RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 TMEM138Q9NPI0 162 aa2.53□□□□□ -2
HMGB1P3-201ENST00000502802 COA4Q9NYJ1 87 aa2.53□□□□□ -2
HMGB1P3-201ENST00000502802 MED11Q9P086 117 aa2.53□□□□□ -2
HMGB1P3-201ENST00000502802 TMEM56-RWDD3S4R434 201 aa2.53□□□□□ -2
HMGB1P3-201ENST00000502802 ANK2Q01484 3957 aa2.53□□□□□ -2
HMGB1P3-201ENST00000502802 DOCK11Q5JSL3 2073 aa2.53□□□□□ -2.01
HMGB1P3-201ENST00000502802 IGLV3-32A0A0A0MS00 114 aa2.52□□□□□ -2.01
HMGB1P3-201ENST00000502802 MUC21A0A0G2JKD1 596 aa2.52□□□□□ -2.01
HMGB1P3-201ENST00000502802 MUC21A0A140T8X8 626 aa2.52□□□□□ -2.01
HMGB1P3-201ENST00000502802 EXOC1LA0A1B0GW35 172 aa2.52□□□□□ -2.01
HMGB1P3-201ENST00000502802 ARPC5O15511 151 aa2.52□□□□□ -2.01
HMGB1P3-201ENST00000502802 FAM107AO95990 144 aa2.52□□□□□ -2.01
HMGB1P3-201ENST00000502802 BPGMP07738 259 aa2.52□□□□□ -2.01
HMGB1P3-201ENST00000502802 CST2P09228 141 aa2.52□□□□□ -2.01
HMGB1P3-201ENST00000502802 OR10J4P0C629 311 aa2.52□□□□□ -2.01
HMGB1P3-201ENST00000502802 TSPAN19P0C672 248 aa2.52□□□□□ -2.01
HMGB1P3-201ENST00000502802 CRYGSP22914 178 aa2.52□□□□□ -2.01
HMGB1P3-201ENST00000502802 S100A7P31151 101 aa2.52□□□□□ -2.01
HMGB1P3-201ENST00000502802 CSN1S1P47710 185 aa2.52□□□□□ -2.01
HMGB1P3-201ENST00000502802 RNASE10Q5GAN6 216 aaKnown RBP2.52□□□□□ -2.01
HMGB1P3-201ENST00000502802 GRINAQ7Z429 371 aa2.52□□□□□ -2.01
HMGB1P3-201ENST00000502802 OR4X1Q8NH49 305 aa2.52□□□□□ -2.01
HMGB1P3-201ENST00000502802 BTF3L4Q96K17 158 aa2.52□□□□□ -2.01
HMGB1P3-201ENST00000502802 RNF122Q9H9V4 155 aa2.52□□□□□ -2.01
HMGB1P3-201ENST00000502802 GSKIPQ9P0R6 139 aa2.52□□□□□ -2.01
HMGB1P3-201ENST00000502802 RSL24D1Q9UHA3 163 aaKnown RBP2.52□□□□□ -2.01
HMGB1P3-201ENST00000502802 ARHGAP32A7KAX9 2087 aa2.52□□□□□ -2.01
HMGB1P3-201ENST00000502802 TRBV20OR9-2A0A075B6H5 130 aa2.51□□□□□ -2.01
HMGB1P3-201ENST00000502802 A0A0J9YW62 118 aa2.51□□□□□ -2.01
HMGB1P3-201ENST00000502802 C9orf170A2RU37 121 aa2.51□□□□□ -2.01
HMGB1P3-201ENST00000502802 DLEU1O43261 78 aa2.51□□□□□ -2.01
HMGB1P3-201ENST00000502802 CNIH1O95406 144 aa2.51□□□□□ -2.01
HMGB1P3-201ENST00000502802 HAND1O96004 215 aa2.51□□□□□ -2.01
HMGB1P3-201ENST00000502802 IFI6P09912 130 aa2.51□□□□□ -2.01
HMGB1P3-201ENST00000502802 CRYBA4P53673 196 aa2.51□□□□□ -2.01
HMGB1P3-201ENST00000502802 TCTAP57738 103 aa2.51□□□□□ -2.01
HMGB1P3-201ENST00000502802 MEF2BQ02080 365 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P3-201ENST00000502802 KCNJ8Q15842 424 aa2.51□□□□□ -2.01
HMGB1P3-201ENST00000502802 ANKRD29Q8N6D5 301 aa2.51□□□□□ -2.01
HMGB1P3-201ENST00000502802 ZNF283Q8N7M2 679 aa2.51□□□□□ -2.01
HMGB1P3-201ENST00000502802 OR13D1Q8NGV5 346 aa2.51□□□□□ -2.01
HMGB1P3-201ENST00000502802 BORCS7Q96B45 105 aa2.51□□□□□ -2.01
HMGB1P3-201ENST00000502802 ERMAPQ96PL5 475 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P3-201ENST00000502802 CCL19Q99731 98 aa2.51□□□□□ -2.01
HMGB1P3-201ENST00000502802 CMSS1Q9BQ75 279 aaKnown RBP2.51□□□□□ -2.01
HMGB1P3-201ENST00000502802 WDR61Q9GZS3 305 aaKnown RBP2.51□□□□□ -2.01
HMGB1P3-201ENST00000502802 DOK5Q9P104 306 aa2.51□□□□□ -2.01
HMGB1P3-201ENST00000502802 PLXNB1O43157 2135 aa2.5□□□□□ -2.01
HMGB1P3-201ENST00000502802 A0A1B0GV90 55 aa2.5□□□□□ -2.01
HMGB1P3-201ENST00000502802 A0A1B0GVG6 124 aa2.5□□□□□ -2.01
HMGB1P3-201ENST00000502802 PRORSD1PA6NEY8 169 aa2.5□□□□□ -2.01
HMGB1P3-201ENST00000502802 OR4C46A6NHA9 309 aa2.5□□□□□ -2.01
HMGB1P3-201ENST00000502802 FAAHO00519 579 aa2.5□□□□□ -2.01
HMGB1P3-201ENST00000502802 GGCTO75223 188 aaKnown RBP2.5□□□□□ -2.01
HMGB1P3-201ENST00000502802 IFNA1P01562 189 aa2.5□□□□□ -2.01
HMGB1P3-201ENST00000502802 SHBGP04278 402 aa2.5□□□□□ -2.01
HMGB1P3-201ENST00000502802 METTL15P1P0C7V9 234 aa2.5□□□□□ -2.01
HMGB1P3-201ENST00000502802 LINC00032P0C843 101 aa2.5□□□□□ -2.01
HMGB1P3-201ENST00000502802 SPI1P17947 270 aa2.5□□□□□ -2.01
HMGB1P3-201ENST00000502802 S100GP29377 79 aa2.5□□□□□ -2.01
HMGB1P3-201ENST00000502802 DNAJB13P59910 316 aa2.5□□□□□ -2.01
HMGB1P3-201ENST00000502802 HIST1H3AP68431 136 aa2.5□□□□□ -2.01
HMGB1P3-201ENST00000502802 H3F3AP84243 136 aa2.5□□□□□ -2.01
HMGB1P3-201ENST00000502802 EMX2Q04743 252 aa2.5□□□□□ -2.01
HMGB1P3-201ENST00000502802 CDK10Q15131 360 aa2.5□□□□□ -2.01
HMGB1P3-201ENST00000502802 TOMM20LQ6UXN7 152 aa2.5□□□□□ -2.01
HMGB1P3-201ENST00000502802 SLC35E3Q7Z769 313 aa2.5□□□□□ -2.01
HMGB1P3-201ENST00000502802 OR6V1Q8N148 313 aa2.5□□□□□ -2.01
HMGB1P3-201ENST00000502802 OR8J3Q8NGG0 315 aa2.5□□□□□ -2.01
HMGB1P3-201ENST00000502802 MRPL30Q8TCC3 161 aaKnown RBP2.5□□□□□ -2.01
HMGB1P3-201ENST00000502802 DNAJC9Q8WXX5 260 aa2.5□□□□□ -2.01
HMGB1P3-201ENST00000502802 MRPS24Q96EL2 167 aaKnown RBP2.5□□□□□ -2.01
HMGB1P3-201ENST00000502802 GGACTQ9BVM4 153 aa2.5□□□□□ -2.01
HMGB1P3-201ENST00000502802 COMMD5Q9GZQ3 224 aa2.5□□□□□ -2.01
HMGB1P3-201ENST00000502802 MIXL1Q9H2W2 232 aa2.5□□□□□ -2.01
HMGB1P3-201ENST00000502802 EFCAB1Q9HAE3 211 aa2.5□□□□□ -2.01
HMGB1P3-201ENST00000502802 LRTM1Q9HBL6 345 aa2.5□□□□□ -2.01
HMGB1P3-201ENST00000502802 FUT9Q9Y231 359 aa2.5□□□□□ -2.01
HMGB1P3-201ENST00000502802 RBM7Q9Y580 266 aaKnown RBP2.5□□□□□ -2.01
HMGB1P3-201ENST00000502802 DNAJC15Q9Y5T4 150 aa2.5□□□□□ -2.01
HMGB1P3-201ENST00000502802 TGP01266 2768 aa2.49□□□□□ -2.01
HMGB1P3-201ENST00000502802 DPRXA6NFQ7 191 aa2.49□□□□□ -2.01
HMGB1P3-201ENST00000502802 FNDC10F2Z333 226 aa2.49□□□□□ -2.01
HMGB1P3-201ENST00000502802 H3BQF6 201 aa2.49□□□□□ -2.01
HMGB1P3-201ENST00000502802 LEPROTO15243 131 aa2.49□□□□□ -2.01
HMGB1P3-201ENST00000502802 HMGN2P05204 90 aaKnown RBP2.49□□□□□ -2.01
HMGB1P3-201ENST00000502802 RPL38P63173 70 aaKnown RBP2.49□□□□□ -2.01
HMGB1P3-201ENST00000502802 MRPS10P82664 201 aaKnown RBP2.49□□□□□ -2.01
HMGB1P3-201ENST00000502802 RUNX1Q01196 453 aa2.49□□□□□ -2.01
HMGB1P3-201ENST00000502802 ZNF181Q2M3W8 571 aa2.49□□□□□ -2.01
HMGB1P3-201ENST00000502802 SMIM21Q3B7S5 101 aa2.49□□□□□ -2.01
HMGB1P3-201ENST00000502802 LIN52Q52LA3 116 aa2.49□□□□□ -2.01
HMGB1P3-201ENST00000502802 PABPC1L2AQ5JQF8 200 aa2.49□□□□□ -2.01
HMGB1P3-201ENST00000502802 NCMAPQ5T1S8 102 aa2.49□□□□□ -2.01
HMGB1P3-201ENST00000502802 C4orf33Q8N1A6 199 aa2.49□□□□□ -2.01
HMGB1P3-201ENST00000502802 LRRC18Q8N456 261 aa2.49□□□□□ -2.01
HMGB1P3-201ENST00000502802 OR8B12Q8NGG6 310 aa2.49□□□□□ -2.01
HMGB1P3-201ENST00000502802 OR5J2Q8NH18 312 aa2.49□□□□□ -2.01
HMGB1P3-201ENST00000502802 DNAJC30Q96LL9 226 aa2.49□□□□□ -2.01
HMGB1P3-201ENST00000502802 TSPAN32Q96QS1 320 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms