RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 BIRC6Q9NR09 4857 aa11.61□□□□□ -0.55
PDLIM2-217ENST00000491330 NBDYA0A0U1RRE5 68 aa11.6□□□□□ -0.55
PDLIM2-217ENST00000491330 ZNF324O75467 553 aaPredicted RBP11.6□□□□□ -0.55
PDLIM2-217ENST00000491330 CD300CQ08708 224 aa11.6□□□□□ -0.55
PDLIM2-217ENST00000491330 ZNF345Q14585 488 aa11.6□□□□□ -0.55
PDLIM2-217ENST00000491330 FAM159AQ6UWV7 190 aa11.6□□□□□ -0.55
PDLIM2-217ENST00000491330 VGLL1Q99990 258 aa11.6□□□□□ -0.55
PDLIM2-217ENST00000491330 ACTR3CQ9C0K3 210 aaPredicted RBP11.6□□□□□ -0.55
PDLIM2-217ENST00000491330 TMEM167BQ9NRX6 74 aa11.6□□□□□ -0.55
PDLIM2-217ENST00000491330 FBLL1A6NHQ2 334 aaKnown RBP11.59□□□□□ -0.55
PDLIM2-217ENST00000491330 K7EQM0 130 aa11.59□□□□□ -0.55
PDLIM2-217ENST00000491330 RTL8CO15255 209 aa11.59□□□□□ -0.55
PDLIM2-217ENST00000491330 TCL1AP56279 114 aa11.59□□□□□ -0.55
PDLIM2-217ENST00000491330 RAB2AP61019 212 aa11.59□□□□□ -0.55
PDLIM2-217ENST00000491330 Q5BKY6 102 aa11.59□□□□□ -0.55
PDLIM2-217ENST00000491330 Q6ZTI0 123 aa11.59□□□□□ -0.55
PDLIM2-217ENST00000491330 SUN5Q8TC36 379 aa11.59□□□□□ -0.55
PDLIM2-217ENST00000491330 HYLS1Q96M11 299 aa11.59□□□□□ -0.55
PDLIM2-217ENST00000491330 C18orf15Q96N68 181 aa11.59□□□□□ -0.55
PDLIM2-217ENST00000491330 NDFIP1Q9BT67 221 aa11.59□□□□□ -0.55
PDLIM2-217ENST00000491330 PGPA6NDG6 321 aa11.58□□□□□ -0.56
PDLIM2-217ENST00000491330 DIRC3C9JPN6 131 aa11.58□□□□□ -0.56
PDLIM2-217ENST00000491330 CXorf1O96002 111 aa11.58□□□□□ -0.56
PDLIM2-217ENST00000491330 C6orf223Q8N319 242 aa11.58□□□□□ -0.56
PDLIM2-217ENST00000491330 ZNRF2Q8NHG8 242 aa11.58□□□□□ -0.56
PDLIM2-217ENST00000491330 ST6GAL2Q96JF0 529 aa11.58□□□□□ -0.56
PDLIM2-217ENST00000491330 Q9H8V8 135 aa11.58□□□□□ -0.56
PDLIM2-217ENST00000491330 LINC00588Q9Y4M8 146 aa11.58□□□□□ -0.56
PDLIM2-217ENST00000491330 TRGV11A0A075B6L2 103 aa11.57□□□□□ -0.56
PDLIM2-217ENST00000491330 HMSDA8MTL9 139 aa11.57□□□□□ -0.56
PDLIM2-217ENST00000491330 ZFAND2AQ8N6M9 145 aa11.57□□□□□ -0.56
PDLIM2-217ENST00000491330 RAB24Q969Q5 203 aa11.57□□□□□ -0.56
PDLIM2-217ENST00000491330 SPXQ9BT56 116 aa11.57□□□□□ -0.56
PDLIM2-217ENST00000491330 TMPRSS5Q9H3S3 457 aa11.57□□□□□ -0.56
PDLIM2-217ENST00000491330 RPH3ALQ9UNE2 315 aa11.57□□□□□ -0.56
PDLIM2-217ENST00000491330 ARPC5O15511 151 aa11.56□□□□□ -0.56
PDLIM2-217ENST00000491330 PAX4O43316 350 aa11.56□□□□□ -0.56
PDLIM2-217ENST00000491330 SPINK4O60575 86 aa11.56□□□□□ -0.56
PDLIM2-217ENST00000491330 ARL14EPLP0DKL9 152 aa11.56□□□□□ -0.56
PDLIM2-217ENST00000491330 RPL7L1Q6DKI1 246 aaKnown RBP11.56□□□□□ -0.56
PDLIM2-217ENST00000491330 C11orf72Q8NBR9 251 aa11.56□□□□□ -0.56
PDLIM2-217ENST00000491330 NKX6-2Q9C056 277 aaPredicted RBP11.56□□□□□ -0.56
PDLIM2-217ENST00000491330 ICOSQ9Y6W8 199 aa11.56□□□□□ -0.56
PDLIM2-217ENST00000491330 A0A0D9SG52 128 aa11.55□□□□□ -0.56
PDLIM2-217ENST00000491330 CTXND1A0A1B0GTU2 59 aa11.55□□□□□ -0.56
PDLIM2-217ENST00000491330 A0A1W2PPQ1 181 aa11.55□□□□□ -0.56
PDLIM2-217ENST00000491330 G3V3Q6 166 aa11.55□□□□□ -0.56
PDLIM2-217ENST00000491330 MED14OSP0DP75 135 aa11.55□□□□□ -0.56
PDLIM2-217ENST00000491330 BTF3P20290 206 aaKnown RBP11.55□□□□□ -0.56
PDLIM2-217ENST00000491330 HOXA5P20719 270 aa11.55□□□□□ -0.56
PDLIM2-217ENST00000491330 GCHFRP30047 84 aa11.55□□□□□ -0.56
PDLIM2-217ENST00000491330 EIF5AP63241 154 aaKnown RBP11.55□□□□□ -0.56
PDLIM2-217ENST00000491330 AKR1C8PQ5T2L2 129 aa11.55□□□□□ -0.56
PDLIM2-217ENST00000491330 C5orf17Q8NAS9 161 aa11.55□□□□□ -0.56
PDLIM2-217ENST00000491330 Q8TAT8 98 aa11.55□□□□□ -0.56
PDLIM2-217ENST00000491330 PRO0255Q9UI72 69 aa11.55□□□□□ -0.56
PDLIM2-217ENST00000491330 KLF12Q9Y4X4 402 aa11.55□□□□□ -0.56
PDLIM2-217ENST00000491330 TRGV4A0A0C4DH28 118 aa11.54□□□□□ -0.56
PDLIM2-217ENST00000491330 A0A1W2PRE2 83 aa11.54□□□□□ -0.56
PDLIM2-217ENST00000491330 Q6AWC8 147 aa11.54□□□□□ -0.56
PDLIM2-217ENST00000491330 PCNPQ8WW12 178 aaKnown RBP11.54□□□□□ -0.56
PDLIM2-217ENST00000491330 KCNS1Q96KK3 526 aa11.54□□□□□ -0.56
PDLIM2-217ENST00000491330 MRPS16Q9Y3D3 137 aaKnown RBP11.54□□□□□ -0.56
PDLIM2-217ENST00000491330 TRAV21A0A0B4J279 112 aa11.53□□□□□ -0.56
PDLIM2-217ENST00000491330 MRPL23Q16540 153 aaKnown RBP11.53□□□□□ -0.56
PDLIM2-217ENST00000491330 MUC21Q5SSG8 566 aa11.53□□□□□ -0.56
PDLIM2-217ENST00000491330 KCNRGQ8N5I3 272 aa11.53□□□□□ -0.56
PDLIM2-217ENST00000491330 UPK3BQ9BT76 320 aa11.53□□□□□ -0.56
PDLIM2-217ENST00000491330 SH3BGRL3Q9H299 93 aa11.53□□□□□ -0.56
PDLIM2-217ENST00000491330 NAGKQ9UJ70 344 aa11.53□□□□□ -0.56
PDLIM2-217ENST00000491330 HHLA3Q9XRX5 114 aa11.53□□□□□ -0.56
PDLIM2-217ENST00000491330 A0A1B0GVY2 172 aa11.52□□□□□ -0.57
PDLIM2-217ENST00000491330 TMEM183BQ1AE95 376 aa11.52□□□□□ -0.57
PDLIM2-217ENST00000491330 ZFP69Q49AA0 526 aa11.52□□□□□ -0.57
PDLIM2-217ENST00000491330 GOLT1AQ6ZVE7 132 aa11.52□□□□□ -0.57
PDLIM2-217ENST00000491330 TMEM183AQ8IXX5 376 aa11.52□□□□□ -0.57
PDLIM2-217ENST00000491330 TCEAL7Q9BRU2 100 aa11.52□□□□□ -0.57
PDLIM2-217ENST00000491330 TREM1Q9NP99 234 aa11.52□□□□□ -0.57
PDLIM2-217ENST00000491330 MRPL16Q9NX20 251 aaKnown RBP11.52□□□□□ -0.57
PDLIM2-217ENST00000491330 TP53TG3Q9ULZ0 132 aa11.52□□□□□ -0.57
PDLIM2-217ENST00000491330 TRAV9-2A0A087WT02 112 aa11.51□□□□□ -0.57
PDLIM2-217ENST00000491330 UMAD1C9J7I0 102 aa11.51□□□□□ -0.57
PDLIM2-217ENST00000491330 IGHV3-53P01767 116 aa11.51□□□□□ -0.57
PDLIM2-217ENST00000491330 SEC11BP0C7V7 166 aa11.51□□□□□ -0.57
PDLIM2-217ENST00000491330 ESRGQ1W209 222 aa11.51□□□□□ -0.57
PDLIM2-217ENST00000491330 STOML3Q8TAV4 291 aa11.51□□□□□ -0.57
PDLIM2-217ENST00000491330 SDF2L1Q9HCN8 221 aa11.51□□□□□ -0.57
PDLIM2-217ENST00000491330 ARL2-SNX15V9GYD0 113 aa11.51□□□□□ -0.57
PDLIM2-217ENST00000491330 KANTRA0A1W2PQU2 76 aa11.5□□□□□ -0.57
PDLIM2-217ENST00000491330 HMGB3O15347 200 aaKnown RBP11.5□□□□□ -0.57
PDLIM2-217ENST00000491330 ORM1P02763 201 aa11.5□□□□□ -0.57
PDLIM2-217ENST00000491330 TDRG1Q3Y452 100 aa11.5□□□□□ -0.57
PDLIM2-217ENST00000491330 CYTL1Q9NRR1 136 aa11.5□□□□□ -0.57
PDLIM2-217ENST00000491330 KMT2AQ03164 3969 aa11.5□□□□□ -0.57
PDLIM2-217ENST00000491330 TCRAP04437 139 aa11.49□□□□□ -0.57
PDLIM2-217ENST00000491330 SRIP30626 198 aa11.49□□□□□ -0.57
PDLIM2-217ENST00000491330 PRR9Q5T870 116 aa11.49□□□□□ -0.57
PDLIM2-217ENST00000491330 DPPA3Q6W0C5 159 aa11.49□□□□□ -0.57
PDLIM2-217ENST00000491330 NEGR1Q7Z3B1 354 aa11.49□□□□□ -0.57
PDLIM2-217ENST00000491330 IQCF2Q8IXL9 164 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms