RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 CST7O76096 145 aa4.13□□□□□ -1.75
LSM3P4-201ENST00000502948 SNRPCP09234 159 aaKnown RBP4.13□□□□□ -1.75
LSM3P4-201ENST00000502948 SRIP30626 198 aa4.13□□□□□ -1.75
LSM3P4-201ENST00000502948 RNASE4P34096 147 aaKnown RBP4.13□□□□□ -1.75
LSM3P4-201ENST00000502948 BCAP31P51572 246 aa4.13□□□□□ -1.75
LSM3P4-201ENST00000502948 BAXQ07812 192 aa4.13□□□□□ -1.75
LSM3P4-201ENST00000502948 ICAM4Q14773 271 aa4.13□□□□□ -1.75
LSM3P4-201ENST00000502948 Q5VSD8 79 aa4.13□□□□□ -1.75
LSM3P4-201ENST00000502948 EXOC3-AS1Q8N2X6 119 aa4.13□□□□□ -1.75
LSM3P4-201ENST00000502948 FXYD5Q96DB9 178 aa4.13□□□□□ -1.75
LSM3P4-201ENST00000502948 ARPC5LQ9BPX5 153 aa4.13□□□□□ -1.75
LSM3P4-201ENST00000502948 SLC25A2Q9BXI2 301 aa4.13□□□□□ -1.75
LSM3P4-201ENST00000502948 OR51M1Q9H341 326 aa4.13□□□□□ -1.75
LSM3P4-201ENST00000502948 MSRB1Q9NZV6 116 aa4.13□□□□□ -1.75
LSM3P4-201ENST00000502948 LSM5Q9Y4Y9 91 aaKnown RBP4.13□□□□□ -1.75
LSM3P4-201ENST00000502948 TRGV11A0A075B6L2 103 aa4.12□□□□□ -1.75
LSM3P4-201ENST00000502948 TRAV4A0A0B4J268 109 aa4.12□□□□□ -1.75
LSM3P4-201ENST00000502948 UBE2L5PA0A1B0GUS4 154 aa4.12□□□□□ -1.75
LSM3P4-201ENST00000502948 IGSF23A1L1A6 192 aa4.12□□□□□ -1.75
LSM3P4-201ENST00000502948 C5orf51A6NDU8 294 aa4.12□□□□□ -1.75
LSM3P4-201ENST00000502948 CCDC160A6NGH7 325 aa4.12□□□□□ -1.75
LSM3P4-201ENST00000502948 J3KRW8 73 aa4.12□□□□□ -1.75
LSM3P4-201ENST00000502948 PRAF2O60831 178 aa4.12□□□□□ -1.75
LSM3P4-201ENST00000502948 PYYP10082 97 aa4.12□□□□□ -1.75
LSM3P4-201ENST00000502948 FGF7P21781 194 aa4.12□□□□□ -1.75
LSM3P4-201ENST00000502948 GCSHP23434 173 aa4.12□□□□□ -1.75
LSM3P4-201ENST00000502948 CSN1S1P47710 185 aa4.12□□□□□ -1.75
LSM3P4-201ENST00000502948 KRTAP10-1P60331 282 aa4.12□□□□□ -1.75
LSM3P4-201ENST00000502948 ERCC8Q13216 396 aa4.12□□□□□ -1.75
LSM3P4-201ENST00000502948 RAB32Q13637 225 aa4.12□□□□□ -1.75
LSM3P4-201ENST00000502948 LINC01556Q5JQF7 62 aa4.12□□□□□ -1.75
LSM3P4-201ENST00000502948 PRR9Q5T870 116 aa4.12□□□□□ -1.75
LSM3P4-201ENST00000502948 PCNPQ8WW12 178 aaKnown RBP4.12□□□□□ -1.75
LSM3P4-201ENST00000502948 PTH2Q96A98 100 aa4.12□□□□□ -1.75
LSM3P4-201ENST00000502948 CCDC32Q9BV29 185 aa4.12□□□□□ -1.75
LSM3P4-201ENST00000502948 NMES1Q9C002 83 aa4.12□□□□□ -1.75
LSM3P4-201ENST00000502948 WDR61Q9GZS3 305 aaKnown RBP4.12□□□□□ -1.75
LSM3P4-201ENST00000502948 SLC25A31Q9H0C2 315 aa4.12□□□□□ -1.75
LSM3P4-201ENST00000502948 SH3BGRL3Q9H299 93 aa4.12□□□□□ -1.75
LSM3P4-201ENST00000502948 GPN1Q9HCN4 374 aaPredicted RBP4.12□□□□□ -1.75
LSM3P4-201ENST00000502948 DMBT1Q9UGM3 2413 aaPredicted RBP4.11□□□□□ -1.75
LSM3P4-201ENST00000502948 TRGV4A0A0C4DH28 118 aa4.11□□□□□ -1.75
LSM3P4-201ENST00000502948 LRCOL1A6NCL2 159 aa4.11□□□□□ -1.75
LSM3P4-201ENST00000502948 IBA57-AS1B1ANH7 110 aa4.11□□□□□ -1.75
LSM3P4-201ENST00000502948 DIRC3C9JPN6 131 aa4.11□□□□□ -1.75
LSM3P4-201ENST00000502948 E5RGE8 158 aa4.11□□□□□ -1.75
LSM3P4-201ENST00000502948 C17orf112F2Z3M2 114 aa4.11□□□□□ -1.75
LSM3P4-201ENST00000502948 FAM229AH3BQW9 127 aa4.11□□□□□ -1.75
LSM3P4-201ENST00000502948 CCSO14618 274 aa4.11□□□□□ -1.75
LSM3P4-201ENST00000502948 PRB4P10163 310 aaPredicted RBP4.11□□□□□ -1.75
LSM3P4-201ENST00000502948 CYCSP99999 105 aaKnown RBP4.11□□□□□ -1.75
LSM3P4-201ENST00000502948 LAGE3Q14657 143 aa4.11□□□□□ -1.75
LSM3P4-201ENST00000502948 FAM159AQ6UWV7 190 aa4.11□□□□□ -1.75
LSM3P4-201ENST00000502948 OR5C1Q8NGR4 320 aa4.11□□□□□ -1.75
LSM3P4-201ENST00000502948 BLNKQ8WV28 456 aa4.11□□□□□ -1.75
LSM3P4-201ENST00000502948 ZNF479Q96JC4 524 aa4.11□□□□□ -1.75
LSM3P4-201ENST00000502948 KCNS1Q96KK3 526 aa4.11□□□□□ -1.75
LSM3P4-201ENST00000502948 C8orf49Q96NF6 230 aa4.11□□□□□ -1.75
LSM3P4-201ENST00000502948 PAXXQ9BUH6 204 aa4.11□□□□□ -1.75
LSM3P4-201ENST00000502948 NUDT15Q9NV35 164 aa4.11□□□□□ -1.75
LSM3P4-201ENST00000502948 MRPL16Q9NX20 251 aaKnown RBP4.11□□□□□ -1.75
LSM3P4-201ENST00000502948 VPS13BQ7Z7G8 4022 aa4.11□□□□□ -1.75
LSM3P4-201ENST00000502948 IGKV2-40A0A087WW87 121 aaPredicted RBP4.1□□□□□ -1.75
LSM3P4-201ENST00000502948 IGHV3-38A0A0C4DH36 116 aa4.1□□□□□ -1.75
LSM3P4-201ENST00000502948 SERTM2A0A1B0GWG4 89 aa4.1□□□□□ -1.75
LSM3P4-201ENST00000502948 TRBV6-4A0A1B0GX49 114 aa4.1□□□□□ -1.75
LSM3P4-201ENST00000502948 FAM25EA8MYX2 175 aa4.1□□□□□ -1.75
LSM3P4-201ENST00000502948 M0R2P5 195 aa4.1□□□□□ -1.75
LSM3P4-201ENST00000502948 IGKV2D-40P01614 121 aaPredicted RBP4.1□□□□□ -1.75
LSM3P4-201ENST00000502948 CRYGDP07320 174 aa4.1□□□□□ -1.75
LSM3P4-201ENST00000502948 PFN1P07737 140 aaKnown RBP4.1□□□□□ -1.75
LSM3P4-201ENST00000502948 H2AFB2P0C5Z0 115 aa4.1□□□□□ -1.75
LSM3P4-201ENST00000502948 GYPEP15421 78 aa4.1□□□□□ -1.75
LSM3P4-201ENST00000502948 GATA1P15976 413 aaPredicted RBP4.1□□□□□ -1.75
LSM3P4-201ENST00000502948 TAS2R45P59539 299 aa4.1□□□□□ -1.75
LSM3P4-201ENST00000502948 NHLH2Q02577 135 aa4.1□□□□□ -1.75
LSM3P4-201ENST00000502948 KHDC3LQ587J8 217 aa4.1□□□□□ -1.75
LSM3P4-201ENST00000502948 GCSAMLQ5JQS6 135 aa4.1□□□□□ -1.75
LSM3P4-201ENST00000502948 FAM74A1Q5RGS3 127 aa4.1□□□□□ -1.75
LSM3P4-201ENST00000502948 PIK3CD-AS1Q5SR53 167 aa4.1□□□□□ -1.75
LSM3P4-201ENST00000502948 FAM122CQ6P4D5 195 aa4.1□□□□□ -1.75
LSM3P4-201ENST00000502948 MIR17HGQ75NE6 70 aa4.1□□□□□ -1.75
LSM3P4-201ENST00000502948 WFDC10BQ8IUB3 73 aa4.1□□□□□ -1.75
LSM3P4-201ENST00000502948 NDUFA13Q9P0J0 144 aa4.1□□□□□ -1.75
LSM3P4-201ENST00000502948 MDFICQ9P1T7 246 aa4.1□□□□□ -1.75
LSM3P4-201ENST00000502948 TNFRSF18Q9Y5U5 241 aa4.1□□□□□ -1.75
LSM3P4-201ENST00000502948 DNAH8Q96JB1 4490 aa4.09□□□□□ -1.75
LSM3P4-201ENST00000502948 MYCBP2O75592 4640 aa4.09□□□□□ -1.75
LSM3P4-201ENST00000502948 TRAV6A0A075B6T7 132 aa4.09□□□□□ -1.75
LSM3P4-201ENST00000502948 TRAV21A0A0B4J279 112 aa4.09□□□□□ -1.75
LSM3P4-201ENST00000502948 IGHV3-16A0A0C4DH30 117 aa4.09□□□□□ -1.75
LSM3P4-201ENST00000502948 FBLL1A6NHQ2 334 aaKnown RBP4.09□□□□□ -1.75
LSM3P4-201ENST00000502948 IGHV3-53P01767 116 aa4.09□□□□□ -1.75
LSM3P4-201ENST00000502948 S100A10P60903 97 aa4.09□□□□□ -1.75
LSM3P4-201ENST00000502948 RANP62826 216 aaKnown RBP4.09□□□□□ -1.75
LSM3P4-201ENST00000502948 ASAH1Q13510 395 aa4.09□□□□□ -1.75
LSM3P4-201ENST00000502948 PQLC2Q6ZP29 291 aa4.09□□□□□ -1.75
LSM3P4-201ENST00000502948 Q6ZQT7 251 aa4.09□□□□□ -1.75
LSM3P4-201ENST00000502948 Q6ZSA8 131 aa4.09□□□□□ -1.75
LSM3P4-201ENST00000502948 Q6ZSN1 163 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms