RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 OR4K15Q8NH41 348 aa2.1□□□□□ -2.07
SMC6-208ENST00000481708 CANT1Q8WVQ1 401 aa2.1□□□□□ -2.07
SMC6-208ENST00000481708 CMBLQ96DG6 245 aa2.1□□□□□ -2.07
SMC6-208ENST00000481708 LINC00479Q96M42 142 aa2.1□□□□□ -2.07
SMC6-208ENST00000481708 ALPK2Q86TB3 2170 aa2.09□□□□□ -2.07
SMC6-208ENST00000481708 IGKV1D-37A0A075B6S9 117 aa2.09□□□□□ -2.07
SMC6-208ENST00000481708 E7EQL1 145 aa2.09□□□□□ -2.07
SMC6-208ENST00000481708 TAX1BP3O14907 124 aa2.09□□□□□ -2.07
SMC6-208ENST00000481708 LECT2O14960 151 aa2.09□□□□□ -2.07
SMC6-208ENST00000481708 CXCL1P09341 107 aa2.09□□□□□ -2.07
SMC6-208ENST00000481708 SLC48A1Q6P1K1 146 aa2.09□□□□□ -2.07
SMC6-208ENST00000481708 HAGHLQ6PII5 290 aaPredicted RBP2.09□□□□□ -2.07
SMC6-208ENST00000481708 PDZD9Q8IXQ8 264 aa2.09□□□□□ -2.07
SMC6-208ENST00000481708 MAPK1IP1LQ8NDC0 245 aa2.09□□□□□ -2.07
SMC6-208ENST00000481708 DERL1Q9BUN8 251 aa2.09□□□□□ -2.07
SMC6-208ENST00000481708 TMEM126AQ9H061 195 aa2.09□□□□□ -2.07
SMC6-208ENST00000481708 OR5V1Q9UGF6 321 aa2.09□□□□□ -2.07
SMC6-208ENST00000481708 FIS1Q9Y3D6 152 aa2.09□□□□□ -2.07
SMC6-208ENST00000481708 TRGV5A0A0B4J1U4 118 aa2.09□□□□□ -2.07
SMC6-208ENST00000481708 A0A1B0GVG6 124 aa2.09□□□□□ -2.07
SMC6-208ENST00000481708 TMEM223A0PJW6 202 aa2.09□□□□□ -2.07
SMC6-208ENST00000481708 IGLC6P0CF74 106 aa2.09□□□□□ -2.07
SMC6-208ENST00000481708 UBE2AP49459 152 aa2.09□□□□□ -2.07
SMC6-208ENST00000481708 OR4C16Q8NGL9 310 aa2.09□□□□□ -2.07
SMC6-208ENST00000481708 RHOXF1Q8NHV9 184 aa2.09□□□□□ -2.07
SMC6-208ENST00000481708 IL36BQ9NZH7 164 aa2.09□□□□□ -2.07
SMC6-208ENST00000481708 MDFICQ9P1T7 246 aa2.09□□□□□ -2.07
SMC6-208ENST00000481708 KAAG1Q9UBP8 84 aa2.09□□□□□ -2.07
SMC6-208ENST00000481708 MOB4Q9Y3A3 225 aa2.09□□□□□ -2.07
SMC6-208ENST00000481708 TMEM269A0A1B0GVZ9 245 aa2.09□□□□□ -2.08
SMC6-208ENST00000481708 C3orf84H3BNL1 204 aa2.09□□□□□ -2.08
SMC6-208ENST00000481708 OR1I1O60431 355 aa2.09□□□□□ -2.08
SMC6-208ENST00000481708 RNASE4P34096 147 aaKnown RBP2.09□□□□□ -2.08
SMC6-208ENST00000481708 LINC01554Q52M75 96 aa2.09□□□□□ -2.08
SMC6-208ENST00000481708 TMEM244Q5VVB8 128 aa2.09□□□□□ -2.08
SMC6-208ENST00000481708 Q5W150 140 aa2.09□□□□□ -2.08
SMC6-208ENST00000481708 LYG1Q8N1E2 194 aa2.09□□□□□ -2.08
SMC6-208ENST00000481708 LCN9Q8WX39 176 aa2.09□□□□□ -2.08
SMC6-208ENST00000481708 SPIN2AQ99865 258 aa2.09□□□□□ -2.08
SMC6-208ENST00000481708 SPIN2BQ9BPZ2 258 aa2.09□□□□□ -2.08
SMC6-208ENST00000481708 CHCHD7Q9BUK0 85 aa2.09□□□□□ -2.08
SMC6-208ENST00000481708 LRP2P98164 4655 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 MALRD1Q5VYJ5 2156 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 A0A096LNJ9 63 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 LCE6AA0A183 80 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 LINC00862A6NCI5 91 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 B4DSR2 109 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 OR2T1O43869 369 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 IFNGP01579 166 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 SCTP09683 121 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 AZU1P20160 251 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 PPIBP23284 216 aaKnown RBP2.08□□□□□ -2.08
SMC6-208ENST00000481708 S100PP25815 95 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 AADACL3Q5VUY0 350 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 PCP2Q8IVA1 136 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 TERB2Q8NHR7 220 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 TP53RKQ96S44 253 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 GFRA4Q9GZZ7 299 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 FAM96AQ9H5X1 160 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 EFCAB1Q9HAE3 211 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 USF3Q68DE3 2245 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 A6NED7 52 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 H3BMM0 161 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 ZNF705DP0CH99 300 aaPredicted RBP2.08□□□□□ -2.08
SMC6-208ENST00000481708 LCA10Q71F78 164 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 NUP35Q8NFH5 326 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 UBE2WQ96B02 151 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 GABARAPL1Q9H0R8 117 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 AK3Q9UIJ7 227 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 MPDZO75970 2070 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 A0A1B0GV50 99 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 C1orf196B1AJZ1 125 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 RGS5O15539 181 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 SULT1C4O75897 302 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 RBP4P02753 201 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 CAV1Q03135 178 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 FUT5Q11128 374 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 EIF4EBP1Q13541 118 aaPredicted RBP2.08□□□□□ -2.08
SMC6-208ENST00000481708 C10orf128Q5T292 105 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 HCP5Q6MZN7 132 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 MIR7-3HGQ8N6C7 128 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 C1orf64Q8NEQ6 169 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 RBPMSQ93062 196 aaKnown RBP2.08□□□□□ -2.08
SMC6-208ENST00000481708 TSLPQ969D9 159 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 TOMM6Q96B49 74 aa2.08□□□□□ -2.08
SMC6-208ENST00000481708 BOKQ9UMX3 212 aaPredicted RBP2.08□□□□□ -2.08
SMC6-208ENST00000481708 ABCA1O95477 2261 aa2.07□□□□□ -2.08
SMC6-208ENST00000481708 K7ERJ3 54 aa2.07□□□□□ -2.08
SMC6-208ENST00000481708 LEPROTO15243 131 aa2.07□□□□□ -2.08
SMC6-208ENST00000481708 IGKV3-20P01619 116 aa2.07□□□□□ -2.08
SMC6-208ENST00000481708 HLA-DQA1P01909 254 aa2.07□□□□□ -2.08
SMC6-208ENST00000481708 RBP1P09455 135 aa2.07□□□□□ -2.08
SMC6-208ENST00000481708 VEGFCP49767 419 aa2.07□□□□□ -2.08
SMC6-208ENST00000481708 DIAPH2-AS1Q14236 149 aa2.07□□□□□ -2.08
SMC6-208ENST00000481708 AMN1Q8IY45 258 aa2.07□□□□□ -2.08
SMC6-208ENST00000481708 SLC25A21Q9BQT8 299 aaPredicted RBP2.07□□□□□ -2.08
SMC6-208ENST00000481708 NOTCH3Q9UM47 2321 aa2.07□□□□□ -2.08
SMC6-208ENST00000481708 UQCRHLA0A096LP55 91 aa2.07□□□□□ -2.08
SMC6-208ENST00000481708 IGHV3-21A0A0B4J1V1 117 aa2.07□□□□□ -2.08
SMC6-208ENST00000481708 HLA-DMBP28068 263 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms