RNA–Protein interactions for RNA: ENST00000453297.5

MCF2L-219, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 1,819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-219ENST00000453297 F6UB75 175 aa18.46■□□□□ 0.55
MCF2L-219ENST00000453297 PROK1P58294 105 aa18.46■□□□□ 0.55
MCF2L-219ENST00000453297 RAB4BP61018 213 aa18.46■□□□□ 0.55
MCF2L-219ENST00000453297 FHL3Q13643 280 aa18.46■□□□□ 0.55
MCF2L-219ENST00000453297 A0A1B0GXF2 115 aa18.45■□□□□ 0.54
MCF2L-219ENST00000453297 CSN3P07498 182 aa18.45■□□□□ 0.54
MCF2L-219ENST00000453297 HIST1H1AQ02539 215 aaPredicted RBP18.45■□□□□ 0.54
MCF2L-219ENST00000453297 TMSB15BA0A087X1C1 80 aa18.44■□□□□ 0.54
MCF2L-219ENST00000453297 CCL24O00175 119 aa18.44■□□□□ 0.54
MCF2L-219ENST00000453297 HOXA5P20719 270 aa18.44■□□□□ 0.54
MCF2L-219ENST00000453297 SRSF2Q01130 221 aaKnown RBP18.44■□□□□ 0.54
MCF2L-219ENST00000453297 HIVEP1P15822 2718 aa18.44■□□□□ 0.54
MCF2L-219ENST00000453297 HLA-DQA1P01909 254 aa18.44■□□□□ 0.54
MCF2L-219ENST00000453297 GDF5OSQ5U4N7 250 aa18.44■□□□□ 0.54
MCF2L-219ENST00000453297 XKRY2A2RUG3 117 aa18.43■□□□□ 0.54
MCF2L-219ENST00000453297 ZNF688P0C7X2 276 aa18.43■□□□□ 0.54
MCF2L-219ENST00000453297 CRLF1O75462 422 aa18.42■□□□□ 0.54
MCF2L-219ENST00000453297 RPS20P60866 119 aaKnown RBP18.42■□□□□ 0.54
MCF2L-219ENST00000453297 SNRPD3P62318 126 aaKnown RBP18.42■□□□□ 0.54
MCF2L-219ENST00000453297 CAMPP49913 170 aa18.42■□□□□ 0.54
MCF2L-219ENST00000453297 PAFAH1B2P68402 229 aa18.42■□□□□ 0.54
MCF2L-219ENST00000453297 ZNF575Q86XF7 245 aa18.42■□□□□ 0.54
MCF2L-219ENST00000453297 FAM19A4Q96LR4 140 aa18.42■□□□□ 0.54
MCF2L-219ENST00000453297 ORM1P02763 201 aa18.41■□□□□ 0.54
MCF2L-219ENST00000453297 HBBP68871 147 aa18.41■□□□□ 0.54
MCF2L-219ENST00000453297 PSMG4Q5JS54 123 aa18.41■□□□□ 0.54
MCF2L-219ENST00000453297 Q6AWC8 147 aa18.41■□□□□ 0.54
MCF2L-219ENST00000453297 LINC01559Q495D7 138 aa18.4■□□□□ 0.54
MCF2L-219ENST00000453297 PRR9Q5T870 116 aa18.4■□□□□ 0.54
MCF2L-219ENST00000453297 ZFAND2AQ8N6M9 145 aa18.4■□□□□ 0.54
MCF2L-219ENST00000453297 NSD1Q96L73 2696 aaPredicted RBP18.4■□□□□ 0.54
MCF2L-219ENST00000453297 COA6Q5JTJ3 125 aaKnown RBP18.39■□□□□ 0.53
MCF2L-219ENST00000453297 GFI1BQ5VTD9 330 aa18.39■□□□□ 0.53
MCF2L-219ENST00000453297 C11orf21Q9P2W6 132 aa18.39■□□□□ 0.53
MCF2L-219ENST00000453297 TRBV7-9A0A0J9YWB2 115 aa18.38■□□□□ 0.53
MCF2L-219ENST00000453297 A0A1B0GUT8 65 aa18.38■□□□□ 0.53
MCF2L-219ENST00000453297 APCSP02743 223 aa18.38■□□□□ 0.53
MCF2L-219ENST00000453297 ARMS2P0C7Q2 107 aa18.38■□□□□ 0.53
MCF2L-219ENST00000453297 DYNLRB2Q8TF09 96 aa18.38■□□□□ 0.53
MCF2L-219ENST00000453297 SLAQ13239 276 aa18.37■□□□□ 0.53
MCF2L-219ENST00000453297 KIAA1644Q3SXP7 199 aa18.37■□□□□ 0.53
MCF2L-219ENST00000453297 LYZL1Q6UWQ5 148 aa18.37■□□□□ 0.53
MCF2L-219ENST00000453297 TPPP3Q9BW30 176 aa18.37■□□□□ 0.53
MCF2L-219ENST00000453297 FN1P02751 2386 aaKnown RBP18.37■□□□□ 0.53
MCF2L-219ENST00000453297 ADARB2-AS1A8MUL3 147 aa18.37■□□□□ 0.53
MCF2L-219ENST00000453297 AKR1D1P51857 326 aa18.37■□□□□ 0.53
MCF2L-219ENST00000453297 DEFB114Q30KQ6 69 aa18.37■□□□□ 0.53
MCF2L-219ENST00000453297 TMEM61Q8N0U2 210 aa18.37■□□□□ 0.53
MCF2L-219ENST00000453297 SSBP4Q9BWG4 385 aaPredicted RBP18.37■□□□□ 0.53
MCF2L-219ENST00000453297 IGKV3D-20A0A0C4DH25 116 aa18.36■□□□□ 0.53
MCF2L-219ENST00000453297 A0A0J9YX75 114 aa18.36■□□□□ 0.53
MCF2L-219ENST00000453297 J3KRW8 73 aa18.36■□□□□ 0.53
MCF2L-219ENST00000453297 IGLC6P0CF74 106 aa18.36■□□□□ 0.53
MCF2L-219ENST00000453297 CRISP2P16562 243 aa18.36■□□□□ 0.53
MCF2L-219ENST00000453297 CD33P20138 364 aa18.36■□□□□ 0.53
MCF2L-219ENST00000453297 RIGQ13278 110 aa18.36■□□□□ 0.53
MCF2L-219ENST00000453297 Q6ZQT7 251 aa18.36■□□□□ 0.53
MCF2L-219ENST00000453297 HIST3H2BBQ8N257 126 aa18.36■□□□□ 0.53
MCF2L-219ENST00000453297 TRAV2A0A0B4J234 112 aa18.35■□□□□ 0.53
MCF2L-219ENST00000453297 APRG1Q8IVJ8 170 aa18.35■□□□□ 0.53
MCF2L-219ENST00000453297 GRIFINA4D1Z8 144 aa18.35■□□□□ 0.53
MCF2L-219ENST00000453297 GPX1P07203 203 aa18.35■□□□□ 0.53
MCF2L-219ENST00000453297 KRTAP10-3P60369 221 aa18.35■□□□□ 0.53
MCF2L-219ENST00000453297 FER1L6-AS1Q8NA97 138 aa18.35■□□□□ 0.53
MCF2L-219ENST00000453297 BORCS7Q96B45 105 aa18.35■□□□□ 0.53
MCF2L-219ENST00000453297 SETXQ7Z333 2677 aaKnown RBP18.34■□□□□ 0.53
MCF2L-219ENST00000453297 IFITM10A6NMD0 228 aa18.34■□□□□ 0.53
MCF2L-219ENST00000453297 A0A1B0GW15 77 aa18.33■□□□□ 0.52
MCF2L-219ENST00000453297 CTRLP40313 264 aa18.33■□□□□ 0.52
MCF2L-219ENST00000453297 NSUN5P1Q3KNT7 163 aa18.33■□□□□ 0.52
MCF2L-219ENST00000453297 PDZD11Q5EBL8 140 aa18.33■□□□□ 0.52
MCF2L-219ENST00000453297 EBLN2Q6P2I7 272 aa18.33■□□□□ 0.52
MCF2L-219ENST00000453297 TRAV21A0A0B4J279 112 aa18.32■□□□□ 0.52
MCF2L-219ENST00000453297 RNASE4P34096 147 aaKnown RBP18.32■□□□□ 0.52
MCF2L-219ENST00000453297 KIR3DS1Q14943 382 aa18.32■□□□□ 0.52
MCF2L-219ENST00000453297 CD300EQ496F6 205 aaPredicted RBP18.32■□□□□ 0.52
MCF2L-219ENST00000453297 SIGLEC8Q9NYZ4 499 aa18.32■□□□□ 0.52
MCF2L-219ENST00000453297 A0A1B0GUS0 222 aa18.31■□□□□ 0.52
MCF2L-219ENST00000453297 S100A8P05109 93 aa18.31■□□□□ 0.52
MCF2L-219ENST00000453297 PRR31Q5SQ13 230 aa18.31■□□□□ 0.52
MCF2L-219ENST00000453297 GATD1Q8NB37 220 aa18.31■□□□□ 0.52
MCF2L-219ENST00000453297 SRIP30626 198 aa18.3■□□□□ 0.52
MCF2L-219ENST00000453297 FOXI2Q6ZQN5 318 aa18.3■□□□□ 0.52
MCF2L-219ENST00000453297 ODF3Q96PU9 254 aa18.3■□□□□ 0.52
MCF2L-219ENST00000453297 SETD2Q9BYW2 2564 aaPredicted RBP18.3■□□□□ 0.52
MCF2L-219ENST00000453297 KLLNB2CW77 178 aa18.3■□□□□ 0.52
MCF2L-219ENST00000453297 Q0VG73 95 aa18.3■□□□□ 0.52
MCF2L-219ENST00000453297 FLNBO75369 2602 aaKnown RBP18.3■□□□□ 0.52
MCF2L-219ENST00000453297 DUSP14O95147 198 aaKnown RBP18.29■□□□□ 0.52
MCF2L-219ENST00000453297 TP53TG3Q9ULZ0 132 aa18.29■□□□□ 0.52
MCF2L-219ENST00000453297 TRAV25A0A0B4J276 109 aa18.28■□□□□ 0.52
MCF2L-219ENST00000453297 MUC21A0A0G2JKD1 596 aa18.28■□□□□ 0.52
MCF2L-219ENST00000453297 MUC21A0A140T8X8 626 aa18.28■□□□□ 0.52
MCF2L-219ENST00000453297 DEFB131AP59861 70 aa18.28■□□□□ 0.52
MCF2L-219ENST00000453297 MUC21Q5SSG8 566 aa18.28■□□□□ 0.52
MCF2L-219ENST00000453297 NDUFA11Q86Y39 141 aa18.28■□□□□ 0.52
MCF2L-219ENST00000453297 TMEM256Q8N2U0 113 aa18.28■□□□□ 0.52
MCF2L-219ENST00000453297 LEPP41159 167 aa18.28■□□□□ 0.52
MCF2L-219ENST00000453297 SSTP61278 116 aa18.28■□□□□ 0.52
MCF2L-219ENST00000453297 SPAG8Q99932 426 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms