RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 BORCS7-ASMTA0A0B4J1R7 106 aa17.29■□□□□ 0.36
UPF3A-209ENST00000492270 ARPC5O15511 151 aa17.29■□□□□ 0.36
UPF3A-209ENST00000492270 MBP02144 154 aa17.29■□□□□ 0.36
UPF3A-209ENST00000492270 GCHFRP30047 84 aa17.29■□□□□ 0.36
UPF3A-209ENST00000492270 KLF12Q9Y4X4 402 aa17.29■□□□□ 0.36
UPF3A-209ENST00000492270 NUDT3O95989 172 aa17.28■□□□□ 0.36
UPF3A-209ENST00000492270 HOXA5P20719 270 aa17.28■□□□□ 0.36
UPF3A-209ENST00000492270 GNPNAT1Q96EK6 184 aaPredicted RBP17.28■□□□□ 0.36
UPF3A-209ENST00000492270 TMPRSS5Q9H3S3 457 aa17.28■□□□□ 0.36
UPF3A-209ENST00000492270 TRAV8-1A0A0A6YYK1 113 aa17.27■□□□□ 0.36
UPF3A-209ENST00000492270 M0R2N4 97 aa17.27■□□□□ 0.36
UPF3A-209ENST00000492270 TCL1AP56279 114 aa17.27■□□□□ 0.36
UPF3A-209ENST00000492270 OR5I1Q13606 314 aa17.27■□□□□ 0.36
UPF3A-209ENST00000492270 MUC21Q5SSG8 566 aa17.27■□□□□ 0.36
UPF3A-209ENST00000492270 SUN5Q8TC36 379 aa17.27■□□□□ 0.36
UPF3A-209ENST00000492270 ACTR3CQ9C0K3 210 aaPredicted RBP17.27■□□□□ 0.36
UPF3A-209ENST00000492270 IGLV2-18A0A075B6J9 118 aa17.26■□□□□ 0.35
UPF3A-209ENST00000492270 RNF212Q495C1 297 aa17.26■□□□□ 0.35
UPF3A-209ENST00000492270 TMED6Q8WW62 240 aa17.26■□□□□ 0.35
UPF3A-209ENST00000492270 LENEPQ9Y5L5 61 aa17.26■□□□□ 0.35
UPF3A-209ENST00000492270 TRGV1A0A0A0MS02 117 aa17.25■□□□□ 0.35
UPF3A-209ENST00000492270 ZNF726P1Q15940 193 aa17.25■□□□□ 0.35
UPF3A-209ENST00000492270 IBA57Q5T440 356 aaKnown RBP17.25■□□□□ 0.35
UPF3A-209ENST00000492270 Q6AWC8 147 aa17.25■□□□□ 0.35
UPF3A-209ENST00000492270 TVP23CQ96ET8 276 aa17.25■□□□□ 0.35
UPF3A-209ENST00000492270 ST6GAL2Q96JF0 529 aa17.25■□□□□ 0.35
UPF3A-209ENST00000492270 ARPC5LQ9BPX5 153 aa17.25■□□□□ 0.35
UPF3A-209ENST00000492270 MUC4Q99102 2169 aa17.25■□□□□ 0.35
UPF3A-209ENST00000492270 TRAV26-1A0A087WT03 109 aa17.24■□□□□ 0.35
UPF3A-209ENST00000492270 SPINK4O60575 86 aa17.24■□□□□ 0.35
UPF3A-209ENST00000492270 CXorf1O96002 111 aa17.24■□□□□ 0.35
UPF3A-209ENST00000492270 ARL6IP6Q8N6S5 226 aa17.24■□□□□ 0.35
UPF3A-209ENST00000492270 SGK494Q96LW2 274 aa17.24■□□□□ 0.35
UPF3A-209ENST00000492270 CYTL1Q9NRR1 136 aa17.24■□□□□ 0.35
UPF3A-209ENST00000492270 A0A0J9YY99 117 aa17.23■□□□□ 0.35
UPF3A-209ENST00000492270 F6UZH7 168 aa17.23■□□□□ 0.35
UPF3A-209ENST00000492270 MRPL16Q9NX20 251 aaKnown RBP17.23■□□□□ 0.35
UPF3A-209ENST00000492270 TRGV2A0A075B6R0 118 aa17.22■□□□□ 0.35
UPF3A-209ENST00000492270 GGTLC3B5MD39 225 aa17.22■□□□□ 0.35
UPF3A-209ENST00000492270 IQCF2Q8IXL9 164 aa17.22■□□□□ 0.35
UPF3A-209ENST00000492270 ATG101Q9BSB4 218 aa17.22■□□□□ 0.35
UPF3A-209ENST00000492270 TAAR5O14804 337 aa17.21■□□□□ 0.35
UPF3A-209ENST00000492270 C5orf17Q8NAS9 161 aa17.21■□□□□ 0.35
UPF3A-209ENST00000492270 TMEM167BQ9NRX6 74 aa17.21■□□□□ 0.35
UPF3A-209ENST00000492270 MDFICQ9P1T7 246 aa17.21■□□□□ 0.35
UPF3A-209ENST00000492270 DNAH2Q9P225 4427 aa17.21■□□□□ 0.35
UPF3A-209ENST00000492270 HECTD4Q9Y4D8 3996 aa17.2■□□□□ 0.34
UPF3A-209ENST00000492270 CTXND1A0A1B0GTU2 59 aa17.2■□□□□ 0.34
UPF3A-209ENST00000492270 TCRAP04437 139 aa17.2■□□□□ 0.34
UPF3A-209ENST00000492270 SUMO1P63165 101 aaKnown RBP17.2■□□□□ 0.34
UPF3A-209ENST00000492270 ZNF415Q09FC8 603 aa17.2■□□□□ 0.34
UPF3A-209ENST00000492270 C18orf15Q96N68 181 aa17.2■□□□□ 0.34
UPF3A-209ENST00000492270 TREM1Q9NP99 234 aa17.2■□□□□ 0.34
UPF3A-209ENST00000492270 NAGKQ9UJ70 344 aa17.2■□□□□ 0.34
UPF3A-209ENST00000492270 TMEM183BQ1AE95 376 aa17.19■□□□□ 0.34
UPF3A-209ENST00000492270 LGALS9BQ3B8N2 356 aa17.19■□□□□ 0.34
UPF3A-209ENST00000492270 AKR1C8PQ5T2L2 129 aa17.19■□□□□ 0.34
UPF3A-209ENST00000492270 TMEM183AQ8IXX5 376 aa17.19■□□□□ 0.34
UPF3A-209ENST00000492270 OR11H4Q8NGC9 324 aa17.19■□□□□ 0.34
UPF3A-209ENST00000492270 FGF8P55075 233 aaPredicted RBP17.18■□□□□ 0.34
UPF3A-209ENST00000492270 FAM159AQ6UWV7 190 aa17.18■□□□□ 0.34
UPF3A-209ENST00000492270 Q6ZR54 194 aa17.18■□□□□ 0.34
UPF3A-209ENST00000492270 LINC00588Q9Y4M8 146 aa17.18■□□□□ 0.34
UPF3A-209ENST00000492270 IGHV3-53P01767 116 aa17.17■□□□□ 0.34
UPF3A-209ENST00000492270 KCNRGQ8N5I3 272 aa17.17■□□□□ 0.34
UPF3A-209ENST00000492270 C8orf49Q96NF6 230 aa17.17■□□□□ 0.34
UPF3A-209ENST00000492270 SERTM2A0A1B0GWG4 89 aa17.16■□□□□ 0.34
UPF3A-209ENST00000492270 IGLV2-11P01706 119 aa17.16■□□□□ 0.34
UPF3A-209ENST00000492270 ZNF345Q14585 488 aa17.16■□□□□ 0.34
UPF3A-209ENST00000492270 VSIG2Q96IQ7 327 aa17.16■□□□□ 0.34
UPF3A-209ENST00000492270 EPDR1Q9UM22 224 aa17.16■□□□□ 0.34
UPF3A-209ENST00000492270 TRGV11A0A075B6L2 103 aa17.15■□□□□ 0.34
UPF3A-209ENST00000492270 TRAV21A0A0B4J279 112 aa17.15■□□□□ 0.34
UPF3A-209ENST00000492270 RTL8CO15255 209 aa17.15■□□□□ 0.34
UPF3A-209ENST00000492270 FAM3BP58499 235 aaPredicted RBP17.15■□□□□ 0.34
UPF3A-209ENST00000492270 UBE2G2P60604 165 aa17.15■□□□□ 0.34
UPF3A-209ENST00000492270 ZNRF2Q8NHG8 242 aa17.15■□□□□ 0.34
UPF3A-209ENST00000492270 PSG8Q9UQ74 426 aa17.15■□□□□ 0.34
UPF3A-209ENST00000492270 DNAH17Q9UFH2 4485 aa17.15■□□□□ 0.34
UPF3A-209ENST00000492270 FAT2Q9NYQ8 4349 aa17.14■□□□□ 0.33
UPF3A-209ENST00000492270 A0A1W2PRE2 83 aa17.14■□□□□ 0.33
UPF3A-209ENST00000492270 GNRH2O43555 120 aa17.14■□□□□ 0.33
UPF3A-209ENST00000492270 ZNF80P51504 273 aaPredicted RBP17.14■□□□□ 0.33
UPF3A-209ENST00000492270 CCL18P55774 89 aa17.14■□□□□ 0.33
UPF3A-209ENST00000492270 TDRG1Q3Y452 100 aa17.14■□□□□ 0.33
UPF3A-209ENST00000492270 CYB561D1Q8N8Q1 229 aa17.14■□□□□ 0.33
UPF3A-209ENST00000492270 NDFIP1Q9BT67 221 aa17.14■□□□□ 0.33
UPF3A-209ENST00000492270 H3BNG1 76 aa17.13■□□□□ 0.33
UPF3A-209ENST00000492270 K7EQM0 130 aa17.13■□□□□ 0.33
UPF3A-209ENST00000492270 FLI1Q01543 452 aaPredicted RBP17.13■□□□□ 0.33
UPF3A-209ENST00000492270 PRNTQ86SH4 94 aa17.13■□□□□ 0.33
UPF3A-209ENST00000492270 MAP1LC3B2A6NCE7 125 aa17.12■□□□□ 0.33
UPF3A-209ENST00000492270 HMSDA8MTL9 139 aa17.12■□□□□ 0.33
UPF3A-209ENST00000492270 TYMSP04818 313 aa17.12■□□□□ 0.33
UPF3A-209ENST00000492270 FHITP49789 147 aa17.12■□□□□ 0.33
UPF3A-209ENST00000492270 TMEM75Q8N9X5 138 aa17.12■□□□□ 0.33
UPF3A-209ENST00000492270 LINC00479Q96M42 142 aa17.12■□□□□ 0.33
UPF3A-209ENST00000492270 MAP1LC3BQ9GZQ8 125 aa17.12■□□□□ 0.33
UPF3A-209ENST00000492270 IGHV3-16A0A0C4DH30 117 aa17.11■□□□□ 0.33
UPF3A-209ENST00000492270 C11orf21Q9P2W6 132 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms