RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 RNF185Q96GF1 192 aa8.81□□□□□ -1
SEC61A1-202ENST00000424880 VKORC1Q9BQB6 163 aa8.81□□□□□ -1
SEC61A1-202ENST00000424880 SRSF9Q13242 221 aaKnown RBP eCLIP8.81□□□□□ -1
SEC61A1-202ENST00000424880 ZNF833PQ6ZTB9 187 aa8.81□□□□□ -1
SEC61A1-202ENST00000424880 TRGV9Q99603 122 aa8.81□□□□□ -1
SEC61A1-202ENST00000424880 SPTBN1Q01082 2364 aaKnown RBP8.81□□□□□ -1
SEC61A1-202ENST00000424880 SCGB2A1O75556 95 aa8.8□□□□□ -1
SEC61A1-202ENST00000424880 MRGPRG-AS1Q2M3A8 158 aa8.8□□□□□ -1
SEC61A1-202ENST00000424880 SCGB1D4Q6XE38 83 aa8.8□□□□□ -1
SEC61A1-202ENST00000424880 C22orf34Q6ZV56 151 aa8.8□□□□□ -1
SEC61A1-202ENST00000424880 FBXL15Q9H469 300 aa8.8□□□□□ -1
SEC61A1-202ENST00000424880 ABCA4P78363 2273 aa8.8□□□□□ -1
SEC61A1-202ENST00000424880 NCBP2LA6PVI3 153 aaKnown RBP8.8□□□□□ -1
SEC61A1-202ENST00000424880 CRLF1O75462 422 aa8.8□□□□□ -1
SEC61A1-202ENST00000424880 LHBP01229 141 aa8.8□□□□□ -1
SEC61A1-202ENST00000424880 IGKV1-17P01599 117 aa8.8□□□□□ -1
SEC61A1-202ENST00000424880 TNFAIP6P98066 277 aaPredicted RBP8.8□□□□□ -1
SEC61A1-202ENST00000424880 ERCC8Q13216 396 aa8.8□□□□□ -1
SEC61A1-202ENST00000424880 PLEKHB2Q96CS7 222 aa8.8□□□□□ -1
SEC61A1-202ENST00000424880 HIF1ANQ9NWT6 349 aa8.8□□□□□ -1
SEC61A1-202ENST00000424880 RNF7Q9UBF6 113 aa8.8□□□□□ -1
SEC61A1-202ENST00000424880 AKAP13Q12802 2813 aa8.8□□□□□ -1
SEC61A1-202ENST00000424880 AKAP6Q13023 2319 aa8.8□□□□□ -1
SEC61A1-202ENST00000424880 IGHV3OR16-13A0A075B7E8 117 aa8.8□□□□□ -1
SEC61A1-202ENST00000424880 IGHV3-74A0A0B4J1X5 117 aa8.8□□□□□ -1
SEC61A1-202ENST00000424880 LINC01619G3V211 115 aa8.8□□□□□ -1
SEC61A1-202ENST00000424880 HOXB4P17483 251 aaPredicted RBP8.8□□□□□ -1
SEC61A1-202ENST00000424880 RPL27AP46776 148 aaKnown RBP8.8□□□□□ -1
SEC61A1-202ENST00000424880 TMEM200BQ69YZ2 307 aa8.8□□□□□ -1
SEC61A1-202ENST00000424880 J3KRW8 73 aa8.79□□□□□ -1
SEC61A1-202ENST00000424880 PPDPFLQ8WWR9 84 aa8.79□□□□□ -1
SEC61A1-202ENST00000424880 TRBV6-1A0A0K0K1D8 114 aa8.79□□□□□ -1
SEC61A1-202ENST00000424880 INS-IGF2F8WCM5 200 aa8.79□□□□□ -1
SEC61A1-202ENST00000424880 CLEC3BP05452 202 aa8.79□□□□□ -1
SEC61A1-202ENST00000424880 TEX29Q8N6K0 151 aa8.79□□□□□ -1
SEC61A1-202ENST00000424880 MAP1AP78559 2803 aaPredicted RBP8.79□□□□□ -1
SEC61A1-202ENST00000424880 TRBV7-3A0A075B6L6 115 aa8.78□□□□□ -1
SEC61A1-202ENST00000424880 LINC01546A6NGU7 62 aa8.78□□□□□ -1
SEC61A1-202ENST00000424880 PLGLAQ15195 96 aa8.78□□□□□ -1
SEC61A1-202ENST00000424880 LYPD2Q6UXB3 125 aa8.78□□□□□ -1
SEC61A1-202ENST00000424880 DTX2Q86UW9 622 aa8.78□□□□□ -1
SEC61A1-202ENST00000424880 ZNF575Q86XF7 245 aa8.78□□□□□ -1
SEC61A1-202ENST00000424880 DLX4Q92988 240 aaPredicted RBP8.78□□□□□ -1
SEC61A1-202ENST00000424880 SPANXA1Q9NS26 97 aa8.78□□□□□ -1
SEC61A1-202ENST00000424880 TRAV4A0A0B4J268 109 aa8.78□□□□□ -1
SEC61A1-202ENST00000424880 RHODO00212 210 aa8.78□□□□□ -1
SEC61A1-202ENST00000424880 CRIP2P52943 208 aaPredicted RBP8.78□□□□□ -1
SEC61A1-202ENST00000424880 VMA21Q3ZAQ7 101 aa8.78□□□□□ -1
SEC61A1-202ENST00000424880 MYOZ3Q8TDC0 251 aa8.78□□□□□ -1
SEC61A1-202ENST00000424880 CCL17Q92583 94 aa8.78□□□□□ -1
SEC61A1-202ENST00000424880 A0A087WX48 190 aa8.78□□□□□ -1
SEC61A1-202ENST00000424880 IGHV3-66A0A0C4DH42 116 aa8.78□□□□□ -1
SEC61A1-202ENST00000424880 GAGE12JA6NER3 117 aa8.78□□□□□ -1
SEC61A1-202ENST00000424880 GAGE7O76087 117 aa8.78□□□□□ -1
SEC61A1-202ENST00000424880 TCL1BO95988 128 aa8.78□□□□□ -1
SEC61A1-202ENST00000424880 GAGE12FP0CL80 117 aa8.78□□□□□ -1
SEC61A1-202ENST00000424880 GAGE12GP0CL81 117 aa8.78□□□□□ -1
SEC61A1-202ENST00000424880 GAGE12IP0CL82 117 aa8.78□□□□□ -1
SEC61A1-202ENST00000424880 SCGB1C2P0DMR2 95 aa8.78□□□□□ -1
SEC61A1-202ENST00000424880 GAGE4Q13068 117 aa8.78□□□□□ -1
SEC61A1-202ENST00000424880 MDS2Q8NDY4 140 aa8.78□□□□□ -1
SEC61A1-202ENST00000424880 RAB9BQ9NP90 201 aa8.78□□□□□ -1
SEC61A1-202ENST00000424880 IGHV1-46P01743 117 aa8.77□□□□□ -1.01
SEC61A1-202ENST00000424880 LINC01559Q495D7 138 aa8.77□□□□□ -1.01
SEC61A1-202ENST00000424880 ANKRD29Q8N6D5 301 aa8.77□□□□□ -1.01
SEC61A1-202ENST00000424880 SCNM1Q9BWG6 230 aa8.77□□□□□ -1.01
SEC61A1-202ENST00000424880 FABP5P3A8MUU1 101 aa8.76□□□□□ -1.01
SEC61A1-202ENST00000424880 TEN1Q86WV5 123 aa8.76□□□□□ -1.01
SEC61A1-202ENST00000424880 PRR25Q96S07 402 aa8.76□□□□□ -1.01
SEC61A1-202ENST00000424880 AAMDCQ9H7C9 122 aa8.76□□□□□ -1.01
SEC61A1-202ENST00000424880 NBASA2RRP1 2371 aa8.76□□□□□ -1.01
SEC61A1-202ENST00000424880 CENPVL3A0A0U1RRI6 287 aa8.76□□□□□ -1.01
SEC61A1-202ENST00000424880 LGALS1P09382 135 aaKnown RBP8.76□□□□□ -1.01
SEC61A1-202ENST00000424880 TRPT1Q86TN4 253 aaKnown RBP8.76□□□□□ -1.01
SEC61A1-202ENST00000424880 SBSPONQ8IVN8 264 aa8.76□□□□□ -1.01
SEC61A1-202ENST00000424880 RNF182Q8N6D2 247 aa8.76□□□□□ -1.01
SEC61A1-202ENST00000424880 APC2O95996 2303 aa8.76□□□□□ -1.01
SEC61A1-202ENST00000424880 TRAV8-2A0A0B4J237 113 aa8.76□□□□□ -1.01
SEC61A1-202ENST00000424880 MYMXA0A1B0GTQ4 84 aa8.76□□□□□ -1.01
SEC61A1-202ENST00000424880 ZNF815PA8K554 130 aa8.76□□□□□ -1.01
SEC61A1-202ENST00000424880 TMEM262E9PQX1 116 aa8.76□□□□□ -1.01
SEC61A1-202ENST00000424880 ZNF491Q8N8L2 437 aa8.76□□□□□ -1.01
SEC61A1-202ENST00000424880 RNF125Q96EQ8 232 aa8.76□□□□□ -1.01
SEC61A1-202ENST00000424880 BSNQ9UPA5 3926 aa8.75□□□□□ -1.01
SEC61A1-202ENST00000424880 SPTA1P02549 2419 aa8.75□□□□□ -1.01
SEC61A1-202ENST00000424880 SLC25A16P16260 332 aa8.75□□□□□ -1.01
SEC61A1-202ENST00000424880 NDUFV3P56181 108 aaKnown RBP8.75□□□□□ -1.01
SEC61A1-202ENST00000424880 TMEM78Q5T7P6 136 aa8.75□□□□□ -1.01
SEC61A1-202ENST00000424880 PRAC2D3DTV9 90 aa8.75□□□□□ -1.01
SEC61A1-202ENST00000424880 TM4SF5O14894 197 aa8.75□□□□□ -1.01
SEC61A1-202ENST00000424880 SHANK2-AS3Q9BTD1 123 aa8.75□□□□□ -1.01
SEC61A1-202ENST00000424880 IGHV3-49A0A0A0MS15 119 aa8.75□□□□□ -1.01
SEC61A1-202ENST00000424880 ZNF688P0C7X2 276 aa8.75□□□□□ -1.01
SEC61A1-202ENST00000424880 RAXQ9Y2V3 346 aa8.75□□□□□ -1.01
SEC61A1-202ENST00000424880 COX7A1P24310 79 aa8.74□□□□□ -1.01
SEC61A1-202ENST00000424880 ARL3P36405 182 aa8.74□□□□□ -1.01
SEC61A1-202ENST00000424880 TMEM190Q8WZ59 177 aa8.74□□□□□ -1.01
SEC61A1-202ENST00000424880 PRADC1Q9BSG0 188 aa8.74□□□□□ -1.01
SEC61A1-202ENST00000424880 BEX4Q9NWD9 120 aaPredicted RBP8.74□□□□□ -1.01
SEC61A1-202ENST00000424880 MZT1Q08AG7 82 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms