RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 KRTAP10-2P60368 255 aa12.69□□□□□ -0.38
SREBF1-206ENST00000423161 CYCSP99999 105 aaKnown RBP12.69□□□□□ -0.38
SREBF1-206ENST00000423161 ZNF415Q09FC8 603 aa12.69□□□□□ -0.38
SREBF1-206ENST00000423161 PRO0255Q9UI72 69 aa12.69□□□□□ -0.38
SREBF1-206ENST00000423161 PRAF2O60831 178 aa12.68□□□□□ -0.38
SREBF1-206ENST00000423161 UPK1BO75841 260 aa12.68□□□□□ -0.38
SREBF1-206ENST00000423161 RANP62826 216 aaKnown RBP12.68□□□□□ -0.38
SREBF1-206ENST00000423161 ATP5SQ99766 215 aa12.68□□□□□ -0.38
SREBF1-206ENST00000423161 RBAKDNA6NC62 111 aa12.67□□□□□ -0.38
SREBF1-206ENST00000423161 NXPH4O95158 308 aa12.67□□□□□ -0.38
SREBF1-206ENST00000423161 UBE2L3P68036 154 aaKnown RBP12.67□□□□□ -0.38
SREBF1-206ENST00000423161 MUC21Q5SSG8 566 aa12.67□□□□□ -0.38
SREBF1-206ENST00000423161 LYPD1Q8N2G4 141 aa12.67□□□□□ -0.38
SREBF1-206ENST00000423161 C8orf49Q96NF6 230 aa12.67□□□□□ -0.38
SREBF1-206ENST00000423161 INMT-MINDY4F8WBC2 141 aa12.66□□□□□ -0.38
SREBF1-206ENST00000423161 CRYBA4P53673 196 aa12.66□□□□□ -0.38
SREBF1-206ENST00000423161 H2BFSP57053 126 aa12.66□□□□□ -0.38
SREBF1-206ENST00000423161 SLAQ13239 276 aa12.66□□□□□ -0.38
SREBF1-206ENST00000423161 ZNF266Q14584 549 aa12.66□□□□□ -0.38
SREBF1-206ENST00000423161 FFAR4Q5NUL3 377 aa12.66□□□□□ -0.38
SREBF1-206ENST00000423161 PPP1R1CQ8WVI7 109 aa12.66□□□□□ -0.38
SREBF1-206ENST00000423161 HHLA3Q9XRX5 114 aa12.66□□□□□ -0.38
SREBF1-206ENST00000423161 FHL2Q14192 279 aa12.65□□□□□ -0.38
SREBF1-206ENST00000423161 MRPL23Q16540 153 aaKnown RBP12.65□□□□□ -0.38
SREBF1-206ENST00000423161 KHDC3LQ587J8 217 aa12.65□□□□□ -0.38
SREBF1-206ENST00000423161 Q6ZRN7 208 aaPredicted RBP12.65□□□□□ -0.38
SREBF1-206ENST00000423161 HSPB11Q9Y547 144 aa12.65□□□□□ -0.38
SREBF1-206ENST00000423161 IFITM3Q01628 133 aa12.64□□□□□ -0.39
SREBF1-206ENST00000423161 Q8N1X5 172 aa12.64□□□□□ -0.39
SREBF1-206ENST00000423161 MDFICQ9P1T7 246 aa12.64□□□□□ -0.39
SREBF1-206ENST00000423161 TRGV4A0A0C4DH28 118 aa12.63□□□□□ -0.39
SREBF1-206ENST00000423161 DIRC3C9JPN6 131 aa12.63□□□□□ -0.39
SREBF1-206ENST00000423161 MPC2O95563 127 aa12.63□□□□□ -0.39
SREBF1-206ENST00000423161 IFNA5P01569 189 aa12.63□□□□□ -0.39
SREBF1-206ENST00000423161 SFTA3P0C7M3 94 aa12.63□□□□□ -0.39
SREBF1-206ENST00000423161 PET100P0DJ07 73 aa12.63□□□□□ -0.39
SREBF1-206ENST00000423161 TAS2R45P59539 299 aa12.63□□□□□ -0.39
SREBF1-206ENST00000423161 Q6AWC8 147 aa12.63□□□□□ -0.39
SREBF1-206ENST00000423161 SCGB1C1Q8TD33 95 aa12.63□□□□□ -0.39
SREBF1-206ENST00000423161 SMIM3Q9BZL3 60 aa12.63□□□□□ -0.39
SREBF1-206ENST00000423161 LENEPQ9Y5L5 61 aa12.63□□□□□ -0.39
SREBF1-206ENST00000423161 TRGV11A0A075B6L2 103 aa12.62□□□□□ -0.39
SREBF1-206ENST00000423161 TMEM183BQ1AE95 376 aa12.62□□□□□ -0.39
SREBF1-206ENST00000423161 LYPD5Q6UWN5 251 aa12.62□□□□□ -0.39
SREBF1-206ENST00000423161 FAM159AQ6UWV7 190 aa12.62□□□□□ -0.39
SREBF1-206ENST00000423161 NEGR1Q7Z3B1 354 aa12.62□□□□□ -0.39
SREBF1-206ENST00000423161 TMEM183AQ8IXX5 376 aa12.62□□□□□ -0.39
SREBF1-206ENST00000423161 HYLS1Q96M11 299 aa12.62□□□□□ -0.39
SREBF1-206ENST00000423161 MARVELD1Q9BSK0 173 aa12.62□□□□□ -0.39
SREBF1-206ENST00000423161 SPXQ9BT56 116 aa12.62□□□□□ -0.39
SREBF1-206ENST00000423161 APOBP04114 4563 aaKnown RBP12.62□□□□□ -0.39
SREBF1-206ENST00000423161 SSNA1O43805 119 aa12.61□□□□□ -0.39
SREBF1-206ENST00000423161 EIF3GO75821 320 aaKnown RBP eCLIP12.61□□□□□ -0.39
SREBF1-206ENST00000423161 RPL12P30050 165 aaKnown RBP12.61□□□□□ -0.39
SREBF1-206ENST00000423161 OR10G4Q8NGN3 311 aa12.61□□□□□ -0.39
SREBF1-206ENST00000423161 ZNF479Q96JC4 524 aa12.61□□□□□ -0.39
SREBF1-206ENST00000423161 SCRT2Q9NQ03 307 aa12.61□□□□□ -0.39
SREBF1-206ENST00000423161 RPH3ALQ9UNE2 315 aa12.61□□□□□ -0.39
SREBF1-206ENST00000423161 SRIP30626 198 aa12.6□□□□□ -0.39
SREBF1-206ENST00000423161 ERVFC1-1P60608 527 aa12.6□□□□□ -0.39
SREBF1-206ENST00000423161 IQCF2Q8IXL9 164 aa12.6□□□□□ -0.39
SREBF1-206ENST00000423161 CMTM2Q8TAZ6 248 aa12.6□□□□□ -0.39
SREBF1-206ENST00000423161 PCNPQ8WW12 178 aaKnown RBP12.6□□□□□ -0.39
SREBF1-206ENST00000423161 TMED6Q8WW62 240 aa12.6□□□□□ -0.39
SREBF1-206ENST00000423161 RASL10AQ92737 203 aa12.6□□□□□ -0.39
SREBF1-206ENST00000423161 OTORQ9NRC9 128 aa12.6□□□□□ -0.39
SREBF1-206ENST00000423161 NAGKQ9UJ70 344 aa12.6□□□□□ -0.39
SREBF1-206ENST00000423161 TNFRSF18Q9Y5U5 241 aa12.6□□□□□ -0.39
SREBF1-206ENST00000423161 K7EQD1 137 aa12.59□□□□□ -0.39
SREBF1-206ENST00000423161 EREGO14944 169 aa12.59□□□□□ -0.39
SREBF1-206ENST00000423161 MBD2Q9UBB5 411 aa12.59□□□□□ -0.39
SREBF1-206ENST00000423161 LY96Q9Y6Y9 160 aa12.59□□□□□ -0.39
SREBF1-206ENST00000423161 PGPA6NDG6 321 aa12.58□□□□□ -0.4
SREBF1-206ENST00000423161 GYPEP15421 78 aa12.58□□□□□ -0.4
SREBF1-206ENST00000423161 ACOT6Q3I5F7 207 aaPredicted RBP12.58□□□□□ -0.4
SREBF1-206ENST00000423161 FAM74A1Q5RGS3 127 aa12.58□□□□□ -0.4
SREBF1-206ENST00000423161 NFE4Q86UQ8 179 aa12.58□□□□□ -0.4
SREBF1-206ENST00000423161 PTTG2Q9NZH5 202 aa12.58□□□□□ -0.4
SREBF1-206ENST00000423161 TRAV9-2A0A087WT02 112 aa12.57□□□□□ -0.4
SREBF1-206ENST00000423161 ORM1P02763 201 aa12.57□□□□□ -0.4
SREBF1-206ENST00000423161 TDRG1Q3Y452 100 aa12.57□□□□□ -0.4
SREBF1-206ENST00000423161 PQLC2Q6ZP29 291 aa12.57□□□□□ -0.4
SREBF1-206ENST00000423161 GOLT1AQ6ZVE7 132 aa12.57□□□□□ -0.4
SREBF1-206ENST00000423161 WFDC10BQ8IUB3 73 aa12.57□□□□□ -0.4
SREBF1-206ENST00000423161 WFDC1Q9HC57 220 aa12.57□□□□□ -0.4
SREBF1-206ENST00000423161 PGPEP1Q9NXJ5 209 aa12.57□□□□□ -0.4
SREBF1-206ENST00000423161 TRAV4A0A0B4J268 109 aa12.56□□□□□ -0.4
SREBF1-206ENST00000423161 A0A1W2PPV4 95 aa12.56□□□□□ -0.4
SREBF1-206ENST00000423161 FUSP35637 526 aaKnown RBP eCLIP12.56□□□□□ -0.44e-6■□□□□ 11.3
SREBF1-206ENST00000423161 DEFA1P59665 94 aa12.56□□□□□ -0.4
SREBF1-206ENST00000423161 DEFA3P59666 94 aa12.56□□□□□ -0.4
SREBF1-206ENST00000423161 DNAH5Q8TE73 4624 aa12.56□□□□□ -0.4
SREBF1-206ENST00000423161 TRAV21A0A0B4J279 112 aa12.55□□□□□ -0.4
SREBF1-206ENST00000423161 C9JCJ5 164 aa12.55□□□□□ -0.4
SREBF1-206ENST00000423161 F6UZH7 168 aa12.55□□□□□ -0.4
SREBF1-206ENST00000423161 GNRH2O43555 120 aa12.55□□□□□ -0.4
SREBF1-206ENST00000423161 RAB2AP61019 212 aa12.55□□□□□ -0.4
SREBF1-206ENST00000423161 OR4C5Q8NGB2 326 aa12.55□□□□□ -0.4
SREBF1-206ENST00000423161 TXNDC17Q9BRA2 123 aa12.55□□□□□ -0.4
SREBF1-206ENST00000423161 TRAV8-1A0A0A6YYK1 113 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 298.7 ms