RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 GPR179Q6PRD1 2367 aa5.62□□□□□ -1.51
USP48-206ENST00000464577 SPAARA0A1B0GVQ0 90 aa5.62□□□□□ -1.51
USP48-206ENST00000464577 K7EMI3 77 aa5.62□□□□□ -1.51
USP48-206ENST00000464577 ORMDL2Q53FV1 153 aa5.62□□□□□ -1.51
USP48-206ENST00000464577 MORN3Q6PF18 240 aaPredicted RBP5.62□□□□□ -1.51
USP48-206ENST00000464577 LCNL1Q6ZST4 164 aa5.62□□□□□ -1.51
USP48-206ENST00000464577 Q8N6K4 173 aa5.62□□□□□ -1.51
USP48-206ENST00000464577 SMIM2Q9BVW6 85 aa5.62□□□□□ -1.51
USP48-206ENST00000464577 C11orf21Q9P2W6 132 aa5.62□□□□□ -1.51
USP48-206ENST00000464577 ICE1Q9Y2F5 2266 aa5.61□□□□□ -1.51
USP48-206ENST00000464577 OOSP1A8MZH6 123 aa5.61□□□□□ -1.51
USP48-206ENST00000464577 M0R1W7 72 aa5.61□□□□□ -1.51
USP48-206ENST00000464577 PPIFP30405 207 aaKnown RBP5.61□□□□□ -1.51
USP48-206ENST00000464577 AMTNQ6UX39 209 aa5.61□□□□□ -1.51
USP48-206ENST00000464577 C1QTNF4Q9BXJ3 329 aa5.61□□□□□ -1.51
USP48-206ENST00000464577 AGPAT4-IT1Q9H0P7 198 aa5.61□□□□□ -1.51
USP48-206ENST00000464577 ZFAND3Q9H8U3 227 aa5.61□□□□□ -1.51
USP48-206ENST00000464577 HOXA3O43365 443 aaPredicted RBP5.6□□□□□ -1.51
USP48-206ENST00000464577 BUB3O43684 328 aa5.6□□□□□ -1.51
USP48-206ENST00000464577 APOMO95445 188 aa5.6□□□□□ -1.51
USP48-206ENST00000464577 IGHV3-23P01764 117 aa5.6□□□□□ -1.51
USP48-206ENST00000464577 CD3EP07766 207 aa5.6□□□□□ -1.51
USP48-206ENST00000464577 LGALS1P09382 135 aaKnown RBP5.6□□□□□ -1.51
USP48-206ENST00000464577 EFNA4P52798 201 aa5.6□□□□□ -1.51
USP48-206ENST00000464577 EBI3Q14213 229 aa5.6□□□□□ -1.51
USP48-206ENST00000464577 HES1Q14469 280 aa5.6□□□□□ -1.51
USP48-206ENST00000464577 CFAP126Q5VTH2 177 aa5.6□□□□□ -1.51
USP48-206ENST00000464577 NEXN-AS1Q8NBZ9 246 aa5.6□□□□□ -1.51
USP48-206ENST00000464577 DLX4Q92988 240 aaPredicted RBP5.6□□□□□ -1.51
USP48-206ENST00000464577 TOMM6Q96B49 74 aa5.6□□□□□ -1.51
USP48-206ENST00000464577 CELSR3Q9NYQ7 3312 aa5.6□□□□□ -1.51
USP48-206ENST00000464577 TRIOBPQ9H2D6 2365 aa5.6□□□□□ -1.51
USP48-206ENST00000464577 LYNX1G3V0Z9 82 aa5.6□□□□□ -1.51
USP48-206ENST00000464577 LYNX1P0DP58 116 aa5.6□□□□□ -1.51
USP48-206ENST00000464577 PRTN3P24158 256 aa5.6□□□□□ -1.51
USP48-206ENST00000464577 CKS1BP61024 79 aa5.6□□□□□ -1.51
USP48-206ENST00000464577 FOXI1Q12951 378 aa5.6□□□□□ -1.51
USP48-206ENST00000464577 KLRD1Q13241 179 aa5.6□□□□□ -1.51
USP48-206ENST00000464577 TMEM78Q5T7P6 136 aa5.6□□□□□ -1.51
USP48-206ENST00000464577 C9orf47Q6ZRZ4 202 aa5.6□□□□□ -1.51
USP48-206ENST00000464577 MTURNQ8N3F0 131 aa5.6□□□□□ -1.51
USP48-206ENST00000464577 SCGB3A1Q96QR1 104 aa5.6□□□□□ -1.51
USP48-206ENST00000464577 C20orf78Q9BR46 151 aa5.6□□□□□ -1.51
USP48-206ENST00000464577 UFC1Q9Y3C8 167 aa5.6□□□□□ -1.51
USP48-206ENST00000464577 TRAV8-2A0A0B4J237 113 aa5.59□□□□□ -1.51
USP48-206ENST00000464577 TRAV26-2A0A0B4J265 109 aa5.59□□□□□ -1.51
USP48-206ENST00000464577 CENPVL3A0A0U1RRI6 287 aa5.59□□□□□ -1.51
USP48-206ENST00000464577 UBE2D1P51668 147 aa5.59□□□□□ -1.51
USP48-206ENST00000464577 FOXC1Q12948 553 aa5.59□□□□□ -1.51
USP48-206ENST00000464577 LYRM7Q5U5X0 104 aa5.59□□□□□ -1.51
USP48-206ENST00000464577 SPANXN1Q5VSR9 72 aa5.59□□□□□ -1.51
USP48-206ENST00000464577 RNF182Q8N6D2 247 aa5.59□□□□□ -1.51
USP48-206ENST00000464577 FAM110DQ8TAY7 271 aaPredicted RBP5.59□□□□□ -1.51
USP48-206ENST00000464577 MRPL16Q9NX20 251 aaKnown RBP5.59□□□□□ -1.51
USP48-206ENST00000464577 PGPEP1Q9NXJ5 209 aa5.59□□□□□ -1.51
USP48-206ENST00000464577 RAXQ9Y2V3 346 aa5.59□□□□□ -1.51
USP48-206ENST00000464577 SVILO95425 2214 aa5.59□□□□□ -1.51
USP48-206ENST00000464577 IGHV7-81A0A0B4J1V7 117 aa5.59□□□□□ -1.52
USP48-206ENST00000464577 M0R381 172 aa5.59□□□□□ -1.52
USP48-206ENST00000464577 INSL3P51460 131 aa5.59□□□□□ -1.52
USP48-206ENST00000464577 C8orf86Q6ZUL3 223 aa5.59□□□□□ -1.52
USP48-206ENST00000464577 ZGRF1Q86YA3 2104 aa5.59□□□□□ -1.52
USP48-206ENST00000464577 PRADC1Q9BSG0 188 aa5.59□□□□□ -1.52
USP48-206ENST00000464577 VCX2Q9H322 139 aa5.59□□□□□ -1.52
USP48-206ENST00000464577 CYSLTR1Q9Y271 337 aa5.59□□□□□ -1.52
USP48-206ENST00000464577 LENEPQ9Y5L5 61 aa5.59□□□□□ -1.52
USP48-206ENST00000464577 DSPP15924 2871 aaKnown RBP5.58□□□□□ -1.52
USP48-206ENST00000464577 DMDP11532 3685 aa5.58□□□□□ -1.52
USP48-206ENST00000464577 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.58□□□□□ -1.52
USP48-206ENST00000464577 CLPSL1A2RUU4 121 aa5.58□□□□□ -1.52
USP48-206ENST00000464577 COX6B1P14854 86 aa5.58□□□□□ -1.52
USP48-206ENST00000464577 SMCPP49901 116 aaPredicted RBP5.58□□□□□ -1.52
USP48-206ENST00000464577 UBE2D3P61077 147 aa5.58□□□□□ -1.52
USP48-206ENST00000464577 SUMO2P61956 95 aaKnown RBP5.58□□□□□ -1.52
USP48-206ENST00000464577 UBE2D2P62837 147 aa5.58□□□□□ -1.52
USP48-206ENST00000464577 MINOS1Q5TGZ0 78 aa5.58□□□□□ -1.52
USP48-206ENST00000464577 ZNF418Q8TF45 676 aaPredicted RBP5.58□□□□□ -1.52
USP48-206ENST00000464577 CDIP1Q9H305 208 aa5.58□□□□□ -1.52
USP48-206ENST00000464577 MINOS1-NBL1R4GNA1 71 aa5.58□□□□□ -1.52
USP48-206ENST00000464577 MED14OSP0DP75 135 aa5.57□□□□□ -1.52
USP48-206ENST00000464577 ATP5G2Q06055 141 aa5.57□□□□□ -1.52
USP48-206ENST00000464577 SCGB2A2Q13296 93 aa5.57□□□□□ -1.52
USP48-206ENST00000464577 C1orf122Q6ZSJ8 110 aa5.57□□□□□ -1.52
USP48-206ENST00000464577 VMO1Q7Z5L0 202 aa5.57□□□□□ -1.52
USP48-206ENST00000464577 BAALCQ8WXS3 180 aa5.57□□□□□ -1.52
USP48-206ENST00000464577 U3KQE9 123 aa5.57□□□□□ -1.52
USP48-206ENST00000464577 ABCA1O95477 2261 aa5.57□□□□□ -1.52
USP48-206ENST00000464577 IGHV3OR16-8A0A075B7F1 116 aa5.57□□□□□ -1.52
USP48-206ENST00000464577 LINC01549A6NIU2 74 aa5.57□□□□□ -1.52
USP48-206ENST00000464577 ZNF815PA8K554 130 aa5.57□□□□□ -1.52
USP48-206ENST00000464577 H3BVH4 76 aa5.57□□□□□ -1.52
USP48-206ENST00000464577 TSPAN13O95857 204 aa5.57□□□□□ -1.52
USP48-206ENST00000464577 PPP1R17O96001 155 aa5.57□□□□□ -1.52
USP48-206ENST00000464577 CRYBA4P53673 196 aa5.57□□□□□ -1.52
USP48-206ENST00000464577 C15orf32Q32M92 178 aa5.57□□□□□ -1.52
USP48-206ENST00000464577 SBSPONQ8IVN8 264 aa5.57□□□□□ -1.52
USP48-206ENST00000464577 SYT8Q8NBV8 401 aa5.57□□□□□ -1.52
USP48-206ENST00000464577 PPDPFLQ8WWR9 84 aa5.57□□□□□ -1.52
USP48-206ENST00000464577 RASL10AQ92737 203 aa5.57□□□□□ -1.52
USP48-206ENST00000464577 TIMD4Q96H15 378 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms