RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-208	ENST00000475997	CEP192	Q8TEP8	1941 aa		4.93	□□□□□ -1.62
HNRNPU-208	ENST00000475997	IGHG2	P01859	326 aa		4.93	□□□□□ -1.62
HNRNPU-208	ENST00000475997	ARMS2	P0C7Q2	107 aa		4.93	□□□□□ -1.62
HNRNPU-208	ENST00000475997	MDS2	Q8NDY4	140 aa		4.93	□□□□□ -1.62
HNRNPU-208	ENST00000475997	TRAV3	A0A0B4J244	114 aa		4.93	□□□□□ -1.62
HNRNPU-208	ENST00000475997	TRAV12-1	A0A0B4J245	112 aa		4.93	□□□□□ -1.62
HNRNPU-208	ENST00000475997	FAM236A	A0A1B0GUQ0	79 aa		4.93	□□□□□ -1.62
HNRNPU-208	ENST00000475997	FAM236B	A0A1B0GV22	79 aa		4.93	□□□□□ -1.62
HNRNPU-208	ENST00000475997		H3BQ85	93 aa		4.93	□□□□□ -1.62
HNRNPU-208	ENST00000475997	KRTAP27-1	Q3LI81	207 aa		4.93	□□□□□ -1.62
HNRNPU-208	ENST00000475997	CDPF1	Q6NVV7	123 aa		4.93	□□□□□ -1.62
HNRNPU-208	ENST00000475997	CHD3	Q12873	2000 aa	Known RBP	4.92	□□□□□ -1.62
HNRNPU-208	ENST00000475997	ARFGEF3	Q5TH69	2177 aa		4.92	□□□□□ -1.62
HNRNPU-208	ENST00000475997	OOSP1	A8MZH6	123 aa		4.92	□□□□□ -1.62
HNRNPU-208	ENST00000475997	SHISA9	B4DS77	424 aa		4.92	□□□□□ -1.62
HNRNPU-208	ENST00000475997	PSMB8	P28062	276 aa		4.92	□□□□□ -1.62
HNRNPU-208	ENST00000475997	PRR7	Q8TB68	274 aa		4.92	□□□□□ -1.62
HNRNPU-208	ENST00000475997	WFDC12	Q8WWY7	111 aa		4.92	□□□□□ -1.62
HNRNPU-208	ENST00000475997		J3QQQ9	107 aa		4.92	□□□□□ -1.62
HNRNPU-208	ENST00000475997		K7EMI3	77 aa		4.92	□□□□□ -1.62
HNRNPU-208	ENST00000475997	VDAC2	P45880	294 aa	Predicted RBP	4.92	□□□□□ -1.62
HNRNPU-208	ENST00000475997	ANXA2R	Q3ZCQ2	193 aa		4.92	□□□□□ -1.62
HNRNPU-208	ENST00000475997	CD177	Q8N6Q3	437 aa		4.92	□□□□□ -1.62
HNRNPU-208	ENST00000475997	PRSS29P	A6NIE9	313 aa		4.92	□□□□□ -1.62
HNRNPU-208	ENST00000475997	HAX1	O00165	279 aa		4.92	□□□□□ -1.62
HNRNPU-208	ENST00000475997	ZNF329	Q86UD4	541 aa		4.92	□□□□□ -1.62
HNRNPU-208	ENST00000475997	SZT2	Q5T011	3432 aa		4.92	□□□□□ -1.62
HNRNPU-208	ENST00000475997	C15orf62	A8K5M9	175 aa		4.92	□□□□□ -1.62
HNRNPU-208	ENST00000475997	SMKR1	H3BMG3	65 aa		4.92	□□□□□ -1.62
HNRNPU-208	ENST00000475997	TAX1BP3	O14907	124 aa		4.92	□□□□□ -1.62
HNRNPU-208	ENST00000475997	IGHV3-11	P01762	117 aa		4.92	□□□□□ -1.62
HNRNPU-208	ENST00000475997	ATP5J2	P56134	94 aa		4.92	□□□□□ -1.62
HNRNPU-208	ENST00000475997	FOXI2	Q6ZQN5	318 aa		4.92	□□□□□ -1.62
HNRNPU-208	ENST00000475997	TMEM75	Q8N9X5	138 aa		4.92	□□□□□ -1.62
HNRNPU-208	ENST00000475997	RNASE8	Q8TDE3	154 aa	Known RBP	4.92	□□□□□ -1.62
HNRNPU-208	ENST00000475997	hADV29S1	A0JD25	119 aa		4.91	□□□□□ -1.62
HNRNPU-208	ENST00000475997	TIMM23	O14925	209 aa		4.91	□□□□□ -1.62
HNRNPU-208	ENST00000475997	BAALC-AS2	P0C853	105 aa		4.91	□□□□□ -1.62
HNRNPU-208	ENST00000475997	PLA2G5	P39877	138 aa		4.91	□□□□□ -1.62
HNRNPU-208	ENST00000475997	WFDC9	Q8NEX5	89 aa		4.91	□□□□□ -1.62
HNRNPU-208	ENST00000475997	ATP6V0E2	Q8NHE4	81 aa		4.91	□□□□□ -1.62
HNRNPU-208	ENST00000475997	PRSS22	Q9GZN4	317 aa		4.91	□□□□□ -1.62
HNRNPU-208	ENST00000475997	MRPL35	Q9NZE8	188 aa	Known RBP	4.91	□□□□□ -1.62
HNRNPU-208	ENST00000475997	ORMDL1	Q9P0S3	153 aa		4.91	□□□□□ -1.62
HNRNPU-208	ENST00000475997	LAMA1	P25391	3075 aa		4.91	□□□□□ -1.62
HNRNPU-208	ENST00000475997	TRAV25	A0A0B4J276	109 aa		4.91	□□□□□ -1.62
HNRNPU-208	ENST00000475997	IGHV1-18	A0A0C4DH31	117 aa		4.91	□□□□□ -1.62
HNRNPU-208	ENST00000475997	C17orf100	A8MU93	164 aa		4.91	□□□□□ -1.62
HNRNPU-208	ENST00000475997	HERV-K104	P63124	156 aa		4.91	□□□□□ -1.62
HNRNPU-208	ENST00000475997	SRSF2	Q01130	221 aa	Known RBP	4.91	□□□□□ -1.62
HNRNPU-208	ENST00000475997	FAM27E3	Q08E93	113 aa		4.91	□□□□□ -1.62
HNRNPU-208	ENST00000475997	ZCCHC24	Q8N2G6	241 aa	Known RBP	4.91	□□□□□ -1.62
HNRNPU-208	ENST00000475997	C11orf1	Q9H5F2	150 aa		4.91	□□□□□ -1.62
HNRNPU-208	ENST00000475997	SCRT2	Q9NQ03	307 aa		4.91	□□□□□ -1.62
HNRNPU-208	ENST00000475997	MALRD1	Q5VYJ5	2156 aa		4.91	□□□□□ -1.62
HNRNPU-208	ENST00000475997		H0YGX0	51 aa		4.91	□□□□□ -1.62
HNRNPU-208	ENST00000475997	CPAMD8	Q8IZJ3	1885 aa		4.91	□□□□□ -1.62
HNRNPU-208	ENST00000475997	FAM240A	A0A1B0GVK7	77 aa		4.91	□□□□□ -1.62
HNRNPU-208	ENST00000475997	SRRM5	B3KS81	715 aa		4.91	□□□□□ -1.62
HNRNPU-208	ENST00000475997	KLF5	Q13887	457 aa	Predicted RBP	4.91	□□□□□ -1.62
HNRNPU-208	ENST00000475997	TINCR	A0A1B0GVN0	87 aa		4.9	□□□□□ -1.62
HNRNPU-208	ENST00000475997	IGLL5	B9A064	214 aa		4.9	□□□□□ -1.62
HNRNPU-208	ENST00000475997		I3L3M4	83 aa		4.9	□□□□□ -1.62
HNRNPU-208	ENST00000475997	IGLC1	P0CG04	106 aa		4.9	□□□□□ -1.62
HNRNPU-208	ENST00000475997	ZFP2	Q6ZN57	461 aa		4.9	□□□□□ -1.62
HNRNPU-208	ENST00000475997	ODF3L1	Q8IXM7	274 aa		4.9	□□□□□ -1.62
HNRNPU-208	ENST00000475997	PYGO2	Q9BRQ0	406 aa		4.9	□□□□□ -1.62
HNRNPU-208	ENST00000475997	TRGV1	A0A0A0MS02	117 aa		4.9	□□□□□ -1.62
HNRNPU-208	ENST00000475997		A0A1B0GUS0	222 aa		4.9	□□□□□ -1.62
HNRNPU-208	ENST00000475997	CHKB-CPT1B	H3BT56	60 aa		4.9	□□□□□ -1.62
HNRNPU-208	ENST00000475997	COX6B1	P14854	86 aa		4.9	□□□□□ -1.62
HNRNPU-208	ENST00000475997		Q6ZR03	302 aa		4.9	□□□□□ -1.62
HNRNPU-208	ENST00000475997	SMIM2	Q9BVW6	85 aa		4.9	□□□□□ -1.62
HNRNPU-208	ENST00000475997	TRBV7-1	A0A0A6YYK4	115 aa		4.9	□□□□□ -1.63
HNRNPU-208	ENST00000475997	SMIM27	A0A1W2PRY6	76 aa		4.9	□□□□□ -1.63
HNRNPU-208	ENST00000475997	PRSS47	A8MTI9	375 aa		4.9	□□□□□ -1.63
HNRNPU-208	ENST00000475997	CCL3L1	P16619	93 aa		4.9	□□□□□ -1.63
HNRNPU-208	ENST00000475997	LMO1	P25800	156 aa		4.9	□□□□□ -1.63
HNRNPU-208	ENST00000475997	FUS	P35637	526 aa	Known RBP eCLIP	4.9	□□□□□ -1.63	2e-6	■□□□□ 8.5
HNRNPU-208	ENST00000475997		Q6ZVH6	145 aa		4.9	□□□□□ -1.63
HNRNPU-208	ENST00000475997	C20orf78	Q9BR46	151 aa		4.9	□□□□□ -1.63
HNRNPU-208	ENST00000475997	IGKV1D-17	A0A075B6S4	117 aa		4.9	□□□□□ -1.63
HNRNPU-208	ENST00000475997		H3BT86	120 aa		4.9	□□□□□ -1.63
HNRNPU-208	ENST00000475997		K7ERJ3	54 aa		4.9	□□□□□ -1.63
HNRNPU-208	ENST00000475997	PRSS57	Q6UWY2	283 aa		4.9	□□□□□ -1.63
HNRNPU-208	ENST00000475997	SH2D6	Q7Z4S9	175 aa		4.9	□□□□□ -1.63
HNRNPU-208	ENST00000475997	SPACA3	Q8IXA5	215 aa		4.9	□□□□□ -1.63
HNRNPU-208	ENST00000475997	NKAPP1	Q8N9T2	125 aa		4.9	□□□□□ -1.63
HNRNPU-208	ENST00000475997	IGFBPL1	Q8WX77	278 aa		4.9	□□□□□ -1.63
HNRNPU-208	ENST00000475997	C11orf52	Q96A22	123 aa		4.9	□□□□□ -1.63
HNRNPU-208	ENST00000475997	SHANK2-AS3	Q9BTD1	123 aa		4.9	□□□□□ -1.63
HNRNPU-208	ENST00000475997		V9GYV3	84 aa		4.9	□□□□□ -1.63
HNRNPU-208	ENST00000475997	CFHR2	P36980	270 aa		4.89	□□□□□ -1.63
HNRNPU-208	ENST00000475997	HERVK_113	P63121	156 aa		4.89	□□□□□ -1.63
HNRNPU-208	ENST00000475997		Q8TAT8	98 aa		4.89	□□□□□ -1.63
HNRNPU-208	ENST00000475997	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	4.89	□□□□□ -1.63	4e-7	■■■■□ 25.9
HNRNPU-208	ENST00000475997	SAP30	O75446	220 aa		4.89	□□□□□ -1.63
HNRNPU-208	ENST00000475997	FOXI1	Q12951	378 aa		4.89	□□□□□ -1.63
HNRNPU-208	ENST00000475997	C15orf32	Q32M92	178 aa		4.89	□□□□□ -1.63
HNRNPU-208	ENST00000475997	MUSTN1	Q8IVN3	82 aa		4.89	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms