa1.91□□□□□ -2.1
HMGB1P47-201ENST00000511281 BCL2P10415 239 aa1.91□□□□□ -2.1
HMGB1P47-201ENST00000511281 WHAMMP3Q1A5X7 153 aa1.91□□□□□ -2.1
HMGB1P47-201ENST00000511281 TMEM128Q5BJH2 165 aa1.91□□□□□ -2.1
HMGB1P47-201ENST00000511281 KRTAP26-1Q6PEX3 210 aa1.91□□□□□ -2.1
HMGB1P47-201ENST00000511281 BORCS8Q96FH0 119 aa1.91□□□□□ -2.1
HMGB1P47-201ENST00000511281 RASL12Q9NYN1 266 aa1.91□□□□□ -2.1
HMGB1P47-201ENST00000511281 LAMTOR2Q9Y2Q5 125 aa1.91□□□□□ -2.1
HMGB1P47-201ENST00000511281 FAM107AO95990 144 aa1.9□□□□□ -2.11
HMGB1P47-201ENST00000511281 RPL35P42766 123 aaKnown RBP1.9□□□□□ -2.11
HMGB1P47-201ENST00000511281 RAB5CP51148 216 aa1.9□□□□□ -2.11
HMGB1P47-201ENST00000511281 ZNF720Q7Z2F6 126 aa1.9□□□□□ -2.11
HMGB1P47-201ENST00000511281 Q8N814 137 aa1.9□□□□□ -2.11
HMGB1P47-201ENST00000511281 ZNF714Q96N38 554 aa1.9□□□□□ -2.11
HMGB1P47-201ENST00000511281 LXNQ9BS40 222 aa1.9□□□□□ -2.11
HMGB1P47-201ENST00000511281 EFCAB11Q9BUY7 163 aa1.9□□□□□ -2.11
HMGB1P47-201ENST00000511281 MUC6Q6W4X9 2439 aa1.9□□□□□ -2.11
HMGB1P47-201ENST00000511281 A0A1B0GUL6 1792 aa1.9□□□□□ -2.11
HMGB1P47-201ENST00000511281 MED13Q9UHV7 2174 aa1.89□□□□□ -2.11
HMGB1P47-201ENST00000511281 EXPH5Q8NEV8 1989 aa1.89□□□□□ -2.11
HMGB1P47-201ENST00000511281 A0A087WX48 190 aa1.89□□□□□ -2.11
HMGB1P47-201ENST00000511281 TRBV6-8A0A0A6YYG3 113 aa1.89□□□□□ -2.11
HMGB1P47-201ENST00000511281 M0R2N4 97 aa1.89□□□□□ -2.11
HMGB1P47-201ENST00000511281 RER1O15258 196 aa1.89□□□□□ -2.11
HMGB1P47-201ENST00000511281 SNRPFP62306 86 aaKnown RBP1.89□□□□□ -2.11
HMGB1P47-201ENST00000511281 KLRD1Q13241 179 aa1.89□□□□□ -2.11
HMGB1P47-201ENST00000511281 C4orf22Q6V702 233 aa1.89□□□□□ -2.11
HMGB1P47-201ENST00000511281 ZNF833PQ6ZTB9 187 aa1.89□□□□□ -2.11
HMGB1P47-201ENST00000511281 AKAP14Q86UN6 197 aa1.89□□□□□ -2.11
HMGB1P47-201ENST00000511281 POP5Q969H6 163 aaKnown RBP1.89□□□□□ -2.11
HMGB1P47-201ENST00000511281 CHCHD1Q96BP2 118 aaKnown RBP1.89□□□□□ -2.11
HMGB1P47-201ENST00000511281 NAT8BQ9UHF3 227 aa1.89□□□□□ -2.11
HMGB1P47-201ENST00000511281 SCN3AQ9NY46 2000 aa1.89□□□□□ -2.11
HMGB1P47-201ENST00000511281 AKAP11Q9UKA4 1901 aa1.89□□□□□ -2.11
HMGB1P47-201ENST00000511281 ARAP2Q8WZ64 1704 aa1.88□□□□□ -2.11
HMGB1P47-201ENST00000511281 LAMB1P07942 1786 aa1.88□□□□□ -2.11
HMGB1P47-201ENST00000511281 ZNF736B4DX44 427 aaPredicted RBP1.88□□□□□ -2.11
HMGB1P47-201ENST00000511281 K7ERJ3 54 aa1.88□□□□□ -2.11
HMGB1P47-201ENST00000511281 POLR2HP52434 150 aaKnown RBP1.88□□□□□ -2.11
HMGB1P47-201ENST00000511281 EIF3IQ13347 325 aaKnown RBP1.88□□□□□ -2.11
HMGB1P47-201ENST00000511281 C1orf134Q5TEV5 83 aa1.88□□□□□ -2.11
HMGB1P47-201ENST00000511281 CROCCP2Q86T23 111 aa1.88□□□□□ -2.11
HMGB1P47-201ENST00000511281 MMGT1Q8N4V1 131 aa1.88□□□□□ -2.11
HMGB1P47-201ENST00000511281 OR5D14Q8NGL3 314 aa1.88□□□□□ -2.11
HMGB1P47-201ENST00000511281 OR9Q1Q8NGQ5 310 aa1.88□□□□□ -2.11
HMGB1P47-201ENST00000511281 OR4K15Q8NH41 348 aa1.88□□□□□ -2.11
HMGB1P47-201ENST00000511281 TP53RKQ96S44 253 aa1.88□□□□□ -2.11
HMGB1P47-201ENST00000511281 KLK9Q9UKQ9 250 aa1.88□□□□□ -2.11
HMGB1P47-201ENST00000511281 SNURFQ9Y675 71 aa1.88□□□□□ -2.11
HMGB1P47-201ENST00000511281 BRCA2P51587 3418 aa1.88□□□□□ -2.11
HMGB1P47-201ENST00000511281 RBBP6Q7Z6E9 1792 aaKnown RBP1.87□□□□□ -2.11
HMGB1P47-201ENST00000511281 IGKV3-7A0A075B6H7 116 aa1.87□□□□□ -2.11
HMGB1P47-201ENST00000511281 IGKV2-40A0A087WW87 121 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P47-201ENST00000511281 IGKV2D-26A0A0A0MRZ7 120 aa1.87□□□□□ -2.11
HMGB1P47-201ENST00000511281 IGKV2-29A2NJV5 120 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P47-201ENST00000511281 TSTD3H0UI37 97 aa1.87□□□□□ -2.11
HMGB1P47-201ENST00000511281 H3BQF6 201 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms