RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 C7orf71A4D174 169 aa12.36□□□□□ -0.43
SEMA4D-220ENST00000492386 TMEM78Q5T7P6 136 aa12.36□□□□□ -0.43
SEMA4D-220ENST00000492386 TRGV3P03979 118 aa12.35□□□□□ -0.43
SEMA4D-220ENST00000492386 C9orf47Q6ZRZ4 202 aa12.35□□□□□ -0.43
SEMA4D-220ENST00000492386 OR9G4Q8NGQ1 327 aa12.35□□□□□ -0.43
SEMA4D-220ENST00000492386 IGHV7-4-1A0A0J9YVY3 117 aa12.35□□□□□ -0.43
SEMA4D-220ENST00000492386 SIVA1O15304 175 aa12.35□□□□□ -0.43
SEMA4D-220ENST00000492386 ADAMTSL5Q6ZMM2 481 aa12.35□□□□□ -0.43
SEMA4D-220ENST00000492386 PCP2Q8IVA1 136 aa12.35□□□□□ -0.43
SEMA4D-220ENST00000492386 HIF1ANQ9NWT6 349 aa12.35□□□□□ -0.43
SEMA4D-220ENST00000492386 PEF1Q9UBV8 284 aaKnown RBP12.35□□□□□ -0.43
SEMA4D-220ENST00000492386 IGLV2-18A0A075B6J9 118 aa12.34□□□□□ -0.43
SEMA4D-220ENST00000492386 A1L4Q6 167 aa12.34□□□□□ -0.43
SEMA4D-220ENST00000492386 ATP5G2Q06055 141 aa12.34□□□□□ -0.43
SEMA4D-220ENST00000492386 C19orf54Q5BKX5 351 aa12.34□□□□□ -0.43
SEMA4D-220ENST00000492386 Q6ZQT7 251 aa12.34□□□□□ -0.43
SEMA4D-220ENST00000492386 TMEM219Q86XT9 240 aa12.34□□□□□ -0.43
SEMA4D-220ENST00000492386 ZMAT4Q9H898 229 aa12.34□□□□□ -0.43
SEMA4D-220ENST00000492386 UQCRFS1P47985 274 aa12.34□□□□□ -0.43
SEMA4D-220ENST00000492386 ODF1Q14990 250 aa12.34□□□□□ -0.43
SEMA4D-220ENST00000492386 Q8N8P6 123 aa12.34□□□□□ -0.43
SEMA4D-220ENST00000492386 PIFOQ8TCI5 191 aa12.33□□□□□ -0.44
SEMA4D-220ENST00000492386 AKAP6Q13023 2319 aa12.33□□□□□ -0.44
SEMA4D-220ENST00000492386 ABCA2Q9BZC7 2435 aa12.33□□□□□ -0.44
SEMA4D-220ENST00000492386 NMUP48645 174 aa12.33□□□□□ -0.44
SEMA4D-220ENST00000492386 HSD52Q0P140 79 aa12.33□□□□□ -0.44
SEMA4D-220ENST00000492386 OR2K2Q8NGT1 345 aa12.33□□□□□ -0.44
SEMA4D-220ENST00000492386 HHLA3Q9XRX5 114 aa12.33□□□□□ -0.44
SEMA4D-220ENST00000492386 TRAV41A0A0B4J266 112 aa12.32□□□□□ -0.44
SEMA4D-220ENST00000492386 NRACQ8N912 160 aa12.32□□□□□ -0.44
SEMA4D-220ENST00000492386 OR4X2Q8NGF9 303 aa12.32□□□□□ -0.44
SEMA4D-220ENST00000492386 TMEM158Q8WZ71 300 aa12.32□□□□□ -0.44
SEMA4D-220ENST00000492386 IGHV4-4A0A075B6R2 117 aa12.32□□□□□ -0.44
SEMA4D-220ENST00000492386 GLMPQ8WWB7 406 aa12.32□□□□□ -0.44
SEMA4D-220ENST00000492386 ATP6V0BQ99437 205 aa12.32□□□□□ -0.44
SEMA4D-220ENST00000492386 LINC00527Q9UJ94 153 aa12.32□□□□□ -0.44
SEMA4D-220ENST00000492386 MOB4Q9Y3A3 225 aa12.32□□□□□ -0.44
SEMA4D-220ENST00000492386 PRR9Q5T870 116 aa12.31□□□□□ -0.44
SEMA4D-220ENST00000492386 C20orf173Q96LM9 149 aa12.31□□□□□ -0.44
SEMA4D-220ENST00000492386 IGHV3OR16-10A0A075B7F0 116 aa12.3□□□□□ -0.44
SEMA4D-220ENST00000492386 A6NDN8 102 aa12.3□□□□□ -0.44
SEMA4D-220ENST00000492386 FAM223BA6NKX1 122 aa12.3□□□□□ -0.44
SEMA4D-220ENST00000492386 PRSS47A8MTI9 375 aa12.3□□□□□ -0.44
SEMA4D-220ENST00000492386 H3BRM9 83 aa12.3□□□□□ -0.44
SEMA4D-220ENST00000492386 FAM223AQ8IWN6 122 aa12.3□□□□□ -0.44
SEMA4D-220ENST00000492386 ITLN2Q8WWU7 325 aaPredicted RBP12.3□□□□□ -0.44
SEMA4D-220ENST00000492386 C16orf92Q96LL3 132 aa12.3□□□□□ -0.44
SEMA4D-220ENST00000492386 IGKV2D-26A0A0A0MRZ7 120 aa12.3□□□□□ -0.44
SEMA4D-220ENST00000492386 TRAV26-2A0A0B4J265 109 aa12.3□□□□□ -0.44
SEMA4D-220ENST00000492386 CDKN1BP46527 198 aa12.3□□□□□ -0.44
SEMA4D-220ENST00000492386 CRIP2P52943 208 aaPredicted RBP12.3□□□□□ -0.44
SEMA4D-220ENST00000492386 LY6DQ14210 128 aa12.3□□□□□ -0.44
SEMA4D-220ENST00000492386 COL25A1Q9BXS0 654 aaPredicted RBP12.3□□□□□ -0.44
SEMA4D-220ENST00000492386 C19orf84I3L1E1 186 aa12.29□□□□□ -0.44
SEMA4D-220ENST00000492386 PRSS1P07477 247 aa12.29□□□□□ -0.44
SEMA4D-220ENST00000492386 CST9LQ9H4G1 147 aa12.29□□□□□ -0.44
SEMA4D-220ENST00000492386 C9orf118A6NHY6 69 aa12.29□□□□□ -0.44
SEMA4D-220ENST00000492386 SMIM15Q7Z3B0 74 aa12.29□□□□□ -0.44
SEMA4D-220ENST00000492386 FOXC2Q99958 501 aa12.29□□□□□ -0.44
SEMA4D-220ENST00000492386 UFC1Q9Y3C8 167 aa12.29□□□□□ -0.44
SEMA4D-220ENST00000492386 IGF1P05019 195 aa12.28□□□□□ -0.44
SEMA4D-220ENST00000492386 SMIM17P0DL12 118 aa12.28□□□□□ -0.44
SEMA4D-220ENST00000492386 ARL3P36405 182 aa12.28□□□□□ -0.44
SEMA4D-220ENST00000492386 KIR3DS1Q14943 382 aa12.28□□□□□ -0.44
SEMA4D-220ENST00000492386 C9orf139Q6ZV77 190 aa12.28□□□□□ -0.44
SEMA4D-220ENST00000492386 GPHB5Q86YW7 130 aa12.28□□□□□ -0.44
SEMA4D-220ENST00000492386 JMJD8Q96S16 334 aa12.28□□□□□ -0.44
SEMA4D-220ENST00000492386 TRBV12-3P01733 135 aa12.28□□□□□ -0.44
SEMA4D-220ENST00000492386 IGHV4-39P01824 125 aa12.28□□□□□ -0.44
SEMA4D-220ENST00000492386 IGKCP01834 107 aa12.28□□□□□ -0.44
SEMA4D-220ENST00000492386 PSMG4Q5JS54 123 aa12.28□□□□□ -0.44
SEMA4D-220ENST00000492386 UNQ9165/PRO28630Q6UXU0 137 aa12.28□□□□□ -0.44
SEMA4D-220ENST00000492386 SPTBN4Q9H254 2564 aa12.28□□□□□ -0.44
SEMA4D-220ENST00000492386 IGHV1-69DA0A0B4J2H0 117 aa12.27□□□□□ -0.44
SEMA4D-220ENST00000492386 H3BVH4 76 aa12.27□□□□□ -0.44
SEMA4D-220ENST00000492386 IGHV1-69P01742 117 aa12.27□□□□□ -0.44
SEMA4D-220ENST00000492386 PCP4P48539 62 aa12.27□□□□□ -0.44
SEMA4D-220ENST00000492386 SPANXN1Q5VSR9 72 aa12.27□□□□□ -0.44
SEMA4D-220ENST00000492386 LENEPQ9Y5L5 61 aa12.27□□□□□ -0.44
SEMA4D-220ENST00000492386 GAGE12BA1L429 117 aa12.27□□□□□ -0.45
SEMA4D-220ENST00000492386 ATP5LO75964 103 aa12.27□□□□□ -0.45
SEMA4D-220ENST00000492386 LAGE3Q14657 143 aa12.27□□□□□ -0.45
SEMA4D-220ENST00000492386 UFSP1Q6NVU6 142 aa12.27□□□□□ -0.45
SEMA4D-220ENST00000492386 BRD3OSQ6XYD6 125 aa12.27□□□□□ -0.45
SEMA4D-220ENST00000492386 SMPXQ9UHP9 88 aa12.27□□□□□ -0.45
SEMA4D-220ENST00000492386 TTTY13Q9BZ97 58 aa12.26□□□□□ -0.45
SEMA4D-220ENST00000492386 SOCS3O14543 225 aa12.26□□□□□ -0.45
SEMA4D-220ENST00000492386 DPM2O94777 84 aa12.26□□□□□ -0.45
SEMA4D-220ENST00000492386 OCIAD2Q56VL3 154 aa12.26□□□□□ -0.45
SEMA4D-220ENST00000492386 ZFAND2AQ8N6M9 145 aa12.26□□□□□ -0.45
SEMA4D-220ENST00000492386 TMEM8BA6NDV4 472 aa12.25□□□□□ -0.45
SEMA4D-220ENST00000492386 GAGE10A6NGK3 116 aa12.25□□□□□ -0.45
SEMA4D-220ENST00000492386 H3BUT2 72 aa12.25□□□□□ -0.45
SEMA4D-220ENST00000492386 HIGD1BQ9P298 99 aa12.25□□□□□ -0.45
SEMA4D-220ENST00000492386 ZFHX3Q15911 3703 aa12.25□□□□□ -0.45
SEMA4D-220ENST00000492386 NDUFA4O00483 81 aa12.25□□□□□ -0.45
SEMA4D-220ENST00000492386 C21orf62-AS1Q17RA5 79 aa12.25□□□□□ -0.45
SEMA4D-220ENST00000492386 GTSCR1Q86UQ5 136 aa12.25□□□□□ -0.45
SEMA4D-220ENST00000492386 LINC00477Q96M19 166 aa12.25□□□□□ -0.45
SEMA4D-220ENST00000492386 NCOR2Q9Y618 2525 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms