RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 CCDC28AQ8IWP9 274 aa7.77□□□□□ -1.17
ATG4B-219ENST00000479941 TMEM75Q8N9X5 138 aa7.77□□□□□ -1.17
ATG4B-219ENST00000479941 C16orf74Q96GX8 76 aa7.77□□□□□ -1.17
ATG4B-219ENST00000479941 LINC00467Q9BRT7 94 aa7.77□□□□□ -1.17
ATG4B-219ENST00000479941 NDFIP1Q9BT67 221 aa7.77□□□□□ -1.17
ATG4B-219ENST00000479941 PSG8Q9UQ74 426 aa7.77□□□□□ -1.17
ATG4B-219ENST00000479941 PEX7O00628 323 aa7.76□□□□□ -1.17
ATG4B-219ENST00000479941 PAGE4O60829 102 aa7.76□□□□□ -1.17
ATG4B-219ENST00000479941 PRM2P04554 102 aa7.76□□□□□ -1.17
ATG4B-219ENST00000479941 AZU1P20160 251 aa7.76□□□□□ -1.17
ATG4B-219ENST00000479941 NANOS2P60321 138 aaKnown RBP7.76□□□□□ -1.17
ATG4B-219ENST00000479941 FLI1Q01543 452 aaPredicted RBP7.76□□□□□ -1.17
ATG4B-219ENST00000479941 PMS2P11Q13670 270 aa7.76□□□□□ -1.17
ATG4B-219ENST00000479941 PRR9Q5T870 116 aa7.76□□□□□ -1.17
ATG4B-219ENST00000479941 Q6AWC8 147 aa7.76□□□□□ -1.17
ATG4B-219ENST00000479941 TMEM263Q8WUH6 116 aaKnown RBP7.76□□□□□ -1.17
ATG4B-219ENST00000479941 SGK494Q96LW2 274 aa7.76□□□□□ -1.17
ATG4B-219ENST00000479941 TREM1Q9NP99 234 aa7.76□□□□□ -1.17
ATG4B-219ENST00000479941 MANBALQ9NQG1 85 aa7.76□□□□□ -1.17
ATG4B-219ENST00000479941 DKK2Q9UBU2 259 aa7.76□□□□□ -1.17
ATG4B-219ENST00000479941 CELA1Q9UNI1 258 aa7.76□□□□□ -1.17
ATG4B-219ENST00000479941 DNAH1Q9P2D7 4330 aa7.75□□□□□ -1.17
ATG4B-219ENST00000479941 NUPR2A6NF83 97 aa7.75□□□□□ -1.17
ATG4B-219ENST00000479941 LYRM9A8MSI8 78 aa7.75□□□□□ -1.17
ATG4B-219ENST00000479941 C11orf94C9JXX5 98 aa7.75□□□□□ -1.17
ATG4B-219ENST00000479941 IGLV2-11P01706 119 aa7.75□□□□□ -1.17
ATG4B-219ENST00000479941 ANXA2RQ3ZCQ2 193 aa7.75□□□□□ -1.17
ATG4B-219ENST00000479941 SAPCD1Q5SSQ6 148 aa7.75□□□□□ -1.17
ATG4B-219ENST00000479941 FAM222AQ5U5X8 452 aa7.75□□□□□ -1.17
ATG4B-219ENST00000479941 ALKAL2Q6UX46 152 aa7.75□□□□□ -1.17
ATG4B-219ENST00000479941 EIF4E3Q8N5X7 224 aaKnown RBP7.75□□□□□ -1.17
ATG4B-219ENST00000479941 RNASE8Q8TDE3 154 aaKnown RBP7.75□□□□□ -1.17
ATG4B-219ENST00000479941 PHLDA1Q8WV24 401 aaPredicted RBP7.75□□□□□ -1.17
ATG4B-219ENST00000479941 BOLA1Q9Y3E2 137 aa7.75□□□□□ -1.17
ATG4B-219ENST00000479941 LYSTQ99698 3801 aa7.75□□□□□ -1.17
ATG4B-219ENST00000479941 RYR3Q15413 4870 aa7.74□□□□□ -1.17
ATG4B-219ENST00000479941 IGHV1OR15-1A0A075B7D0 117 aa7.74□□□□□ -1.17
ATG4B-219ENST00000479941 PLAC8L1A1L4L8 177 aa7.74□□□□□ -1.17
ATG4B-219ENST00000479941 RGS13O14921 159 aa7.74□□□□□ -1.17
ATG4B-219ENST00000479941 ATP5G3P48201 142 aa7.74□□□□□ -1.17
ATG4B-219ENST00000479941 BLOC1S1P78537 153 aa7.74□□□□□ -1.17
ATG4B-219ENST00000479941 CCL20P78556 96 aa7.74□□□□□ -1.17
ATG4B-219ENST00000479941 C12orf74Q32Q52 190 aa7.74□□□□□ -1.17
ATG4B-219ENST00000479941 CEMP1Q6PRD7 247 aaPredicted RBP7.74□□□□□ -1.17
ATG4B-219ENST00000479941 Q6ZTC4 211 aa7.74□□□□□ -1.17
ATG4B-219ENST00000479941 PRNTQ86SH4 94 aa7.74□□□□□ -1.17
ATG4B-219ENST00000479941 ZNF680Q8NEM1 530 aa7.74□□□□□ -1.17
ATG4B-219ENST00000479941 TVP23CQ96ET8 276 aa7.74□□□□□ -1.17
ATG4B-219ENST00000479941 FMC1Q96HJ9 113 aa7.74□□□□□ -1.17
ATG4B-219ENST00000479941 LINC00479Q96M42 142 aa7.74□□□□□ -1.17
ATG4B-219ENST00000479941 TXNDC17Q9BRA2 123 aa7.74□□□□□ -1.17
ATG4B-219ENST00000479941 TIMM8BQ9Y5J9 83 aaPredicted RBP7.74□□□□□ -1.17
ATG4B-219ENST00000479941 RYR2Q92736 4967 aa7.73□□□□□ -1.17
ATG4B-219ENST00000479941 TRAV10A0A0B4J240 114 aa7.73□□□□□ -1.17
ATG4B-219ENST00000479941 TRAV21A0A0B4J279 112 aa7.73□□□□□ -1.17
ATG4B-219ENST00000479941 CBY3A6NI87 242 aa7.73□□□□□ -1.17
ATG4B-219ENST00000479941 SNURFLB1AK76 121 aa7.73□□□□□ -1.17
ATG4B-219ENST00000479941 IFNA1P01562 189 aa7.73□□□□□ -1.17
ATG4B-219ENST00000479941 UBE2G1P62253 170 aa7.73□□□□□ -1.17
ATG4B-219ENST00000479941 SMUG1Q53HV7 270 aa7.73□□□□□ -1.17
ATG4B-219ENST00000479941 FAM159AQ6UWV7 190 aa7.73□□□□□ -1.17
ATG4B-219ENST00000479941 GNG13Q9P2W3 67 aa7.73□□□□□ -1.17
ATG4B-219ENST00000479941 KLK5Q9Y337 293 aaPredicted RBP7.73□□□□□ -1.17
ATG4B-219ENST00000479941 KLF12Q9Y4X4 402 aa7.73□□□□□ -1.17
ATG4B-219ENST00000479941 TRAV34A0A0B4J273 112 aa7.72□□□□□ -1.17
ATG4B-219ENST00000479941 TRBV6-1A0A0K0K1D8 114 aa7.72□□□□□ -1.17
ATG4B-219ENST00000479941 GCGP01275 180 aa7.72□□□□□ -1.17
ATG4B-219ENST00000479941 S100A9P06702 114 aaKnown RBP7.72□□□□□ -1.17
ATG4B-219ENST00000479941 TAGLN2P37802 199 aaKnown RBP7.72□□□□□ -1.17
ATG4B-219ENST00000479941 AKR1C3P42330 323 aa7.72□□□□□ -1.17
ATG4B-219ENST00000479941 DAD1P61803 113 aa7.72□□□□□ -1.17
ATG4B-219ENST00000479941 TMEM183BQ1AE95 376 aa7.72□□□□□ -1.17
ATG4B-219ENST00000479941 TDRG1Q3Y452 100 aa7.72□□□□□ -1.17
ATG4B-219ENST00000479941 IBA57Q5T440 356 aaKnown RBP7.72□□□□□ -1.17
ATG4B-219ENST00000479941 Q6ZQT7 251 aa7.72□□□□□ -1.17
ATG4B-219ENST00000479941 Q86TA4 180 aa7.72□□□□□ -1.17
ATG4B-219ENST00000479941 C8orf49Q96NF6 230 aa7.72□□□□□ -1.17
ATG4B-219ENST00000479941 ZFP30Q9Y2G7 519 aa7.72□□□□□ -1.17
ATG4B-219ENST00000479941 VPS13DQ5THJ4 4388 aa7.71□□□□□ -1.18
ATG4B-219ENST00000479941 ALMS1Q8TCU4 4167 aa7.71□□□□□ -1.18
ATG4B-219ENST00000479941 PFN1P07737 140 aaKnown RBP7.71□□□□□ -1.18
ATG4B-219ENST00000479941 MEF2BQ02080 365 aaPredicted RBP7.71□□□□□ -1.18
ATG4B-219ENST00000479941 DAZ2Q13117 558 aaKnown RBP7.71□□□□□ -1.18
ATG4B-219ENST00000479941 MUC21Q5SSG8 566 aa7.71□□□□□ -1.18
ATG4B-219ENST00000479941 ZNF767PQ75MW2 155 aa7.71□□□□□ -1.18
ATG4B-219ENST00000479941 COX8CQ7Z4L0 72 aa7.71□□□□□ -1.18
ATG4B-219ENST00000479941 C11orf72Q8NBR9 251 aa7.71□□□□□ -1.18
ATG4B-219ENST00000479941 C2CD4CQ8TF44 421 aa7.71□□□□□ -1.18
ATG4B-219ENST00000479941 KCNS1Q96KK3 526 aa7.71□□□□□ -1.18
ATG4B-219ENST00000479941 NOP10Q9NPE3 64 aaKnown RBP7.71□□□□□ -1.18
ATG4B-219ENST00000479941 TRGV11A0A075B6L2 103 aa7.7□□□□□ -1.18
ATG4B-219ENST00000479941 DEFB131BA0A096LNP1 70 aa7.7□□□□□ -1.18
ATG4B-219ENST00000479941 SCO2A0A1W2PP80 73 aa7.7□□□□□ -1.18
ATG4B-219ENST00000479941 LTAP01374 205 aa7.7□□□□□ -1.18
ATG4B-219ENST00000479941 DEFB130BP0DP73 79 aa7.7□□□□□ -1.18
ATG4B-219ENST00000479941 DEFB130AP0DP74 79 aa7.7□□□□□ -1.18
ATG4B-219ENST00000479941 BCL2P10415 239 aa7.7□□□□□ -1.18
ATG4B-219ENST00000479941 ZNF80P51504 273 aaPredicted RBP7.7□□□□□ -1.18
ATG4B-219ENST00000479941 TCL1AP56279 114 aa7.7□□□□□ -1.18
ATG4B-219ENST00000479941 LYPD6BQ8NI32 183 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms