RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 GCN1Q92616 2671 aaKnown RBP-0.6□□□□□ -2.51
CCDC93-209ENST00000488908 NUP210LQ5VU65 1888 aa-0.61□□□□□ -2.51
CCDC93-209ENST00000488908 SVEP1Q4LDE5 3571 aa-0.61□□□□□ -2.51
CCDC93-209ENST00000488908 NINQ8N4C6 2090 aa-0.61□□□□□ -2.51
CCDC93-209ENST00000488908 CCDC144AA2RUR9 1427 aa-0.61□□□□□ -2.51
CCDC93-209ENST00000488908 DNHD1Q96M86 4753 aa-0.61□□□□□ -2.51
CCDC93-209ENST00000488908 LOC101927531A0A1B0GV80 90 aa-0.61□□□□□ -2.51
CCDC93-209ENST00000488908 BBIP1A8MTZ0 92 aa-0.61□□□□□ -2.51
CCDC93-209ENST00000488908 CST7O76096 145 aa-0.61□□□□□ -2.51
CCDC93-209ENST00000488908 NDUFC2O95298 119 aa-0.61□□□□□ -2.51
CCDC93-209ENST00000488908 IGF2P01344 180 aa-0.61□□□□□ -2.51
CCDC93-209ENST00000488908 RPS17P08708 135 aaKnown RBP-0.61□□□□□ -2.51
CCDC93-209ENST00000488908 MRPS36P82909 103 aaKnown RBP-0.61□□□□□ -2.51
CCDC93-209ENST00000488908 TAF1AQ15573 450 aaPredicted RBP-0.61□□□□□ -2.51
CCDC93-209ENST00000488908 FKBP1CQ5VVH2 108 aa-0.61□□□□□ -2.51
CCDC93-209ENST00000488908 IZUMO2Q6UXV1 221 aa-0.61□□□□□ -2.51
CCDC93-209ENST00000488908 TCTEX1D1Q8N7M0 179 aa-0.61□□□□□ -2.51
CCDC93-209ENST00000488908 OR4C12Q96R67 309 aa-0.61□□□□□ -2.51
CCDC93-209ENST00000488908 OR2J1Q9GZK6 312 aa-0.61□□□□□ -2.51
CCDC93-209ENST00000488908 FAM32AQ9Y421 112 aaKnown RBP-0.61□□□□□ -2.51
CCDC93-209ENST00000488908 AKAP6Q13023 2319 aa-0.61□□□□□ -2.51
CCDC93-209ENST00000488908 NBEAQ8NFP9 2946 aa-0.61□□□□□ -2.51
CCDC93-209ENST00000488908 FRMPD1Q5SYB0 1578 aa-0.62□□□□□ -2.51
CCDC93-209ENST00000488908 LAMC3Q9Y6N6 1575 aa-0.62□□□□□ -2.51
CCDC93-209ENST00000488908 ABCA1O95477 2261 aa-0.62□□□□□ -2.51
CCDC93-209ENST00000488908 CSMD3Q7Z407 3707 aa-0.62□□□□□ -2.51
CCDC93-209ENST00000488908 A0A1W2PPB8 328 aa-0.62□□□□□ -2.51
CCDC93-209ENST00000488908 KIR3DP1A8MWS1 328 aa-0.62□□□□□ -2.51
CCDC93-209ENST00000488908 K7ERJ3 54 aa-0.62□□□□□ -2.51
CCDC93-209ENST00000488908 LYPLA2O95372 231 aa-0.62□□□□□ -2.51
CCDC93-209ENST00000488908 TRGC2P03986 189 aa-0.62□□□□□ -2.51
CCDC93-209ENST00000488908 MPC1LP0DKB6 136 aa-0.62□□□□□ -2.51
CCDC93-209ENST00000488908 PHBP35232 272 aa-0.62□□□□□ -2.51
CCDC93-209ENST00000488908 HSPE1P61604 102 aaKnown RBP-0.62□□□□□ -2.51
CCDC93-209ENST00000488908 LSM6P62312 80 aaKnown RBP-0.62□□□□□ -2.51
CCDC93-209ENST00000488908 CSAG1Q6PB30 78 aa-0.62□□□□□ -2.51
CCDC93-209ENST00000488908 PHF5AQ7RTV0 110 aaKnown RBP-0.62□□□□□ -2.51
CCDC93-209ENST00000488908 TMEM229BQ8NBD8 167 aa-0.62□□□□□ -2.51
CCDC93-209ENST00000488908 OR5AK2Q8NH90 309 aa-0.62□□□□□ -2.51
CCDC93-209ENST00000488908 NAT14Q8WUY8 206 aa-0.62□□□□□ -2.51
CCDC93-209ENST00000488908 ISOC1Q96CN7 298 aa-0.62□□□□□ -2.51
CCDC93-209ENST00000488908 MCEEQ96PE7 176 aa-0.62□□□□□ -2.51
CCDC93-209ENST00000488908 CIB3Q96Q77 187 aaPredicted RBP-0.62□□□□□ -2.51
CCDC93-209ENST00000488908 DSCR8Q96T75 97 aa-0.62□□□□□ -2.51
CCDC93-209ENST00000488908 BIN3Q9NQY0 253 aa-0.62□□□□□ -2.51
CCDC93-209ENST00000488908 MRPL36Q9P0J6 103 aaKnown RBP-0.62□□□□□ -2.51
CCDC93-209ENST00000488908 ASB4Q9Y574 426 aa-0.62□□□□□ -2.51
CCDC93-209ENST00000488908 MUC17Q685J3 4493 aa-0.62□□□□□ -2.51
CCDC93-209ENST00000488908 LAMA3Q16787 3333 aa-0.62□□□□□ -2.51
CCDC93-209ENST00000488908 MAP2P11137 1827 aaKnown RBP-0.62□□□□□ -2.51
CCDC93-209ENST00000488908 SOGA1O94964 1423 aa-0.63□□□□□ -2.51
CCDC93-209ENST00000488908 KIAA1107Q9UPP5 1409 aa-0.63□□□□□ -2.51
CCDC93-209ENST00000488908 KIAA1549LQ6ZVL6 1849 aa-0.63□□□□□ -2.51
CCDC93-209ENST00000488908 C3orf85A0A1B0GTC6 90 aa-0.63□□□□□ -2.51
CCDC93-209ENST00000488908 ARL5CA6NH57 179 aa-0.63□□□□□ -2.51
CCDC93-209ENST00000488908 TRACP01848 142 aa-0.63□□□□□ -2.51
CCDC93-209ENST00000488908 APOA2P02652 100 aa-0.63□□□□□ -2.51
CCDC93-209ENST00000488908 OGNP20774 298 aaKnown RBP-0.63□□□□□ -2.51
CCDC93-209ENST00000488908 GLRXP35754 106 aa-0.63□□□□□ -2.51
CCDC93-209ENST00000488908 RPL35P42766 123 aaKnown RBP-0.63□□□□□ -2.51
CCDC93-209ENST00000488908 INSL3P51460 131 aa-0.63□□□□□ -2.51
CCDC93-209ENST00000488908 NCALDP61601 193 aa-0.63□□□□□ -2.51
CCDC93-209ENST00000488908 HBBP68871 147 aa-0.63□□□□□ -2.51
CCDC93-209ENST00000488908 CCSMST1Q4G0I0 132 aa-0.63□□□□□ -2.51
CCDC93-209ENST00000488908 PTRHD1Q6GMV3 140 aaKnown RBP-0.63□□□□□ -2.51
CCDC93-209ENST00000488908 OR8J2Q8NGG1 315 aa-0.63□□□□□ -2.51
CCDC93-209ENST00000488908 SPAG17Q6Q759 2223 aa-0.63□□□□□ -2.51
CCDC93-209ENST00000488908 LRRK2Q5S007 2527 aa-0.63□□□□□ -2.51
CCDC93-209ENST00000488908 PIK3C2AO00443 1686 aa-0.63□□□□□ -2.51
CCDC93-209ENST00000488908 N4BP2Q86UW6 1770 aaPredicted RBP-0.63□□□□□ -2.51
CCDC93-209ENST00000488908 UHRF1BP1Q6BDS2 1440 aa-0.64□□□□□ -2.51
CCDC93-209ENST00000488908 MTORP42345 2549 aa-0.64□□□□□ -2.51
CCDC93-209ENST00000488908 MGAM2Q2M2H8 2515 aa-0.64□□□□□ -2.51
CCDC93-209ENST00000488908 CEP295Q9C0D2 2601 aa-0.64□□□□□ -2.51
CCDC93-209ENST00000488908 DNAH3Q8TD57 4116 aa-0.64□□□□□ -2.51
CCDC93-209ENST00000488908 ANK1P16157 1881 aa-0.64□□□□□ -2.51
CCDC93-209ENST00000488908 CAMSAP2Q08AD1 1489 aa-0.64□□□□□ -2.51
CCDC93-209ENST00000488908 RTL9Q8NET4 1388 aa-0.64□□□□□ -2.51
CCDC93-209ENST00000488908 A0A0G2JMM0 328 aa-0.64□□□□□ -2.51
CCDC93-209ENST00000488908 LOC730098B7Z3J9 87 aa-0.64□□□□□ -2.51
CCDC93-209ENST00000488908 F2Z2F3 143 aa-0.64□□□□□ -2.51
CCDC93-209ENST00000488908 C1QBP02746 253 aa-0.64□□□□□ -2.51
CCDC93-209ENST00000488908 FABP4P15090 132 aa-0.64□□□□□ -2.51
CCDC93-209ENST00000488908 SPRR2EP22531 72 aa-0.64□□□□□ -2.51
CCDC93-209ENST00000488908 SPRR2AP35326 72 aa-0.64□□□□□ -2.51
CCDC93-209ENST00000488908 NDUFA6P56556 154 aa-0.64□□□□□ -2.51
CCDC93-209ENST00000488908 DNAJB13P59910 316 aa-0.64□□□□□ -2.51
CCDC93-209ENST00000488908 CCL7P80098 99 aa-0.64□□□□□ -2.51
CCDC93-209ENST00000488908 MSMO1Q15800 293 aa-0.64□□□□□ -2.51
CCDC93-209ENST00000488908 C1orf140Q5VVS0 124 aa-0.64□□□□□ -2.51
CCDC93-209ENST00000488908 OR4B1Q8NGF8 309 aa-0.64□□□□□ -2.51
CCDC93-209ENST00000488908 CCL4L1Q8NHW4 92 aa-0.64□□□□□ -2.51
CCDC93-209ENST00000488908 NEK7Q8TDX7 302 aa-0.64□□□□□ -2.51
CCDC93-209ENST00000488908 GPX7Q96SL4 187 aaPredicted RBP-0.64□□□□□ -2.51
CCDC93-209ENST00000488908 OR2H1Q9GZK4 316 aa-0.64□□□□□ -2.51
CCDC93-209ENST00000488908 C19orf12Q9NSK7 152 aa-0.64□□□□□ -2.51
CCDC93-209ENST00000488908 ADGRL3Q9HAR2 1447 aa-0.64□□□□□ -2.51
CCDC93-209ENST00000488908 URB1O60287 2271 aaKnown RBP-0.64□□□□□ -2.51
CCDC93-209ENST00000488908 GVINP1Q7Z2Y8 2422 aa-0.65□□□□□ -2.51
CCDC93-209ENST00000488908 KALRNO60229 2985 aa-0.65□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms