RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 PPP1R1CQ8WVI7 109 aa9.41□□□□□ -0.9
CCHCR1-227ENST00000508852 TMED6Q8WW62 240 aa9.41□□□□□ -0.9
CCHCR1-227ENST00000508852 VGLL1Q99990 258 aa9.41□□□□□ -0.9
CCHCR1-227ENST00000508852 PCLOQ9Y6V0 5065 aa9.4□□□□□ -0.9
CCHCR1-227ENST00000508852 A0A096LPF7 62 aa9.4□□□□□ -0.9
CCHCR1-227ENST00000508852 K7EP13 123 aa9.4□□□□□ -0.9
CCHCR1-227ENST00000508852 OR10J4P0C629 311 aa9.4□□□□□ -0.9
CCHCR1-227ENST00000508852 UBE2L3P68036 154 aaKnown RBP9.4□□□□□ -0.9
CCHCR1-227ENST00000508852 MRPL23Q16540 153 aaKnown RBP9.4□□□□□ -0.9
CCHCR1-227ENST00000508852 VSIG2Q96IQ7 327 aa9.4□□□□□ -0.9
CCHCR1-227ENST00000508852 SPXQ9BT56 116 aa9.4□□□□□ -0.9
CCHCR1-227ENST00000508852 PTTG2Q9NZH5 202 aa9.4□□□□□ -0.9
CCHCR1-227ENST00000508852 HSPB11Q9Y547 144 aa9.4□□□□□ -0.9
CCHCR1-227ENST00000508852 TRGV11A0A075B6L2 103 aa9.39□□□□□ -0.91
CCHCR1-227ENST00000508852 TRAV9-2A0A087WT02 112 aa9.39□□□□□ -0.91
CCHCR1-227ENST00000508852 H0YIZ8 118 aa9.39□□□□□ -0.91
CCHCR1-227ENST00000508852 SIVA1O15304 175 aa9.39□□□□□ -0.91
CCHCR1-227ENST00000508852 MPC2O95563 127 aa9.39□□□□□ -0.91
CCHCR1-227ENST00000508852 RPL12P30050 165 aaKnown RBP9.39□□□□□ -0.91
CCHCR1-227ENST00000508852 RANP62826 216 aaKnown RBP9.39□□□□□ -0.91
CCHCR1-227ENST00000508852 FFAR4Q5NUL3 377 aa9.39□□□□□ -0.91
CCHCR1-227ENST00000508852 FAM159AQ6UWV7 190 aa9.39□□□□□ -0.91
CCHCR1-227ENST00000508852 CMTM2Q8TAZ6 248 aa9.39□□□□□ -0.91
CCHCR1-227ENST00000508852 HHLA3Q9XRX5 114 aa9.39□□□□□ -0.91
CCHCR1-227ENST00000508852 EREGO14944 169 aa9.38□□□□□ -0.91
CCHCR1-227ENST00000508852 H2BFSP57053 126 aa9.38□□□□□ -0.91
CCHCR1-227ENST00000508852 ACOT6Q3I5F7 207 aaPredicted RBP9.38□□□□□ -0.91
CCHCR1-227ENST00000508852 Q6AWC8 147 aa9.38□□□□□ -0.91
CCHCR1-227ENST00000508852 PQLC2Q6ZP29 291 aa9.38□□□□□ -0.91
CCHCR1-227ENST00000508852 NFE4Q86UQ8 179 aa9.38□□□□□ -0.91
CCHCR1-227ENST00000508852 IQCF2Q8IXL9 164 aa9.38□□□□□ -0.91
CCHCR1-227ENST00000508852 PHYHIPLQ96FC7 376 aa9.38□□□□□ -0.91
CCHCR1-227ENST00000508852 OTORQ9NRC9 128 aa9.38□□□□□ -0.91
CCHCR1-227ENST00000508852 TP53TG3Q9ULZ0 132 aa9.38□□□□□ -0.91
CCHCR1-227ENST00000508852 BOLA1Q9Y3E2 137 aa9.38□□□□□ -0.91
CCHCR1-227ENST00000508852 A0A1W2PPV4 95 aa9.37□□□□□ -0.91
CCHCR1-227ENST00000508852 DIRC3C9JPN6 131 aa9.37□□□□□ -0.91
CCHCR1-227ENST00000508852 ORM1P02763 201 aa9.37□□□□□ -0.91
CCHCR1-227ENST00000508852 NEGR1Q7Z3B1 354 aa9.37□□□□□ -0.91
CCHCR1-227ENST00000508852 SPATA12Q7Z6I5 190 aa9.37□□□□□ -0.91
CCHCR1-227ENST00000508852 PCNPQ8WW12 178 aaKnown RBP9.37□□□□□ -0.91
CCHCR1-227ENST00000508852 TRGV4A0A0C4DH28 118 aa9.36□□□□□ -0.91
CCHCR1-227ENST00000508852 SERTM2A0A1B0GWG4 89 aa9.36□□□□□ -0.91
CCHCR1-227ENST00000508852 CRYBA4P53673 196 aa9.36□□□□□ -0.91
CCHCR1-227ENST00000508852 TDRG1Q3Y452 100 aa9.36□□□□□ -0.91
CCHCR1-227ENST00000508852 PRR9Q5T870 116 aa9.36□□□□□ -0.91
CCHCR1-227ENST00000508852 SH2D6Q7Z4S9 175 aa9.36□□□□□ -0.91
CCHCR1-227ENST00000508852 OR10G4Q8NGN3 311 aa9.36□□□□□ -0.91
CCHCR1-227ENST00000508852 RASL10AQ92737 203 aa9.36□□□□□ -0.91
CCHCR1-227ENST00000508852 MRPL16Q9NX20 251 aaKnown RBP9.36□□□□□ -0.91
CCHCR1-227ENST00000508852 MBD2Q9UBB5 411 aa9.36□□□□□ -0.91
CCHCR1-227ENST00000508852 TRAV21A0A0B4J279 112 aa9.35□□□□□ -0.91
CCHCR1-227ENST00000508852 A6NHS1 94 aa9.35□□□□□ -0.91
CCHCR1-227ENST00000508852 NXPH4O95158 308 aa9.35□□□□□ -0.91
CCHCR1-227ENST00000508852 SRIP30626 198 aa9.35□□□□□ -0.91
CCHCR1-227ENST00000508852 FHL2Q14192 279 aa9.35□□□□□ -0.91
CCHCR1-227ENST00000508852 Q8TAT8 98 aa9.35□□□□□ -0.91
CCHCR1-227ENST00000508852 KCNS1Q96KK3 526 aa9.35□□□□□ -0.91
CCHCR1-227ENST00000508852 TXNDC17Q9BRA2 123 aa9.35□□□□□ -0.91
CCHCR1-227ENST00000508852 KRTAP1-5Q9BYS1 174 aa9.35□□□□□ -0.91
CCHCR1-227ENST00000508852 PGPA6NDG6 321 aa9.34□□□□□ -0.91
CCHCR1-227ENST00000508852 C9JCJ5 164 aa9.34□□□□□ -0.91
CCHCR1-227ENST00000508852 CIDEAO60543 219 aa9.34□□□□□ -0.91
CCHCR1-227ENST00000508852 IGHV3-53P01767 116 aa9.34□□□□□ -0.91
CCHCR1-227ENST00000508852 IFITM3Q01628 133 aa9.34□□□□□ -0.91
CCHCR1-227ENST00000508852 NDFIP1Q9BT67 221 aa9.34□□□□□ -0.91
CCHCR1-227ENST00000508852 PGPEP1Q9NXJ5 209 aa9.34□□□□□ -0.91
CCHCR1-227ENST00000508852 TRAV4A0A0B4J268 109 aa9.33□□□□□ -0.92
CCHCR1-227ENST00000508852 K7EQM0 130 aa9.33□□□□□ -0.92
CCHCR1-227ENST00000508852 MBP02144 154 aa9.33□□□□□ -0.92
CCHCR1-227ENST00000508852 LINC00315P59091 139 aa9.33□□□□□ -0.92
CCHCR1-227ENST00000508852 ERVFC1-1P60608 527 aa9.33□□□□□ -0.92
CCHCR1-227ENST00000508852 TMEM183BQ1AE95 376 aa9.33□□□□□ -0.92
CCHCR1-227ENST00000508852 MUC21Q5SSG8 566 aa9.33□□□□□ -0.92
CCHCR1-227ENST00000508852 LYPD5Q6UWN5 251 aa9.33□□□□□ -0.92
CCHCR1-227ENST00000508852 TMEM183AQ8IXX5 376 aa9.33□□□□□ -0.92
CCHCR1-227ENST00000508852 HYLS1Q96M11 299 aa9.33□□□□□ -0.92
CCHCR1-227ENST00000508852 C8orf49Q96NF6 230 aa9.33□□□□□ -0.92
CCHCR1-227ENST00000508852 SMIM3Q9BZL3 60 aa9.33□□□□□ -0.92
CCHCR1-227ENST00000508852 LY96Q9Y6Y9 160 aa9.33□□□□□ -0.92
CCHCR1-227ENST00000508852 RYR1P21817 5038 aa9.33□□□□□ -0.92
CCHCR1-227ENST00000508852 FBLL1A6NHQ2 334 aaKnown RBP9.32□□□□□ -0.92
CCHCR1-227ENST00000508852 M0R2P5 195 aa9.32□□□□□ -0.92
CCHCR1-227ENST00000508852 EVI2AP22794 236 aa9.32□□□□□ -0.92
CCHCR1-227ENST00000508852 CDPF1Q6NVV7 123 aa9.32□□□□□ -0.92
CCHCR1-227ENST00000508852 MAPKAPK5-AS1Q8N8E1 139 aa9.32□□□□□ -0.92
CCHCR1-227ENST00000508852 OR10G9Q8NGN4 311 aa9.32□□□□□ -0.92
CCHCR1-227ENST00000508852 OR10G7Q8NGN6 311 aa9.32□□□□□ -0.92
CCHCR1-227ENST00000508852 SDF2L1Q9HCN8 221 aa9.32□□□□□ -0.92
CCHCR1-227ENST00000508852 MDFICQ9P1T7 246 aa9.32□□□□□ -0.92
CCHCR1-227ENST00000508852 K7EQD1 137 aa9.31□□□□□ -0.92
CCHCR1-227ENST00000508852 C10orf126Q8N4M7 172 aa9.31□□□□□ -0.92
CCHCR1-227ENST00000508852 OR4C5Q8NGB2 326 aa9.31□□□□□ -0.92
CCHCR1-227ENST00000508852 ASB13Q8WXK3 278 aa9.31□□□□□ -0.92
CCHCR1-227ENST00000508852 TREM1Q9NP99 234 aa9.31□□□□□ -0.92
CCHCR1-227ENST00000508852 BATF3Q9NR55 127 aa9.31□□□□□ -0.92
CCHCR1-227ENST00000508852 HSPG2P98160 4391 aa9.31□□□□□ -0.92
CCHCR1-227ENST00000508852 LRP1BQ9NZR2 4599 aa9.31□□□□□ -0.92
CCHCR1-227ENST00000508852 SERF2P84101 59 aa9.3□□□□□ -0.92
CCHCR1-227ENST00000508852 GOLT1AQ6ZVE7 132 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms