RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 ZC2HC1AQ96GY0 325 aa0.92□□□□□ -2.26
NPHP3-207ENST00000476742 LINC00052Q96N35 136 aa0.92□□□□□ -2.26
NPHP3-207ENST00000476742 MGST2Q99735 147 aa0.92□□□□□ -2.26
NPHP3-207ENST00000476742 SLC35B3Q9H1N7 401 aa0.92□□□□□ -2.26
NPHP3-207ENST00000476742 TMEM242Q9NWH2 141 aa0.92□□□□□ -2.26
NPHP3-207ENST00000476742 TIMM9Q9Y5J7 89 aa0.92□□□□□ -2.26
NPHP3-207ENST00000476742 LY96Q9Y6Y9 160 aa0.92□□□□□ -2.26
NPHP3-207ENST00000476742 AKAP12Q02952 1782 aa0.92□□□□□ -2.26
NPHP3-207ENST00000476742 RALGAPA2Q2PPJ7 1873 aa0.92□□□□□ -2.26
NPHP3-207ENST00000476742 MED14O60244 1454 aa0.92□□□□□ -2.26
NPHP3-207ENST00000476742 CCDC141Q6ZP82 1450 aa0.92□□□□□ -2.26
NPHP3-207ENST00000476742 TEX14Q8IWB6 1497 aa0.92□□□□□ -2.26
NPHP3-207ENST00000476742 MPDZO75970 2070 aa0.92□□□□□ -2.26
NPHP3-207ENST00000476742 ANAPC1Q9H1A4 1944 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 RTEL1-TNFRSF6BF6WH68 1400 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 CRB1P82279 1406 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 TROQ12816 1431 aaPredicted RBP0.91□□□□□ -2.26
NPHP3-207ENST00000476742 ADAMTSL1Q8N6G6 1762 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 KDM5DQ9BY66 1539 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 TRGV5A0A0B4J1U4 118 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 IGHV3-73A0A0B4J1V6 119 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 IGKV1D-43A0A0B4J1Z2 117 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 IGHV1-24A0A0C4DH33 117 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 IGKV1-12A0A0C4DH73 117 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 A0A0D9SEW6 157 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 UBE2L5PA0A1B0GUS4 154 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 KANTRA0A1W2PQU2 76 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 C17orf112F2Z3M2 114 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 K7EP34 96 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 K7ERJ3 54 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 M0R2P5 195 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 OR1I1O60431 355 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 EDF1O60869 148 aaKnown RBP0.91□□□□□ -2.26
NPHP3-207ENST00000476742 PITX3O75364 302 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 PGLYRP1O75594 196 aaPredicted RBP0.91□□□□□ -2.26
NPHP3-207ENST00000476742 UBL3O95164 117 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 NPYP01303 97 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 IGKV1D-12P01611 117 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 CD3DP04234 171 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 IL5P05113 134 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 GYPBP06028 91 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 MSMBP08118 114 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 SAA1P0DJI8 122 aaPredicted RBP0.91□□□□□ -2.26
NPHP3-207ENST00000476742 IGHV3-30-3P0DP02 117 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 COX7CP15954 63 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 CBLN1P23435 193 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 PEBP1P30086 187 aaKnown RBP0.91□□□□□ -2.26
NPHP3-207ENST00000476742 FAUP35544 74 aaKnown RBP0.91□□□□□ -2.26
NPHP3-207ENST00000476742 ATP5EP56381 51 aaPredicted RBP0.91□□□□□ -2.26
NPHP3-207ENST00000476742 SEC11AP67812 179 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 UBE2L3P68036 154 aaKnown RBP0.91□□□□□ -2.26
NPHP3-207ENST00000476742 ASB16-AS1Q495Z4 193 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.91□□□□□ -2.26
NPHP3-207ENST00000476742 MIC13Q5XKP0 118 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 ATP11AUNQ6ZP68 121 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 C7orf65Q6ZTY9 151 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 SPATA12Q7Z6I5 190 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 C15orf53Q8NAA6 179 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 ATP6V0E2Q8NHE4 81 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 OTOSQ8NHW6 89 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 ZNF563Q8TA94 476 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 VSTM2AQ8TAG5 236 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 MYOZ3Q8TDC0 251 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 DIRC1Q969H9 104 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 MRPS24Q96EL2 167 aaKnown RBP0.91□□□□□ -2.26
NPHP3-207ENST00000476742 SMIM7Q9BQ49 75 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 PMCHL2Q9BQD1 86 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 LINC00467Q9BRT7 94 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 CST11Q9H112 138 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 ST20Q9HBF5 79 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 BCL2L10Q9HD36 194 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 NDUFB11Q9NX14 153 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 TP73-AS1Q9UF72 201 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 KLK5Q9Y337 293 aaPredicted RBP0.91□□□□□ -2.26
NPHP3-207ENST00000476742 DNAJC15Q9Y5T4 150 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 KIAA1551Q9HCM1 1747 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 PHIPQ8WWQ0 1821 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 PXDNLA1KZ92 1463 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 NEO1Q92859 1461 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 DICER1Q9UPY3 1922 aaKnown RBP0.91□□□□□ -2.26
NPHP3-207ENST00000476742 SYNJ1O43426 1573 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 CR1P17927 2039 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 HECW2Q9P2P5 1572 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 THSD7AQ9UPZ6 1657 aa0.91□□□□□ -2.26
NPHP3-207ENST00000476742 PRRC2BQ5JSZ5 2229 aaKnown RBP0.91□□□□□ -2.26
NPHP3-207ENST00000476742 FER1L6Q2WGJ9 1857 aa0.9□□□□□ -2.26
NPHP3-207ENST00000476742 EML6Q6ZMW3 1958 aa0.9□□□□□ -2.26
NPHP3-207ENST00000476742 TNRC6AQ8NDV7 1962 aaKnown RBP0.9□□□□□ -2.26
NPHP3-207ENST00000476742 DSCAML1Q8TD84 2053 aa0.9□□□□□ -2.26
NPHP3-207ENST00000476742 ZFYVE16Q7Z3T8 1539 aa0.9□□□□□ -2.26
NPHP3-207ENST00000476742 FOCADQ5VW36 1801 aa0.9□□□□□ -2.27
NPHP3-207ENST00000476742 WNK3Q9BYP7 1800 aa0.9□□□□□ -2.27
NPHP3-207ENST00000476742 MYH7BA7E2Y1 1941 aa0.9□□□□□ -2.27
NPHP3-207ENST00000476742 MYH6P13533 1939 aa0.9□□□□□ -2.27
NPHP3-207ENST00000476742 CHD3Q12873 2000 aaKnown RBP0.9□□□□□ -2.27
NPHP3-207ENST00000476742 IGLV3-9A0A075B6K5 115 aa0.9□□□□□ -2.27
NPHP3-207ENST00000476742 A0A087WXM4 84 aa0.9□□□□□ -2.27
NPHP3-207ENST00000476742 IGKV1-9A0A0C4DH69 117 aa0.9□□□□□ -2.27
NPHP3-207ENST00000476742 LOC107984156A0A0G2JMH3 177 aa0.9□□□□□ -2.27
NPHP3-207ENST00000476742 A0A0G2JQZ4 141 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms