RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 ZNF705BP0CI00 300 aaPredicted RBP2.62□□□□□ -1.99
SCFD1-204ENST00000463622 NPPCP23582 126 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 UBE2G2P60604 165 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 UBE2L3P68036 154 aaKnown RBP2.62□□□□□ -1.99
SCFD1-204ENST00000463622 SERF2P84101 59 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 RAB31Q13636 194 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 FAM106AQ4KMX7 169 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 GDF5OSQ5U4N7 250 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 KRTAP5-1Q6L8H4 278 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 SIGLEC15Q6ZMC9 328 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 OR1L4Q8NGR5 311 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 LYPD6BQ8NI32 183 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 DCANP1Q8TF63 244 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 SFT2D1Q8WV19 159 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 BLNKQ8WV28 456 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 METTL26Q96S19 204 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 RARRES2Q99969 163 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 HRH4Q9H3N8 390 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 TMEM231Q9H6L2 316 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 UFC1Q9Y3C8 167 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 DYNC1H1Q14204 4646 aaKnown RBP2.61□□□□□ -1.99
SCFD1-204ENST00000463622 TRBV19A0A075B6N1 114 aa2.61□□□□□ -1.99
SCFD1-204ENST00000463622 A0A1B0GVY2 172 aa2.61□□□□□ -1.99
SCFD1-204ENST00000463622 K7EQG2 157 aa2.61□□□□□ -1.99
SCFD1-204ENST00000463622 PAGE4O60829 102 aa2.61□□□□□ -1.99
SCFD1-204ENST00000463622 RHOBP62745 196 aa2.61□□□□□ -1.99
SCFD1-204ENST00000463622 LGALS9CQ6DKI2 356 aa2.61□□□□□ -1.99
SCFD1-204ENST00000463622 CEMP1Q6PRD7 247 aaPredicted RBP2.61□□□□□ -1.99
SCFD1-204ENST00000463622 Q6ZQT7 251 aa2.61□□□□□ -1.99
SCFD1-204ENST00000463622 NOTCH2NLQ7Z3S9 236 aa2.61□□□□□ -1.99
SCFD1-204ENST00000463622 IQCF2Q8IXL9 164 aa2.61□□□□□ -1.99
SCFD1-204ENST00000463622 OR8I2Q8N0Y5 310 aa2.61□□□□□ -1.99
SCFD1-204ENST00000463622 STXBP6Q8NFX7 210 aa2.61□□□□□ -1.99
SCFD1-204ENST00000463622 SUN5Q8TC36 379 aa2.61□□□□□ -1.99
SCFD1-204ENST00000463622 SGK494Q96LW2 274 aa2.61□□□□□ -1.99
SCFD1-204ENST00000463622 PFDN5Q99471 154 aa2.61□□□□□ -1.99
SCFD1-204ENST00000463622 PAXXQ9BUH6 204 aa2.61□□□□□ -1.99
SCFD1-204ENST00000463622 MRPL32Q9BYC8 188 aaKnown RBP2.61□□□□□ -1.99
SCFD1-204ENST00000463622 ACTR3CQ9C0K3 210 aaPredicted RBP2.61□□□□□ -1.99
SCFD1-204ENST00000463622 MS4A6AQ9H2W1 248 aa2.61□□□□□ -1.99
SCFD1-204ENST00000463622 OR51M1Q9H341 326 aa2.61□□□□□ -1.99
SCFD1-204ENST00000463622 RETNQ9HD89 108 aa2.61□□□□□ -1.99
SCFD1-204ENST00000463622 UBQLN2Q9UHD9 624 aa2.61□□□□□ -1.99
SCFD1-204ENST00000463622 VPS13DQ5THJ4 4388 aa2.61□□□□□ -1.99
SCFD1-204ENST00000463622 IGKV2-40A0A087WW87 121 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-204ENST00000463622 A0A087X0K7 114 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 TRAV8-1A0A0A6YYK1 113 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 IGKV3D-20A0A0C4DH25 116 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 A0A1W2PPV4 95 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 FAM74A7A6NL05 159 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 KNCNA6PVL3 124 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 UMAD1C9J7I0 102 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 IGKV2D-40P01614 121 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-204ENST00000463622 FABP1P07148 127 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 NBEAP1P0C6P0 100 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 ZNF688P0C7X2 276 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 HIST1H1EP10412 219 aaKnown RBP2.6□□□□□ -1.99
SCFD1-204ENST00000463622 CD81P60033 236 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 RANP62826 216 aaKnown RBP2.6□□□□□ -1.99
SCFD1-204ENST00000463622 EIF5AP63241 154 aaKnown RBP2.6□□□□□ -1.99
SCFD1-204ENST00000463622 ERCC8Q13216 396 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 KHDC3LQ587J8 217 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 CLLU1Q5K131 121 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 KRTAP5-4Q6L8H1 288 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 TRPT1Q86TN4 253 aaKnown RBP2.6□□□□□ -1.99
SCFD1-204ENST00000463622 APRG1Q8IVJ8 170 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 SLC7A5P1Q8MH63 180 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 LINC00479Q96M42 142 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 DERL1Q9BUN8 251 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 Q9H3A6 140 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 TUBA4BQ9H853 241 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 ZNF331Q9NQX6 463 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-204ENST00000463622 KCNIP2Q9NS61 270 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 TMEM14CQ9P0S9 112 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 GNG13Q9P2W3 67 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 TRAV1-1A0A0B4J248 108 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 TRAV34A0A0B4J273 112 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 NUPR2A6NF83 97 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 IFNA7P01567 189 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 MBP02144 154 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 RPL7P18124 248 aaKnown RBP2.6□□□□□ -1.99
SCFD1-204ENST00000463622 ADCYAP1P18509 176 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 C4BPBP20851 252 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 GUCA2BQ16661 112 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 PRR9Q5T870 116 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 DPPA3Q6W0C5 159 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 ZNF767PQ75MW2 155 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 BPIFA4PQ86YQ2 179 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 Q8TAT8 98 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 RXFP4Q8TDU9 374 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 DYNLRB2Q8TF09 96 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 TVP23CQ96ET8 276 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 VGLL1Q99990 258 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 NRN1Q9NPD7 142 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 PPP1R14DQ9NXH3 145 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 SIGLEC8Q9NYZ4 499 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 RPH3ALQ9UNE2 315 aa2.6□□□□□ -1.99
SCFD1-204ENST00000463622 PKHD1P08F94 4074 aa2.59□□□□□ -1.99
SCFD1-204ENST00000463622 DNAH11Q96DT5 4516 aa2.59□□□□□ -1.99
SCFD1-204ENST00000463622 TRBV20OR9-2A0A075B6H5 130 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms