RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 OR2D3Q8NGH3 330 aa6.07□□□□□ -1.44
TOPBP1-202ENST00000503338 FAM19A4Q96LR4 140 aa6.07□□□□□ -1.44
TOPBP1-202ENST00000503338 C8orf49Q96NF6 230 aa6.07□□□□□ -1.44
TOPBP1-202ENST00000503338 YPEL4Q96NS1 127 aa6.07□□□□□ -1.44
TOPBP1-202ENST00000503338 PYGO2Q9BRQ0 406 aa6.07□□□□□ -1.44
TOPBP1-202ENST00000503338 NAT8BQ9UHF3 227 aa6.07□□□□□ -1.44
TOPBP1-202ENST00000503338 URGCP-MRPS24S4R325 110 aa6.07□□□□□ -1.44
TOPBP1-202ENST00000503338 HLA-DRB4X5D2U9 266 aa6.07□□□□□ -1.44
TOPBP1-202ENST00000503338 JMJD1CQ15652 2540 aa6.07□□□□□ -1.44
TOPBP1-202ENST00000503338 A0A1W2PPQ1 181 aa6.06□□□□□ -1.44
TOPBP1-202ENST00000503338 TMEM189A5PLL7 270 aa6.06□□□□□ -1.44
TOPBP1-202ENST00000503338 IZUMO1RA6ND01 250 aa6.06□□□□□ -1.44
TOPBP1-202ENST00000503338 A8MTW9 85 aa6.06□□□□□ -1.44
TOPBP1-202ENST00000503338 SH2D1AO60880 128 aa6.06□□□□□ -1.44
TOPBP1-202ENST00000503338 AMBPP02760 352 aa6.06□□□□□ -1.44
TOPBP1-202ENST00000503338 TYMSP04818 313 aa6.06□□□□□ -1.44
TOPBP1-202ENST00000503338 GPX1P07203 203 aa6.06□□□□□ -1.44
TOPBP1-202ENST00000503338 CXCL1P09341 107 aa6.06□□□□□ -1.44
TOPBP1-202ENST00000503338 RAB5AP20339 215 aa6.06□□□□□ -1.44
TOPBP1-202ENST00000503338 FOXA3P55318 350 aaPredicted RBP6.06□□□□□ -1.44
TOPBP1-202ENST00000503338 FAM3BP58499 235 aaPredicted RBP6.06□□□□□ -1.44
TOPBP1-202ENST00000503338 LINC01559Q495D7 138 aa6.06□□□□□ -1.44
TOPBP1-202ENST00000503338 RASL11AQ6T310 242 aa6.06□□□□□ -1.44
TOPBP1-202ENST00000503338 LINC00322Q6ZN03 302 aaPredicted RBP6.06□□□□□ -1.44
TOPBP1-202ENST00000503338 ZFAND2AQ8N6M9 145 aa6.06□□□□□ -1.44
TOPBP1-202ENST00000503338 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.06□□□□□ -1.44
TOPBP1-202ENST00000503338 FAM210BQ96KR6 192 aa6.06□□□□□ -1.44
TOPBP1-202ENST00000503338 MAP6D1Q9H9H5 199 aa6.06□□□□□ -1.44
TOPBP1-202ENST00000503338 ZMAT5Q9UDW3 170 aaKnown RBP6.06□□□□□ -1.44
TOPBP1-202ENST00000503338 SETXQ7Z333 2677 aaKnown RBP6.06□□□□□ -1.44
TOPBP1-202ENST00000503338 SETD2Q9BYW2 2564 aaPredicted RBP6.05□□□□□ -1.44
TOPBP1-202ENST00000503338 KLLNB2CW77 178 aa6.05□□□□□ -1.44
TOPBP1-202ENST00000503338 F6UB75 175 aa6.05□□□□□ -1.44
TOPBP1-202ENST00000503338 H3BMM0 161 aa6.05□□□□□ -1.44
TOPBP1-202ENST00000503338 ZNF705DP0CH99 300 aaPredicted RBP6.05□□□□□ -1.44
TOPBP1-202ENST00000503338 ZNF705BP0CI00 300 aaPredicted RBP6.05□□□□□ -1.44
TOPBP1-202ENST00000503338 CDKN1BP46527 198 aa6.05□□□□□ -1.44
TOPBP1-202ENST00000503338 CRIP1P50238 77 aa6.05□□□□□ -1.44
TOPBP1-202ENST00000503338 NUTF2P61970 127 aaKnown RBP6.05□□□□□ -1.44
TOPBP1-202ENST00000503338 BEAN1Q3B7T3 259 aa6.05□□□□□ -1.44
TOPBP1-202ENST00000503338 ATP5L2Q7Z4Y8 100 aa6.05□□□□□ -1.44
TOPBP1-202ENST00000503338 BORCS7Q96B45 105 aa6.05□□□□□ -1.44
TOPBP1-202ENST00000503338 SRD5A3Q9H8P0 318 aa6.05□□□□□ -1.44
TOPBP1-202ENST00000503338 SELENOKQ9Y6D0 94 aa6.05□□□□□ -1.44
TOPBP1-202ENST00000503338 CUBNO60494 3623 aa6.05□□□□□ -1.44
TOPBP1-202ENST00000503338 WNK1Q9H4A3 2382 aa6.04□□□□□ -1.44
TOPBP1-202ENST00000503338 TGIF2-C20orf24A0A0A6YYL0 155 aa6.04□□□□□ -1.44
TOPBP1-202ENST00000503338 A0A1B0GW15 77 aa6.04□□□□□ -1.44
TOPBP1-202ENST00000503338 C7orf71A4D174 169 aa6.04□□□□□ -1.44
TOPBP1-202ENST00000503338 HIGD1CA8MV81 97 aa6.04□□□□□ -1.44
TOPBP1-202ENST00000503338 WIPF1O43516 503 aa6.04□□□□□ -1.44
TOPBP1-202ENST00000503338 ORM1P02763 201 aa6.04□□□□□ -1.44
TOPBP1-202ENST00000503338 MT-ND6P03923 174 aa6.04□□□□□ -1.44
TOPBP1-202ENST00000503338 S100A8P05109 93 aa6.04□□□□□ -1.44
TOPBP1-202ENST00000503338 ODF3L2Q3SX64 289 aa6.04□□□□□ -1.44
TOPBP1-202ENST00000503338 ACTL10Q5JWF8 245 aa6.04□□□□□ -1.44
TOPBP1-202ENST00000503338 WDR73Q6P4I2 378 aa6.04□□□□□ -1.44
TOPBP1-202ENST00000503338 GTSCR1Q86UQ5 136 aa6.04□□□□□ -1.44
TOPBP1-202ENST00000503338 STHQ8IWL8 128 aa6.04□□□□□ -1.44
TOPBP1-202ENST00000503338 KCNS1Q96KK3 526 aa6.04□□□□□ -1.44
TOPBP1-202ENST00000503338 NEU1Q99519 415 aa6.04□□□□□ -1.44
TOPBP1-202ENST00000503338 C20orf144Q9BQM9 153 aa6.04□□□□□ -1.44
TOPBP1-202ENST00000503338 NF1P21359 2839 aa6.03□□□□□ -1.44
TOPBP1-202ENST00000503338 C1orf196B1AJZ1 125 aa6.03□□□□□ -1.44
TOPBP1-202ENST00000503338 F2Z2F3 143 aa6.03□□□□□ -1.44
TOPBP1-202ENST00000503338 RPS10P46783 165 aaKnown RBP6.03□□□□□ -1.44
TOPBP1-202ENST00000503338 ZNF80P51504 273 aaPredicted RBP6.03□□□□□ -1.44
TOPBP1-202ENST00000503338 GDF5OSQ5U4N7 250 aa6.03□□□□□ -1.44
TOPBP1-202ENST00000503338 NUP35Q8NFH5 326 aa6.03□□□□□ -1.44
TOPBP1-202ENST00000503338 A0A1B0GUT8 65 aa6.02□□□□□ -1.45
TOPBP1-202ENST00000503338 KNCNA6PVL3 124 aa6.02□□□□□ -1.45
TOPBP1-202ENST00000503338 CA1P00915 261 aaPredicted RBP6.02□□□□□ -1.45
TOPBP1-202ENST00000503338 HLA-DQA1P01909 254 aa6.02□□□□□ -1.45
TOPBP1-202ENST00000503338 MED14OSP0DP75 135 aa6.02□□□□□ -1.45
TOPBP1-202ENST00000503338 PRB4P10163 310 aaPredicted RBP6.02□□□□□ -1.45
TOPBP1-202ENST00000503338 RNASE4P34096 147 aaKnown RBP6.02□□□□□ -1.45
TOPBP1-202ENST00000503338 TCL1AP56279 114 aa6.02□□□□□ -1.45
TOPBP1-202ENST00000503338 DEFB1P60022 68 aa6.02□□□□□ -1.45
TOPBP1-202ENST00000503338 HBBP68871 147 aa6.02□□□□□ -1.45
TOPBP1-202ENST00000503338 RIGQ13278 110 aa6.02□□□□□ -1.45
TOPBP1-202ENST00000503338 PRR31Q5SQ13 230 aa6.02□□□□□ -1.45
TOPBP1-202ENST00000503338 FAM159AQ6UWV7 190 aa6.02□□□□□ -1.45
TOPBP1-202ENST00000503338 AMTNQ6UX39 209 aa6.02□□□□□ -1.45
TOPBP1-202ENST00000503338 FER1L6-AS1Q8NA97 138 aa6.02□□□□□ -1.45
TOPBP1-202ENST00000503338 GNB1LQ9BYB4 327 aa6.02□□□□□ -1.45
TOPBP1-202ENST00000503338 IGKV3D-20A0A0C4DH25 116 aa6.01□□□□□ -1.45
TOPBP1-202ENST00000503338 J3KRW8 73 aa6.01□□□□□ -1.45
TOPBP1-202ENST00000503338 IGKV3-20P01619 116 aa6.01□□□□□ -1.45
TOPBP1-202ENST00000503338 OR5AL1P0C617 328 aa6.01□□□□□ -1.45
TOPBP1-202ENST00000503338 CTRLP40313 264 aa6.01□□□□□ -1.45
TOPBP1-202ENST00000503338 ASIPP42127 132 aa6.01□□□□□ -1.45
TOPBP1-202ENST00000503338 RAB5BP61020 215 aa6.01□□□□□ -1.45
TOPBP1-202ENST00000503338 TDRG1Q3Y452 100 aa6.01□□□□□ -1.45
TOPBP1-202ENST00000503338 DNLZQ5SXM8 178 aa6.01□□□□□ -1.45
TOPBP1-202ENST00000503338 MORN3Q6PF18 240 aaPredicted RBP6.01□□□□□ -1.45
TOPBP1-202ENST00000503338 TRPT1Q86TN4 253 aaKnown RBP6.01□□□□□ -1.45
TOPBP1-202ENST00000503338 TMEM256Q8N2U0 113 aa6.01□□□□□ -1.45
TOPBP1-202ENST00000503338 GTSF1Q8WW33 167 aa6.01□□□□□ -1.45
TOPBP1-202ENST00000503338 PGLYRP4Q96LB8 373 aa6.01□□□□□ -1.45
TOPBP1-202ENST00000503338 C1QTNF4Q9BXJ3 329 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms