RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 TXNDC17Q9BRA2 123 aa10.78□□□□□ -0.68
VARS-223ENST00000474643 OTORQ9NRC9 128 aa10.78□□□□□ -0.68
VARS-223ENST00000474643 VPS13DQ5THJ4 4388 aa10.77□□□□□ -0.69
VARS-223ENST00000474643 ODF3Q96PU9 254 aa10.77□□□□□ -0.69
VARS-223ENST00000474643 ATG101Q9BSB4 218 aa10.77□□□□□ -0.69
VARS-223ENST00000474643 HECTD4Q9Y4D8 3996 aa10.77□□□□□ -0.69
VARS-223ENST00000474643 DNAH10Q8IVF4 4471 aa10.77□□□□□ -0.69
VARS-223ENST00000474643 NDUFS6O75380 124 aaKnown RBP10.76□□□□□ -0.69
VARS-223ENST00000474643 DEFB130BP0DP73 79 aa10.76□□□□□ -0.69
VARS-223ENST00000474643 DEFB130AP0DP74 79 aa10.76□□□□□ -0.69
VARS-223ENST00000474643 GFI1BQ5VTD9 330 aa10.76□□□□□ -0.69
VARS-223ENST00000474643 VGLL1Q99990 258 aa10.76□□□□□ -0.69
VARS-223ENST00000474643 AGPAT4-IT1Q9H0P7 198 aa10.76□□□□□ -0.69
VARS-223ENST00000474643 MANBALQ9NQG1 85 aa10.76□□□□□ -0.69
VARS-223ENST00000474643 DNAH6Q9C0G6 4158 aa10.75□□□□□ -0.69
VARS-223ENST00000474643 IGLV2-18A0A075B6J9 118 aa10.75□□□□□ -0.69
VARS-223ENST00000474643 TRAV12-3A0A0B4J271 114 aa10.75□□□□□ -0.69
VARS-223ENST00000474643 SERTM2A0A1B0GWG4 89 aa10.75□□□□□ -0.69
VARS-223ENST00000474643 LYRM9A8MSI8 78 aa10.75□□□□□ -0.69
VARS-223ENST00000474643 H7BYZ3 331 aa10.75□□□□□ -0.69
VARS-223ENST00000474643 SLC25A5P05141 298 aaKnown RBP10.75□□□□□ -0.69
VARS-223ENST00000474643 GPX1P07203 203 aa10.75□□□□□ -0.69
VARS-223ENST00000474643 TAS2R60P59551 318 aa10.75□□□□□ -0.69
VARS-223ENST00000474643 KIR3DS1Q14943 382 aa10.75□□□□□ -0.69
VARS-223ENST00000474643 SOHLH1Q5JUK2 328 aa10.75□□□□□ -0.69
VARS-223ENST00000474643 TMEM88Q6PEY1 159 aa10.75□□□□□ -0.69
VARS-223ENST00000474643 C9orf47Q6ZRZ4 202 aa10.75□□□□□ -0.69
VARS-223ENST00000474643 CCDC28AQ8IWP9 274 aa10.75□□□□□ -0.69
VARS-223ENST00000474643 C20orf144Q9BQM9 153 aa10.75□□□□□ -0.69
VARS-223ENST00000474643 RBAKDNA6NC62 111 aa10.74□□□□□ -0.69
VARS-223ENST00000474643 DIRC3C9JPN6 131 aa10.74□□□□□ -0.69
VARS-223ENST00000474643 RGS13O14921 159 aa10.74□□□□□ -0.69
VARS-223ENST00000474643 IFNA1P01562 189 aa10.74□□□□□ -0.69
VARS-223ENST00000474643 PRM2P04554 102 aa10.74□□□□□ -0.69
VARS-223ENST00000474643 RNASE4P34096 147 aaKnown RBP10.74□□□□□ -0.69
VARS-223ENST00000474643 ZNF138P52744 262 aa10.74□□□□□ -0.69
VARS-223ENST00000474643 FGF8P55075 233 aaPredicted RBP10.74□□□□□ -0.69
VARS-223ENST00000474643 RAB14P61106 215 aa10.74□□□□□ -0.69
VARS-223ENST00000474643 C7orf71A4D174 169 aa10.73□□□□□ -0.69
VARS-223ENST00000474643 FAM74A7A6NL05 159 aa10.73□□□□□ -0.69
VARS-223ENST00000474643 F5H768 121 aa10.73□□□□□ -0.69
VARS-223ENST00000474643 IFITM2Q01629 132 aa10.73□□□□□ -0.69
VARS-223ENST00000474643 BTN1A1Q13410 526 aa10.73□□□□□ -0.69
VARS-223ENST00000474643 GOLT1AQ6ZVE7 132 aa10.73□□□□□ -0.69
VARS-223ENST00000474643 C15orf53Q8NAA6 179 aa10.73□□□□□ -0.69
VARS-223ENST00000474643 C5orf17Q8NAS9 161 aa10.73□□□□□ -0.69
VARS-223ENST00000474643 Q8TAT8 98 aa10.73□□□□□ -0.69
VARS-223ENST00000474643 C16orf74Q96GX8 76 aa10.73□□□□□ -0.69
VARS-223ENST00000474643 ZNF492Q9P255 531 aa10.73□□□□□ -0.69
VARS-223ENST00000474643 FBLL1A6NHQ2 334 aaKnown RBP10.72□□□□□ -0.69
VARS-223ENST00000474643 PRSS29PA6NIE9 313 aa10.72□□□□□ -0.69
VARS-223ENST00000474643 K7EQM0 130 aa10.72□□□□□ -0.69
VARS-223ENST00000474643 NMBP08949 121 aa10.72□□□□□ -0.69
VARS-223ENST00000474643 AZU1P20160 251 aa10.72□□□□□ -0.69
VARS-223ENST00000474643 GNG5P63218 68 aa10.72□□□□□ -0.69
VARS-223ENST00000474643 CLLU1Q5K131 121 aa10.72□□□□□ -0.69
VARS-223ENST00000474643 TMPRSS5Q9H3S3 457 aa10.72□□□□□ -0.69
VARS-223ENST00000474643 NUDT3O95989 172 aa10.71□□□□□ -0.69
VARS-223ENST00000474643 CRISP2P16562 243 aa10.71□□□□□ -0.69
VARS-223ENST00000474643 UBE2G2P60604 165 aa10.71□□□□□ -0.69
VARS-223ENST00000474643 SUMO1P63165 101 aaKnown RBP10.71□□□□□ -0.69
VARS-223ENST00000474643 RNF212Q495C1 297 aa10.71□□□□□ -0.69
VARS-223ENST00000474643 HIST1H2BAQ96A08 127 aa10.71□□□□□ -0.69
VARS-223ENST00000474643 TRBV7-9A0A0J9YWB2 115 aa10.7□□□□□ -0.7
VARS-223ENST00000474643 GGTLC3B5MD39 225 aa10.7□□□□□ -0.7
VARS-223ENST00000474643 F6UZH7 168 aa10.7□□□□□ -0.7
VARS-223ENST00000474643 ATP5G1P05496 136 aa10.7□□□□□ -0.7
VARS-223ENST00000474643 ATP5G3P48201 142 aa10.7□□□□□ -0.7
VARS-223ENST00000474643 CCL20P78556 96 aa10.7□□□□□ -0.7
VARS-223ENST00000474643 LGALS9BQ3B8N2 356 aa10.7□□□□□ -0.7
VARS-223ENST00000474643 ZNF493Q6ZR52 646 aa10.7□□□□□ -0.7
VARS-223ENST00000474643 TMEM263Q8WUH6 116 aaKnown RBP10.7□□□□□ -0.7
VARS-223ENST00000474643 FAM19A4Q96LR4 140 aa10.7□□□□□ -0.7
VARS-223ENST00000474643 PYGO2Q9BRQ0 406 aa10.7□□□□□ -0.7
VARS-223ENST00000474643 SMDT1Q9H4I9 107 aa10.7□□□□□ -0.7
VARS-223ENST00000474643 VAX2Q9UIW0 290 aa10.7□□□□□ -0.7
VARS-223ENST00000474643 EPDR1Q9UM22 224 aa10.7□□□□□ -0.7
VARS-223ENST00000474643 TIMM8BQ9Y5J9 83 aaPredicted RBP10.7□□□□□ -0.7
VARS-223ENST00000474643 CBY3A6NI87 242 aa10.69□□□□□ -0.7
VARS-223ENST00000474643 SNURFLB1AK76 121 aa10.69□□□□□ -0.7
VARS-223ENST00000474643 KLLNB2CW77 178 aa10.69□□□□□ -0.7
VARS-223ENST00000474643 PDE6DO43924 150 aa10.69□□□□□ -0.7
VARS-223ENST00000474643 PAGE4O60829 102 aa10.69□□□□□ -0.7
VARS-223ENST00000474643 BCL2P10415 239 aa10.69□□□□□ -0.7
VARS-223ENST00000474643 NDFIP1Q9BT67 221 aa10.69□□□□□ -0.7
VARS-223ENST00000474643 GNG13Q9P2W3 67 aa10.69□□□□□ -0.7
VARS-223ENST00000474643 LENEPQ9Y5L5 61 aa10.69□□□□□ -0.7
VARS-223ENST00000474643 A0A1B0GV50 99 aa10.68□□□□□ -0.7
VARS-223ENST00000474643 S100A9P06702 114 aaKnown RBP10.68□□□□□ -0.7
VARS-223ENST00000474643 MEF2BQ02080 365 aaPredicted RBP10.68□□□□□ -0.7
VARS-223ENST00000474643 CST9LP1Q5W188 147 aa10.68□□□□□ -0.7
VARS-223ENST00000474643 ZFAND2AQ8N6M9 145 aa10.68□□□□□ -0.7
VARS-223ENST00000474643 SGK494Q96LW2 274 aa10.68□□□□□ -0.7
VARS-223ENST00000474643 FAM210AQ96ND0 272 aa10.68□□□□□ -0.7
VARS-223ENST00000474643 NOP10Q9NPE3 64 aaKnown RBP10.68□□□□□ -0.7
VARS-223ENST00000474643 TRAV8-1A0A0A6YYK1 113 aa10.67□□□□□ -0.7
VARS-223ENST00000474643 RBFOX3A6NFN3 312 aa10.67□□□□□ -0.7
VARS-223ENST00000474643 TCRAP04437 139 aa10.67□□□□□ -0.7
VARS-223ENST00000474643 PRR9Q5T870 116 aa10.67□□□□□ -0.7
VARS-223ENST00000474643 C1orf134Q5TEV5 83 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms