RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 C16orf90A8MZG2 172 aa15.62■□□□□ 0.09
PTPN4-211ENST00000488279 Q6ZQT7 251 aa15.62■□□□□ 0.09
PTPN4-211ENST00000488279 Q8TAT8 98 aa15.62■□□□□ 0.09
PTPN4-211ENST00000488279 A0A1W2PPQ1 181 aa15.61■□□□□ 0.09
PTPN4-211ENST00000488279 RBAKDNA6NC62 111 aa15.61■□□□□ 0.09
PTPN4-211ENST00000488279 RPL12P30050 165 aaKnown RBP15.61■□□□□ 0.09
PTPN4-211ENST00000488279 UBE2L3P68036 154 aaKnown RBP15.61■□□□□ 0.09
PTPN4-211ENST00000488279 ST6GAL2Q96JF0 529 aa15.61■□□□□ 0.09
PTPN4-211ENST00000488279 SMIM3Q9BZL3 60 aa15.61■□□□□ 0.09
PTPN4-211ENST00000488279 TAS2R45P59539 299 aa15.6■□□□□ 0.09
PTPN4-211ENST00000488279 KHDC3LQ587J8 217 aa15.6■□□□□ 0.09
PTPN4-211ENST00000488279 KRTAP1-5Q9BYS1 174 aa15.6■□□□□ 0.09
PTPN4-211ENST00000488279 RYR1P21817 5038 aa15.59■□□□□ 0.09
PTPN4-211ENST00000488279 MRPL16Q9NX20 251 aaKnown RBP15.59■□□□□ 0.09
PTPN4-211ENST00000488279 PAX4O43316 350 aa15.58■□□□□ 0.08
PTPN4-211ENST00000488279 IGHV3-53P01767 116 aa15.58■□□□□ 0.08
PTPN4-211ENST00000488279 ZNF415Q09FC8 603 aa15.58■□□□□ 0.08
PTPN4-211ENST00000488279 SLAQ13239 276 aa15.58■□□□□ 0.08
PTPN4-211ENST00000488279 ZNF266Q14584 549 aa15.58■□□□□ 0.08
PTPN4-211ENST00000488279 DIRC3C9JPN6 131 aa15.57■□□□□ 0.08
PTPN4-211ENST00000488279 BTF3P20290 206 aaKnown RBP15.57■□□□□ 0.08
PTPN4-211ENST00000488279 MBD2Q9UBB5 411 aa15.57■□□□□ 0.08
PTPN4-211ENST00000488279 PRO0255Q9UI72 69 aa15.57■□□□□ 0.08
PTPN4-211ENST00000488279 HHLA3Q9XRX5 114 aa15.57■□□□□ 0.08
PTPN4-211ENST00000488279 LENEPQ9Y5L5 61 aa15.57■□□□□ 0.08
PTPN4-211ENST00000488279 ICOSQ9Y6W8 199 aa15.57■□□□□ 0.08
PTPN4-211ENST00000488279 MUC21Q5SSG8 566 aa15.56■□□□□ 0.08
PTPN4-211ENST00000488279 HYLS1Q96M11 299 aa15.56■□□□□ 0.08
PTPN4-211ENST00000488279 MUC4Q99102 2169 aa15.56■□□□□ 0.08
PTPN4-211ENST00000488279 PGPA6NDG6 321 aa15.54■□□□□ 0.08
PTPN4-211ENST00000488279 ACOT6Q3I5F7 207 aaPredicted RBP15.54■□□□□ 0.08
PTPN4-211ENST00000488279 FAM74A1Q5RGS3 127 aa15.54■□□□□ 0.08
PTPN4-211ENST00000488279 Q6AWC8 147 aa15.54■□□□□ 0.08
PTPN4-211ENST00000488279 FAM159AQ6UWV7 190 aa15.54■□□□□ 0.08
PTPN4-211ENST00000488279 CMTM2Q8TAZ6 248 aa15.54■□□□□ 0.08
PTPN4-211ENST00000488279 TMED6Q8WW62 240 aa15.54■□□□□ 0.08
PTPN4-211ENST00000488279 WFDC1Q9HC57 220 aa15.54■□□□□ 0.08
PTPN4-211ENST00000488279 OTORQ9NRC9 128 aa15.54■□□□□ 0.08
PTPN4-211ENST00000488279 MDFICQ9P1T7 246 aa15.54■□□□□ 0.08
PTPN4-211ENST00000488279 A0A1W2PPV4 95 aa15.53■□□□□ 0.08
PTPN4-211ENST00000488279 SIVA1O15304 175 aa15.53■□□□□ 0.08
PTPN4-211ENST00000488279 CRYBA4P53673 196 aa15.53■□□□□ 0.08
PTPN4-211ENST00000488279 FHL2Q14192 279 aa15.53■□□□□ 0.08
PTPN4-211ENST00000488279 C8orf49Q96NF6 230 aa15.53■□□□□ 0.08
PTPN4-211ENST00000488279 LRP1BQ9NZR2 4599 aa15.52■□□□□ 0.08
PTPN4-211ENST00000488279 EIF3GO75821 320 aaKnown RBP eCLIP15.52■□□□□ 0.08
PTPN4-211ENST00000488279 CDK2AP2O75956 126 aa15.52■□□□□ 0.08
PTPN4-211ENST00000488279 PQLC2Q6ZP29 291 aa15.52■□□□□ 0.08
PTPN4-211ENST00000488279 SPATA12Q7Z6I5 190 aa15.52■□□□□ 0.08
PTPN4-211ENST00000488279 SPXQ9BT56 116 aa15.52■□□□□ 0.08
PTPN4-211ENST00000488279 HSPG2P98160 4391 aa15.52■□□□□ 0.07
PTPN4-211ENST00000488279 TRGV11A0A075B6L2 103 aa15.51■□□□□ 0.07
PTPN4-211ENST00000488279 TRGV4A0A0C4DH28 118 aa15.51■□□□□ 0.07
PTPN4-211ENST00000488279 MRPL23Q16540 153 aaKnown RBP15.51■□□□□ 0.07
PTPN4-211ENST00000488279 TMEM183BQ1AE95 376 aa15.51■□□□□ 0.07
PTPN4-211ENST00000488279 TMEM183AQ8IXX5 376 aa15.51■□□□□ 0.07
PTPN4-211ENST00000488279 NXPH4O95158 308 aa15.5■□□□□ 0.07
PTPN4-211ENST00000488279 IQCF2Q8IXL9 164 aa15.5■□□□□ 0.07
PTPN4-211ENST00000488279 ARL6IP6Q8N6S5 226 aa15.5■□□□□ 0.07
PTPN4-211ENST00000488279 RASL10AQ92737 203 aa15.5■□□□□ 0.07
PTPN4-211ENST00000488279 RPH3ALQ9UNE2 315 aa15.5■□□□□ 0.07
PTPN4-211ENST00000488279 LINC00315P59091 139 aa15.49■□□□□ 0.07
PTPN4-211ENST00000488279 LYPD5Q6UWN5 251 aa15.49■□□□□ 0.07
PTPN4-211ENST00000488279 OR10G4Q8NGN3 311 aa15.49■□□□□ 0.07
PTPN4-211ENST00000488279 OR10G9Q8NGN4 311 aa15.49■□□□□ 0.07
PTPN4-211ENST00000488279 OR10G7Q8NGN6 311 aa15.49■□□□□ 0.07
PTPN4-211ENST00000488279 NAGKQ9UJ70 344 aa15.49■□□□□ 0.07
PTPN4-211ENST00000488279 RAB2AP61019 212 aa15.48■□□□□ 0.07
PTPN4-211ENST00000488279 TDRG1Q3Y452 100 aa15.48■□□□□ 0.07
PTPN4-211ENST00000488279 GOLT1AQ6ZVE7 132 aa15.48■□□□□ 0.07
PTPN4-211ENST00000488279 NEGR1Q7Z3B1 354 aa15.48■□□□□ 0.07
PTPN4-211ENST00000488279 SFTA3P0C7M3 94 aa15.47■□□□□ 0.07
PTPN4-211ENST00000488279 ZNF479Q96JC4 524 aa15.47■□□□□ 0.07
PTPN4-211ENST00000488279 TRAV21A0A0B4J279 112 aa15.46■□□□□ 0.07
PTPN4-211ENST00000488279 HMGB3O15347 200 aaKnown RBP15.46■□□□□ 0.07
PTPN4-211ENST00000488279 KRTAP4-5Q9BYR2 181 aa15.46■□□□□ 0.07
PTPN4-211ENST00000488279 TREM1Q9NP99 234 aa15.46■□□□□ 0.07
PTPN4-211ENST00000488279 ALG5Q9Y673 324 aa15.46■□□□□ 0.07
PTPN4-211ENST00000488279 ABCA13Q86UQ4 5058 aa15.46■□□□□ 0.07
PTPN4-211ENST00000488279 K7EQD1 137 aa15.45■□□□□ 0.06
PTPN4-211ENST00000488279 GNRH2O43555 120 aa15.45■□□□□ 0.06
PTPN4-211ENST00000488279 SRIP30626 198 aa15.45■□□□□ 0.06
PTPN4-211ENST00000488279 KRTAP10-2P60368 255 aa15.45■□□□□ 0.06
PTPN4-211ENST00000488279 PCNPQ8WW12 178 aaKnown RBP15.45■□□□□ 0.06
PTPN4-211ENST00000488279 TRAV9-2A0A087WT02 112 aa15.44■□□□□ 0.06
PTPN4-211ENST00000488279 TRAV8-1A0A0A6YYK1 113 aa15.44■□□□□ 0.06
PTPN4-211ENST00000488279 M0R2P5 195 aa15.44■□□□□ 0.06
PTPN4-211ENST00000488279 ORM1P02763 201 aa15.44■□□□□ 0.06
PTPN4-211ENST00000488279 TVP23CQ96ET8 276 aa15.44■□□□□ 0.06
PTPN4-211ENST00000488279 BATF3Q9NR55 127 aa15.44■□□□□ 0.06
PTPN4-211ENST00000488279 TRAV4A0A0B4J268 109 aa15.43■□□□□ 0.06
PTPN4-211ENST00000488279 IGHV3-16A0A0C4DH30 117 aa15.43■□□□□ 0.06
PTPN4-211ENST00000488279 ARL14EPLP0DKL9 152 aa15.43■□□□□ 0.06
PTPN4-211ENST00000488279 GYPEP15421 78 aa15.43■□□□□ 0.06
PTPN4-211ENST00000488279 CDC34P49427 236 aaPredicted RBP15.43■□□□□ 0.06
PTPN4-211ENST00000488279 Q6ZRN7 208 aaPredicted RBP15.43■□□□□ 0.06
PTPN4-211ENST00000488279 MAPKAPK5-AS1Q8N8E1 139 aa15.43■□□□□ 0.06
PTPN4-211ENST00000488279 OR4C5Q8NGB2 326 aa15.43■□□□□ 0.06
PTPN4-211ENST00000488279 OR2G3Q8NGZ4 309 aa15.43■□□□□ 0.06
PTPN4-211ENST00000488279 F6UZH7 168 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms