RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 NIPBLQ6KC79 2804 aaeCLIP11.41□□□□□ -0.58
ACTB-204ENST00000425660 SETD2Q9BYW2 2564 aaPredicted RBP11.41□□□□□ -0.58
ACTB-204ENST00000425660 A0A1B0GXF2 115 aa11.41□□□□□ -0.58
ACTB-204ENST00000425660 FABP5P3A8MUU1 101 aa11.41□□□□□ -0.58
ACTB-204ENST00000425660 SPINK4O60575 86 aa11.41□□□□□ -0.58
ACTB-204ENST00000425660 TRAV2A0A0B4J234 112 aa11.4□□□□□ -0.58
ACTB-204ENST00000425660 ZNF705DP0CH99 300 aaPredicted RBP11.4□□□□□ -0.58
ACTB-204ENST00000425660 ZNF705BP0CI00 300 aaPredicted RBP11.4□□□□□ -0.58
ACTB-204ENST00000425660 SNRPEP62304 92 aaKnown RBP11.4□□□□□ -0.58
ACTB-204ENST00000425660 SNRPD3P62318 126 aaKnown RBP11.4□□□□□ -0.58
ACTB-204ENST00000425660 Q6AWC8 147 aa11.4□□□□□ -0.58
ACTB-204ENST00000425660 MRPL54Q6P161 138 aaKnown RBP11.4□□□□□ -0.58
ACTB-204ENST00000425660 TMEM136Q6ZRR5 245 aa11.4□□□□□ -0.58
ACTB-204ENST00000425660 SNURFLB1AK76 121 aa11.39□□□□□ -0.59
ACTB-204ENST00000425660 ZNF575Q86XF7 245 aa11.39□□□□□ -0.59
ACTB-204ENST00000425660 SIGLEC8Q9NYZ4 499 aa11.39□□□□□ -0.59
ACTB-204ENST00000425660 A0A1W2PRX2 142 aa11.39□□□□□ -0.59
ACTB-204ENST00000425660 XKRY2A2RUG3 117 aa11.39□□□□□ -0.59
ACTB-204ENST00000425660 TMEM189A5PLL7 270 aa11.39□□□□□ -0.59
ACTB-204ENST00000425660 ADARB2-AS1A8MUL3 147 aa11.39□□□□□ -0.59
ACTB-204ENST00000425660 F6UB75 175 aa11.39□□□□□ -0.59
ACTB-204ENST00000425660 UBE2CO00762 179 aa11.39□□□□□ -0.59
ACTB-204ENST00000425660 HLA-DQA1P01909 254 aa11.39□□□□□ -0.59
ACTB-204ENST00000425660 GZMBP10144 247 aa11.39□□□□□ -0.59
ACTB-204ENST00000425660 PAFAH1B2P68402 229 aa11.39□□□□□ -0.59
ACTB-204ENST00000425660 HIST1H1AQ02539 215 aaPredicted RBP11.39□□□□□ -0.59
ACTB-204ENST00000425660 LINC01559Q495D7 138 aa11.39□□□□□ -0.59
ACTB-204ENST00000425660 WFDC3Q8IUB2 231 aa11.39□□□□□ -0.59
ACTB-204ENST00000425660 APRG1Q8IVJ8 170 aa11.39□□□□□ -0.59
ACTB-204ENST00000425660 ZFAND2AQ8N6M9 145 aa11.39□□□□□ -0.59
ACTB-204ENST00000425660 CRISP2P16562 243 aa11.38□□□□□ -0.59
ACTB-204ENST00000425660 DEFB1P60022 68 aa11.38□□□□□ -0.59
ACTB-204ENST00000425660 RPS20P60866 119 aaKnown RBP11.38□□□□□ -0.59
ACTB-204ENST00000425660 MRPL18Q9H0U6 180 aaKnown RBP11.38□□□□□ -0.59
ACTB-204ENST00000425660 A0A1B0GUS0 222 aa11.37□□□□□ -0.59
ACTB-204ENST00000425660 ZNF688P0C7X2 276 aa11.37□□□□□ -0.59
ACTB-204ENST00000425660 TFPI2P48307 235 aa11.37□□□□□ -0.59
ACTB-204ENST00000425660 PGLYRP4Q96LB8 373 aa11.37□□□□□ -0.59
ACTB-204ENST00000425660 HBBP68871 147 aa11.37□□□□□ -0.59
ACTB-204ENST00000425660 DEFB114Q30KQ6 69 aa11.37□□□□□ -0.59
ACTB-204ENST00000425660 PSMG4Q5JS54 123 aa11.37□□□□□ -0.59
ACTB-204ENST00000425660 COA6Q5JTJ3 125 aaKnown RBP11.37□□□□□ -0.59
ACTB-204ENST00000425660 TMEM61Q8N0U2 210 aa11.37□□□□□ -0.59
ACTB-204ENST00000425660 NDUFA6P56556 154 aa11.36□□□□□ -0.59
ACTB-204ENST00000425660 GDF5OSQ5U4N7 250 aa11.36□□□□□ -0.59
ACTB-204ENST00000425660 ODF3Q96PU9 254 aa11.36□□□□□ -0.59
ACTB-204ENST00000425660 C2CD3Q4AC94 2353 aa11.36□□□□□ -0.59
ACTB-204ENST00000425660 A0A0J9YX75 114 aa11.35□□□□□ -0.59
ACTB-204ENST00000425660 A0A1B0GUT8 65 aa11.35□□□□□ -0.59
ACTB-204ENST00000425660 HOXA5P20719 270 aa11.35□□□□□ -0.59
ACTB-204ENST00000425660 PRR9Q5T870 116 aa11.35□□□□□ -0.59
ACTB-204ENST00000425660 DYNLRB2Q8TF09 96 aa11.35□□□□□ -0.59
ACTB-204ENST00000425660 IGKV3D-20A0A0C4DH25 116 aa11.35□□□□□ -0.59
ACTB-204ENST00000425660 ORM1P02763 201 aa11.35□□□□□ -0.59
ACTB-204ENST00000425660 IGLC6P0CF74 106 aa11.35□□□□□ -0.59
ACTB-204ENST00000425660 CTRLP40313 264 aa11.35□□□□□ -0.59
ACTB-204ENST00000425660 KRTAP10-3P60369 221 aa11.35□□□□□ -0.59
ACTB-204ENST00000425660 NDUFA11Q86Y39 141 aa11.35□□□□□ -0.59
ACTB-204ENST00000425660 C11orf21Q9P2W6 132 aa11.35□□□□□ -0.59
ACTB-204ENST00000425660 TRAV25A0A0B4J276 109 aa11.34□□□□□ -0.59
ACTB-204ENST00000425660 A0A1B0GW15 77 aa11.34□□□□□ -0.59
ACTB-204ENST00000425660 KLLNB2CW77 178 aa11.34□□□□□ -0.59
ACTB-204ENST00000425660 RAB4BP61018 213 aa11.34□□□□□ -0.59
ACTB-204ENST00000425660 JMJD1CQ15652 2540 aa11.33□□□□□ -0.59
ACTB-204ENST00000425660 TMSB15BA0A087X1C1 80 aa11.33□□□□□ -0.6
ACTB-204ENST00000425660 ARMS2P0C7Q2 107 aa11.33□□□□□ -0.6
ACTB-204ENST00000425660 CAMPP49913 170 aa11.33□□□□□ -0.6
ACTB-204ENST00000425660 SLAQ13239 276 aa11.33□□□□□ -0.6
ACTB-204ENST00000425660 CD300EQ496F6 205 aaPredicted RBP11.33□□□□□ -0.6
ACTB-204ENST00000425660 FOXI2Q6ZQN5 318 aa11.33□□□□□ -0.6
ACTB-204ENST00000425660 GATD1Q8NB37 220 aa11.33□□□□□ -0.6
ACTB-204ENST00000425660 SPAG8Q99932 426 aaPredicted RBP11.33□□□□□ -0.6
ACTB-204ENST00000425660 CNFNQ9BYD5 112 aa11.33□□□□□ -0.6
ACTB-204ENST00000425660 TRAV21A0A0B4J279 112 aa11.32□□□□□ -0.6
ACTB-204ENST00000425660 APCSP02743 223 aa11.32□□□□□ -0.6
ACTB-204ENST00000425660 EBLN2Q6P2I7 272 aa11.32□□□□□ -0.6
ACTB-204ENST00000425660 FER1L6-AS1Q8NA97 138 aa11.32□□□□□ -0.6
ACTB-204ENST00000425660 GPX1P07203 203 aa11.32□□□□□ -0.6
ACTB-204ENST00000425660 RIGQ13278 110 aa11.32□□□□□ -0.6
ACTB-204ENST00000425660 LYZL1Q6UWQ5 148 aa11.32□□□□□ -0.6
ACTB-204ENST00000425660 ZNF256Q9Y2P7 627 aaPredicted RBP11.32□□□□□ -0.6
ACTB-204ENST00000425660 DUSP14O95147 198 aaKnown RBP11.31□□□□□ -0.6
ACTB-204ENST00000425660 S100A8P05109 93 aa11.31□□□□□ -0.6
ACTB-204ENST00000425660 Q6ZQT7 251 aa11.31□□□□□ -0.6
ACTB-204ENST00000425660 A8MTW9 85 aa11.3□□□□□ -0.6
ACTB-204ENST00000425660 F2Z2F3 143 aa11.3□□□□□ -0.6
ACTB-204ENST00000425660 CD33P20138 364 aa11.3□□□□□ -0.6
ACTB-204ENST00000425660 NSUN5P1Q3KNT7 163 aa11.3□□□□□ -0.6
ACTB-204ENST00000425660 ZNF493Q6ZR52 646 aa11.3□□□□□ -0.6
ACTB-204ENST00000425660 HIST3H2BBQ8N257 126 aa11.3□□□□□ -0.6
ACTB-204ENST00000425660 BORCS7Q96B45 105 aa11.3□□□□□ -0.6
ACTB-204ENST00000425660 TPPP3Q9BW30 176 aa11.3□□□□□ -0.6
ACTB-204ENST00000425660 OR4C46A6NHA9 309 aa11.3□□□□□ -0.6
ACTB-204ENST00000425660 IFITM10A6NMD0 228 aa11.3□□□□□ -0.6
ACTB-204ENST00000425660 Q0VG73 95 aa11.3□□□□□ -0.6
ACTB-204ENST00000425660 KIR3DS1Q14943 382 aa11.3□□□□□ -0.6
ACTB-204ENST00000425660 GFI1BQ5VTD9 330 aa11.3□□□□□ -0.6
ACTB-204ENST00000425660 SSBP4Q9BWG4 385 aaPredicted RBP11.3□□□□□ -0.6
ACTB-204ENST00000425660 LEPP41159 167 aa11.29□□□□□ -0.6
ACTB-204ENST00000425660 DEFB131AP59861 70 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms