RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 TSSC4Q9Y5U2 329 aaPredicted RBP11.06□□□□□ -0.64
NR1H3-220ENST00000481020 IGKV3D-20A0A0C4DH25 116 aa11.05□□□□□ -0.64
NR1H3-220ENST00000481020 WFDC2Q14508 124 aa11.05□□□□□ -0.64
NR1H3-220ENST00000481020 TMEM78Q5T7P6 136 aa11.05□□□□□ -0.64
NR1H3-220ENST00000481020 C9orf47Q6ZRZ4 202 aa11.05□□□□□ -0.64
NR1H3-220ENST00000481020 SMIM2Q9BVW6 85 aa11.05□□□□□ -0.64
NR1H3-220ENST00000481020 IGHV7-4-1A0A0J9YVY3 117 aa11.04□□□□□ -0.64
NR1H3-220ENST00000481020 FAM110DQ8TAY7 271 aaPredicted RBP11.04□□□□□ -0.64
NR1H3-220ENST00000481020 TOMM6Q96B49 74 aa11.04□□□□□ -0.64
NR1H3-220ENST00000481020 TIMD4Q96H15 378 aa11.04□□□□□ -0.64
NR1H3-220ENST00000481020 MALRD1Q5VYJ5 2156 aa11.04□□□□□ -0.64
NR1H3-220ENST00000481020 M0R381 172 aa11.04□□□□□ -0.64
NR1H3-220ENST00000481020 MED14OSP0DP75 135 aa11.04□□□□□ -0.64
NR1H3-220ENST00000481020 HES1Q14469 280 aa11.04□□□□□ -0.64
NR1H3-220ENST00000481020 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.04□□□□□ -0.64
NR1H3-220ENST00000481020 MAPKAPK5-AS1Q8N8E1 139 aa11.04□□□□□ -0.64
NR1H3-220ENST00000481020 SPAG8Q99932 426 aaPredicted RBP11.04□□□□□ -0.64
NR1H3-220ENST00000481020 GTSF1LQ9H1H1 148 aa11.04□□□□□ -0.64
NR1H3-220ENST00000481020 ZFAND3Q9H8U3 227 aa11.04□□□□□ -0.64
NR1H3-220ENST00000481020 H3BMG7 143 aa11.03□□□□□ -0.64
NR1H3-220ENST00000481020 HOXA3O43365 443 aaPredicted RBP11.03□□□□□ -0.64
NR1H3-220ENST00000481020 PAPPA-AS1Q5QFB9 102 aa11.03□□□□□ -0.64
NR1H3-220ENST00000481020 TTTY13Q9BZ97 58 aa11.03□□□□□ -0.64
NR1H3-220ENST00000481020 CEP250Q9BV73 2442 aa11.02□□□□□ -0.65
NR1H3-220ENST00000481020 PLXNB1O43157 2135 aa11.02□□□□□ -0.65
NR1H3-220ENST00000481020 GAS8-AS1O95177 125 aa11.02□□□□□ -0.65
NR1H3-220ENST00000481020 DLX1P56177 255 aa11.02□□□□□ -0.65
NR1H3-220ENST00000481020 SMAGPQ0VAQ4 97 aa11.02□□□□□ -0.65
NR1H3-220ENST00000481020 CLEC2AQ6UVW9 174 aa11.02□□□□□ -0.65
NR1H3-220ENST00000481020 AGPAT4-IT1Q9H0P7 198 aa11.02□□□□□ -0.65
NR1H3-220ENST00000481020 NDPQ00604 133 aa11.01□□□□□ -0.65
NR1H3-220ENST00000481020 SPANXN1Q5VSR9 72 aa11.01□□□□□ -0.65
NR1H3-220ENST00000481020 NEXN-AS1Q8NBZ9 246 aa11.01□□□□□ -0.65
NR1H3-220ENST00000481020 DLX4Q92988 240 aaPredicted RBP11.01□□□□□ -0.65
NR1H3-220ENST00000481020 C1QTNF4Q9BXJ3 329 aa11.01□□□□□ -0.65
NR1H3-220ENST00000481020 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.01□□□□□ -0.65
NR1H3-220ENST00000481020 GATA1P15976 413 aaPredicted RBP11.01□□□□□ -0.65
NR1H3-220ENST00000481020 RPL32P62910 135 aaKnown RBP11.01□□□□□ -0.65
NR1H3-220ENST00000481020 ERCC8Q13216 396 aa11.01□□□□□ -0.65
NR1H3-220ENST00000481020 ETDBQ3ZM63 59 aa11.01□□□□□ -0.65
NR1H3-220ENST00000481020 S4R3C0 116 aa11.01□□□□□ -0.65
NR1H3-220ENST00000481020 URB1O60287 2271 aaKnown RBP11□□□□□ -0.65
NR1H3-220ENST00000481020 HLA-DMBP28068 263 aa11□□□□□ -0.65
NR1H3-220ENST00000481020 KLRD1Q13241 179 aa11□□□□□ -0.65
NR1H3-220ENST00000481020 SCGB3A1Q96QR1 104 aa11□□□□□ -0.65
NR1H3-220ENST00000481020 RAXQ9Y2V3 346 aa11□□□□□ -0.65
NR1H3-220ENST00000481020 TRBV7-1A0A0A6YYK4 115 aa10.99□□□□□ -0.65
NR1H3-220ENST00000481020 IGHV7-81A0A0B4J1V7 117 aa10.99□□□□□ -0.65
NR1H3-220ENST00000481020 IGHV1-69DA0A0B4J2H0 117 aa10.99□□□□□ -0.65
NR1H3-220ENST00000481020 PRAC2D3DTV9 90 aa10.99□□□□□ -0.65
NR1H3-220ENST00000481020 TRGV3P03979 118 aa10.99□□□□□ -0.65
NR1H3-220ENST00000481020 SUMO2P61956 95 aaKnown RBP10.99□□□□□ -0.65
NR1H3-220ENST00000481020 METTL26Q96S19 204 aa10.99□□□□□ -0.65
NR1H3-220ENST00000481020 U3KQE9 123 aa10.99□□□□□ -0.65
NR1H3-220ENST00000481020 ARFGEF3Q5TH69 2177 aa10.99□□□□□ -0.65
NR1H3-220ENST00000481020 PTPRZ1P23471 2315 aaPredicted RBP10.98□□□□□ -0.65
NR1H3-220ENST00000481020 TRBV20-1A0A075B6N2 111 aa10.98□□□□□ -0.65
NR1H3-220ENST00000481020 TRBV7-9A0A0J9YWB2 115 aa10.98□□□□□ -0.65
NR1H3-220ENST00000481020 APOMO95445 188 aa10.98□□□□□ -0.65
NR1H3-220ENST00000481020 CLEC3BP05452 202 aa10.98□□□□□ -0.65
NR1H3-220ENST00000481020 UBE2D1P51668 147 aa10.98□□□□□ -0.65
NR1H3-220ENST00000481020 FBXL19-AS1Q494R0 122 aa10.98□□□□□ -0.65
NR1H3-220ENST00000481020 CFAP126Q5VTH2 177 aa10.98□□□□□ -0.65
NR1H3-220ENST00000481020 C9orf139Q6ZV77 190 aa10.98□□□□□ -0.65
NR1H3-220ENST00000481020 VMO1Q7Z5L0 202 aa10.98□□□□□ -0.65
NR1H3-220ENST00000481020 SPOCK3Q9BQ16 436 aa10.98□□□□□ -0.65
NR1H3-220ENST00000481020 VKORC1Q9BQB6 163 aa10.98□□□□□ -0.65
NR1H3-220ENST00000481020 MRPL16Q9NX20 251 aaKnown RBP10.98□□□□□ -0.65
NR1H3-220ENST00000481020 C11orf21Q9P2W6 132 aa10.98□□□□□ -0.65
NR1H3-220ENST00000481020 UFC1Q9Y3C8 167 aa10.98□□□□□ -0.65
NR1H3-220ENST00000481020 SELENOKQ9Y6D0 94 aa10.98□□□□□ -0.65
NR1H3-220ENST00000481020 DMXL1Q9Y485 3027 aa10.98□□□□□ -0.65
NR1H3-220ENST00000481020 LGALS1P09382 135 aaKnown RBP10.98□□□□□ -0.65
NR1H3-220ENST00000481020 PRB3Q04118 309 aaPredicted RBP10.98□□□□□ -0.65
NR1H3-220ENST00000481020 FOXC1Q12948 553 aa10.98□□□□□ -0.65
NR1H3-220ENST00000481020 FOXI1Q12951 378 aa10.98□□□□□ -0.65
NR1H3-220ENST00000481020 C15orf32Q32M92 178 aa10.98□□□□□ -0.65
NR1H3-220ENST00000481020 MORN3Q6PF18 240 aaPredicted RBP10.98□□□□□ -0.65
NR1H3-220ENST00000481020 EEF1AKMT3Q96AZ1 226 aa10.98□□□□□ -0.65
NR1H3-220ENST00000481020 LINC00477Q96M19 166 aa10.98□□□□□ -0.65
NR1H3-220ENST00000481020 DPH3P1Q9H4G8 78 aa10.98□□□□□ -0.65
NR1H3-220ENST00000481020 CYSLTR1Q9Y271 337 aa10.98□□□□□ -0.65
NR1H3-220ENST00000481020 HERVK_113P61574 105 aa10.97□□□□□ -0.65
NR1H3-220ENST00000481020 SCGB2A2Q13296 93 aa10.97□□□□□ -0.65
NR1H3-220ENST00000481020 TRAV8-2A0A0B4J237 113 aa10.96□□□□□ -0.65
NR1H3-220ENST00000481020 CLPSL1A2RUU4 121 aa10.96□□□□□ -0.65
NR1H3-220ENST00000481020 M0QXV9 152 aa10.96□□□□□ -0.65
NR1H3-220ENST00000481020 PPIFP30405 207 aaKnown RBP10.96□□□□□ -0.65
NR1H3-220ENST00000481020 IGFL4Q6B9Z1 124 aa10.96□□□□□ -0.65
NR1H3-220ENST00000481020 C8orf86Q6ZUL3 223 aa10.96□□□□□ -0.65
NR1H3-220ENST00000481020 SH2D6Q7Z4S9 175 aa10.96□□□□□ -0.65
NR1H3-220ENST00000481020 POM121L12Q8N7R1 296 aa10.96□□□□□ -0.65
NR1H3-220ENST00000481020 Q8N9W7 124 aa10.96□□□□□ -0.65
NR1H3-220ENST00000481020 NBEAQ8NFP9 2946 aa10.95□□□□□ -0.66
NR1H3-220ENST00000481020 TRAV21A0A0B4J279 112 aa10.95□□□□□ -0.66
NR1H3-220ENST00000481020 LYNX1G3V0Z9 82 aa10.95□□□□□ -0.66
NR1H3-220ENST00000481020 LYNX1P0DP58 116 aa10.95□□□□□ -0.66
NR1H3-220ENST00000481020 UBE2D3P61077 147 aa10.95□□□□□ -0.66
NR1H3-220ENST00000481020 UBE2D2P62837 147 aa10.95□□□□□ -0.66
NR1H3-220ENST00000481020 PGPEP1Q9NXJ5 209 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms