RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 IGHV1-69P01742 117 aa13.07□□□□□ -0.32
TCOF1-206ENST00000445265 TNRC6AQ8NDV7 1962 aaKnown RBP13.07□□□□□ -0.32
TCOF1-206ENST00000445265 NOTCH3Q9UM47 2321 aa13.07□□□□□ -0.32
TCOF1-206ENST00000445265 RBAKDNA6NC62 111 aa13.07□□□□□ -0.32
TCOF1-206ENST00000445265 NDUFA4O00483 81 aa13.07□□□□□ -0.32
TCOF1-206ENST00000445265 CD28P10747 220 aa13.07□□□□□ -0.32
TCOF1-206ENST00000445265 C2orf66Q6UXQ4 117 aa13.07□□□□□ -0.32
TCOF1-206ENST00000445265 LINC00173Q6ZV60 143 aa13.07□□□□□ -0.32
TCOF1-206ENST00000445265 DEFB125Q8N687 156 aa13.07□□□□□ -0.32
TCOF1-206ENST00000445265 NBL1P41271 181 aa13.06□□□□□ -0.32
TCOF1-206ENST00000445265 DYNAPQ8N1N2 210 aa13.06□□□□□ -0.32
TCOF1-206ENST00000445265 NDUFS8O00217 210 aa13.06□□□□□ -0.32
TCOF1-206ENST00000445265 GNLYP22749 145 aa13.06□□□□□ -0.32
TCOF1-206ENST00000445265 HLA-DMBP28068 263 aa13.06□□□□□ -0.32
TCOF1-206ENST00000445265 RUSC1-AS1Q66K80 236 aa13.06□□□□□ -0.32
TCOF1-206ENST00000445265 HCFC1P51610 2035 aa13.05□□□□□ -0.32
TCOF1-206ENST00000445265 IGFBPL1Q8WX77 278 aa13.05□□□□□ -0.32
TCOF1-206ENST00000445265 MRPL53Q96EL3 112 aaKnown RBP13.05□□□□□ -0.32
TCOF1-206ENST00000445265 SMIM2Q9BVW6 85 aa13.05□□□□□ -0.32
TCOF1-206ENST00000445265 TRAV2A0A0B4J234 112 aa13.05□□□□□ -0.32
TCOF1-206ENST00000445265 A0A1B0GXF2 115 aa13.05□□□□□ -0.32
TCOF1-206ENST00000445265 AGPAT4-IT1Q9H0P7 198 aa13.05□□□□□ -0.32
TCOF1-206ENST00000445265 WI2-2373I1.2A0A1W2PRP0 233 aa13.05□□□□□ -0.32
TCOF1-206ENST00000445265 GRNP28799 593 aaKnown RBP13.05□□□□□ -0.32
TCOF1-206ENST00000445265 PLEKHB2Q96CS7 222 aa13.05□□□□□ -0.32
TCOF1-206ENST00000445265 TMEM238C9JI98 176 aa13.04□□□□□ -0.32
TCOF1-206ENST00000445265 ZNF876PQ49A33 203 aa13.04□□□□□ -0.32
TCOF1-206ENST00000445265 A8MWV9 139 aa13.04□□□□□ -0.32
TCOF1-206ENST00000445265 HOXB4P17483 251 aaPredicted RBP13.04□□□□□ -0.32
TCOF1-206ENST00000445265 MBD6Q96DN6 1003 aa13.04□□□□□ -0.32
TCOF1-206ENST00000445265 MRPL35Q9NZE8 188 aaKnown RBP13.04□□□□□ -0.32
TCOF1-206ENST00000445265 EXPH5Q8NEV8 1989 aa13.04□□□□□ -0.32
TCOF1-206ENST00000445265 TMEM101Q96IK0 257 aa13.04□□□□□ -0.32
TCOF1-206ENST00000445265 LENEPQ9Y5L5 61 aa13.04□□□□□ -0.32
TCOF1-206ENST00000445265 CTSGP08311 255 aa13.04□□□□□ -0.32
TCOF1-206ENST00000445265 TTC32Q5I0X7 151 aa13.04□□□□□ -0.32
TCOF1-206ENST00000445265 DLX4Q92988 240 aaPredicted RBP13.03□□□□□ -0.32
TCOF1-206ENST00000445265 DKK2Q9UBU2 259 aa13.03□□□□□ -0.32
TCOF1-206ENST00000445265 IGHV7-81A0A0B4J1V7 117 aa13.03□□□□□ -0.32
TCOF1-206ENST00000445265 TRAV26-2A0A0B4J265 109 aa13.02□□□□□ -0.32
TCOF1-206ENST00000445265 F8VRH5 84 aa13.02□□□□□ -0.32
TCOF1-206ENST00000445265 K7EP34 96 aa13.02□□□□□ -0.32
TCOF1-206ENST00000445265 Q6ZVH6 145 aa13.02□□□□□ -0.32
TCOF1-206ENST00000445265 Q8N7P7 452 aa13.02□□□□□ -0.32
TCOF1-206ENST00000445265 ERG28Q9UKR5 140 aa13.02□□□□□ -0.32
TCOF1-206ENST00000445265 A0A087WWL8 130 aa13.02□□□□□ -0.32
TCOF1-206ENST00000445265 YAE1D1Q9NRH1 226 aa13.02□□□□□ -0.32
TCOF1-206ENST00000445265 UTRNP46939 3433 aa13.02□□□□□ -0.32
TCOF1-206ENST00000445265 CRXO43186 299 aaPredicted RBP13.02□□□□□ -0.33
TCOF1-206ENST00000445265 PAX2Q02962 417 aa13.02□□□□□ -0.33
TCOF1-206ENST00000445265 PGPEP1Q9NXJ5 209 aa13.02□□□□□ -0.33
TCOF1-206ENST00000445265 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.02□□□□□ -0.33
TCOF1-206ENST00000445265 MLST8Q9BVC4 326 aa13.02□□□□□ -0.33
TCOF1-206ENST00000445265 SCRT2Q9NQ03 307 aa13.02□□□□□ -0.33
TCOF1-206ENST00000445265 C2orf70A6NJV1 201 aa13.01□□□□□ -0.33
TCOF1-206ENST00000445265 ANXA2RQ3ZCQ2 193 aa13.01□□□□□ -0.33
TCOF1-206ENST00000445265 C20orf78Q9BR46 151 aa13.01□□□□□ -0.33
TCOF1-206ENST00000445265 TP53TG3Q9ULZ0 132 aa13.01□□□□□ -0.33
TCOF1-206ENST00000445265 CCL25O15444 150 aa13.01□□□□□ -0.33
TCOF1-206ENST00000445265 MSMBP08118 114 aa13.01□□□□□ -0.33
TCOF1-206ENST00000445265 TMEM262E9PQX1 116 aa13.01□□□□□ -0.33
TCOF1-206ENST00000445265 TAL2Q16559 108 aa13.01□□□□□ -0.33
TCOF1-206ENST00000445265 PIP4P2Q8N4L2 257 aa13.01□□□□□ -0.33
TCOF1-206ENST00000445265 K7EP13 123 aa13□□□□□ -0.33
TCOF1-206ENST00000445265 ZNF48Q96MX3 618 aaPredicted RBP13□□□□□ -0.33
TCOF1-206ENST00000445265 TP53TG1Q9Y2A0 90 aa13□□□□□ -0.33
TCOF1-206ENST00000445265 HLA-DRB4P13762 266 aa13□□□□□ -0.33
TCOF1-206ENST00000445265 ADAMTSL5Q6ZMM2 481 aa13□□□□□ -0.33
TCOF1-206ENST00000445265 HLA-DRB4X5D2U9 266 aa13□□□□□ -0.33
TCOF1-206ENST00000445265 A0A1W2PPM0 123 aa13□□□□□ -0.33
TCOF1-206ENST00000445265 CFHR4Q92496 578 aa13□□□□□ -0.33
TCOF1-206ENST00000445265 TMEM141Q96I45 108 aa13□□□□□ -0.33
TCOF1-206ENST00000445265 GATA3P23771 443 aa12.99□□□□□ -0.33
TCOF1-206ENST00000445265 IGHV3-64A0A075B6Q5 118 aa12.99□□□□□ -0.33
TCOF1-206ENST00000445265 STHQ8IWL8 128 aa12.99□□□□□ -0.33
TCOF1-206ENST00000445265 DEFB104AQ8WTQ1 72 aa12.99□□□□□ -0.33
TCOF1-206ENST00000445265 TRAV8-2A0A0B4J237 113 aa12.99□□□□□ -0.33
TCOF1-206ENST00000445265 CENPVL3A0A0U1RRI6 287 aa12.99□□□□□ -0.33
TCOF1-206ENST00000445265 C22orf34Q6ZV56 151 aa12.99□□□□□ -0.33
TCOF1-206ENST00000445265 MUC6Q6W4X9 2439 aa12.99□□□□□ -0.33
TCOF1-206ENST00000445265 KIAA1549Q9HCM3 1950 aa12.99□□□□□ -0.33
TCOF1-206ENST00000445265 MYMXA0A1B0GTQ4 84 aa12.99□□□□□ -0.33
TCOF1-206ENST00000445265 PLXNB1O43157 2135 aa12.99□□□□□ -0.33
TCOF1-206ENST00000445265 BUB3O43684 328 aa12.99□□□□□ -0.33
TCOF1-206ENST00000445265 ANKRD39Q53RE8 183 aa12.99□□□□□ -0.33
TCOF1-206ENST00000445265 GDF5OSQ5U4N7 250 aa12.99□□□□□ -0.33
TCOF1-206ENST00000445265 TRPT1Q86TN4 253 aaKnown RBP12.99□□□□□ -0.33
TCOF1-206ENST00000445265 A0A087WX48 190 aa12.98□□□□□ -0.33
TCOF1-206ENST00000445265 LINC00322Q6ZN03 302 aaPredicted RBP12.98□□□□□ -0.33
TCOF1-206ENST00000445265 IGKV3OR2-268A0A0C4DH90 116 aa12.98□□□□□ -0.33
TCOF1-206ENST00000445265 SLC25A16P16260 332 aa12.98□□□□□ -0.33
TCOF1-206ENST00000445265 PMVKQ15126 192 aa12.98□□□□□ -0.33
TCOF1-206ENST00000445265 H3BUA1 57 aa12.98□□□□□ -0.33
TCOF1-206ENST00000445265 EMP1P54849 157 aa12.98□□□□□ -0.33
TCOF1-206ENST00000445265 ZNF415Q09FC8 603 aa12.98□□□□□ -0.33
TCOF1-206ENST00000445265 K7EMI3 77 aa12.97□□□□□ -0.33
TCOF1-206ENST00000445265 DNAL4O96015 105 aa12.97□□□□□ -0.33
TCOF1-206ENST00000445265 TCF15Q12870 199 aa12.97□□□□□ -0.33
TCOF1-206ENST00000445265 CTRLP40313 264 aa12.97□□□□□ -0.33
TCOF1-206ENST00000445265 Q8N9W7 124 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms