RNA–Protein interactions for RNA: ENST00000420377.6

PTPN22-202, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN22, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-202ENST00000420377 A0A096LNT2 108 aa3.19□□□□□ -1.9
PTPN22-202ENST00000420377 SMIM27A0A1W2PRY6 76 aa3.19□□□□□ -1.9
PTPN22-202ENST00000420377 PLAC8L1A1L4L8 177 aa3.19□□□□□ -1.9
PTPN22-202ENST00000420377 C11orf94C9JXX5 98 aa3.19□□□□□ -1.9
PTPN22-202ENST00000420377 SS18L1O75177 396 aaPredicted RBP3.19□□□□□ -1.9
PTPN22-202ENST00000420377 RPS18P62269 152 aaKnown RBP3.19□□□□□ -1.9
PTPN22-202ENST00000420377 GNB1P62873 340 aa3.19□□□□□ -1.9
PTPN22-202ENST00000420377 CFHR3Q02985 330 aa3.19□□□□□ -1.9
PTPN22-202ENST00000420377 ZNF816Q0VGE8 651 aaPredicted RBP3.19□□□□□ -1.9
PTPN22-202ENST00000420377 MLANAQ16655 118 aa3.19□□□□□ -1.9
PTPN22-202ENST00000420377 DEFB121Q5J5C9 76 aa3.19□□□□□ -1.9
PTPN22-202ENST00000420377 FP248Q71RG6 208 aaPredicted RBP3.19□□□□□ -1.9
PTPN22-202ENST00000420377 LINC00305Q7Z4B0 112 aa3.19□□□□□ -1.9
PTPN22-202ENST00000420377 SERP2Q8N6R1 65 aa3.19□□□□□ -1.9
PTPN22-202ENST00000420377 NT5CQ8TCD5 201 aa3.19□□□□□ -1.9
PTPN22-202ENST00000420377 EEF1AKMT3Q96AZ1 226 aa3.19□□□□□ -1.9
PTPN22-202ENST00000420377 NMNAT3Q96T66 252 aa3.19□□□□□ -1.9
PTPN22-202ENST00000420377 CCL19Q99731 98 aa3.19□□□□□ -1.9
PTPN22-202ENST00000420377 TM2D3Q9BRN9 247 aa3.19□□□□□ -1.9
PTPN22-202ENST00000420377 OSTCQ9NRP0 149 aa3.19□□□□□ -1.9
PTPN22-202ENST00000420377 DEPPQ9NTK1 212 aa3.19□□□□□ -1.9
PTPN22-202ENST00000420377 WDR83OSQ9Y284 106 aa3.19□□□□□ -1.9
PTPN22-202ENST00000420377 C19orf71A6NCJ1 209 aa3.18□□□□□ -1.9
PTPN22-202ENST00000420377 SRRM4A7MD48 611 aaKnown RBP3.18□□□□□ -1.9
PTPN22-202ENST00000420377 SMKR1H3BMG3 65 aa3.18□□□□□ -1.9
PTPN22-202ENST00000420377 LYPD3O95274 346 aa3.18□□□□□ -1.9
PTPN22-202ENST00000420377 IGKV1D-16P01601 117 aa3.18□□□□□ -1.9
PTPN22-202ENST00000420377 SAA4P35542 130 aa3.18□□□□□ -1.9
PTPN22-202ENST00000420377 MYCNOSP40205 109 aa3.18□□□□□ -1.9
PTPN22-202ENST00000420377 KRTAP24-1Q3LI83 254 aa3.18□□□□□ -1.9
PTPN22-202ENST00000420377 CEMP1Q6PRD7 247 aaPredicted RBP3.18□□□□□ -1.9
PTPN22-202ENST00000420377 DNAH12Q6ZR08 3092 aa3.18□□□□□ -1.9
PTPN22-202ENST00000420377 ATP5L2Q7Z4Y8 100 aa3.18□□□□□ -1.9
PTPN22-202ENST00000420377 MARCH3Q86UD3 253 aa3.18□□□□□ -1.9
PTPN22-202ENST00000420377 DOPEY2Q9Y3R5 2298 aa3.18□□□□□ -1.9
PTPN22-202ENST00000420377 ESPL1Q14674 2120 aa3.18□□□□□ -1.9
PTPN22-202ENST00000420377 CENPFP49454 3210 aa3.18□□□□□ -1.9
PTPN22-202ENST00000420377 UPK2O00526 184 aa3.18□□□□□ -1.9
PTPN22-202ENST00000420377 SLC25A20O43772 301 aa3.18□□□□□ -1.9
PTPN22-202ENST00000420377 PSMB2P49721 201 aa3.18□□□□□ -1.9
PTPN22-202ENST00000420377 LINC00643Q86TS7 51 aa3.18□□□□□ -1.9
PTPN22-202ENST00000420377 ODF3L1Q8IXM7 274 aa3.18□□□□□ -1.9
PTPN22-202ENST00000420377 GVQW1Q8N7I0 195 aa3.18□□□□□ -1.9
PTPN22-202ENST00000420377 LY6G5BQ8NDX9 201 aa3.18□□□□□ -1.9
PTPN22-202ENST00000420377 SSMEM1Q8WWF3 244 aa3.18□□□□□ -1.9
PTPN22-202ENST00000420377 RITA1Q96K30 269 aa3.18□□□□□ -1.9
PTPN22-202ENST00000420377 TRGV9Q99603 122 aa3.18□□□□□ -1.9
PTPN22-202ENST00000420377 SLC25A2Q9BXI2 301 aa3.18□□□□□ -1.9
PTPN22-202ENST00000420377 Q9H8V8 135 aa3.18□□□□□ -1.9
PTPN22-202ENST00000420377 KIF26BQ2KJY2 2108 aa3.18□□□□□ -1.9
PTPN22-202ENST00000420377 CFAP46Q8IYW2 2715 aa3.17□□□□□ -1.9
PTPN22-202ENST00000420377 ZFHX4Q86UP3 3567 aa3.17□□□□□ -1.9
PTPN22-202ENST00000420377 TRBV20OR9-2A0A075B6H5 130 aa3.17□□□□□ -1.9
PTPN22-202ENST00000420377 IGHV1-58A0A0C4DH39 117 aa3.17□□□□□ -1.9
PTPN22-202ENST00000420377 UBE2L5PA0A1B0GUS4 154 aa3.17□□□□□ -1.9
PTPN22-202ENST00000420377 SCO2A0A1W2PP80 73 aa3.17□□□□□ -1.9
PTPN22-202ENST00000420377 INAFM1C9JVW0 142 aa3.17□□□□□ -1.9
PTPN22-202ENST00000420377 HOXA3O43365 443 aaPredicted RBP3.17□□□□□ -1.9
PTPN22-202ENST00000420377 FRMD6-AS1P0C7T7 363 aa3.17□□□□□ -1.9
PTPN22-202ENST00000420377 MGST1P10620 155 aaKnown RBP3.17□□□□□ -1.9
PTPN22-202ENST00000420377 ZNF136P52737 540 aa3.17□□□□□ -1.9
PTPN22-202ENST00000420377 ZNF56Q15929 161 aa3.17□□□□□ -1.9
PTPN22-202ENST00000420377 C1orf100Q5SVJ3 147 aa3.17□□□□□ -1.9
PTPN22-202ENST00000420377 PVRIGQ6DKI7 326 aa3.17□□□□□ -1.9
PTPN22-202ENST00000420377 SDIM1Q6ZPB5 146 aa3.17□□□□□ -1.9
PTPN22-202ENST00000420377 LINC00173Q6ZV60 143 aa3.17□□□□□ -1.9
PTPN22-202ENST00000420377 PATE1Q8WXA2 126 aa3.17□□□□□ -1.9
PTPN22-202ENST00000420377 C17orf77Q96MU5 243 aa3.17□□□□□ -1.9
PTPN22-202ENST00000420377 CYSTM1Q9H1C7 97 aa3.17□□□□□ -1.9
PTPN22-202ENST00000420377 ZFYVE26Q68DK2 2539 aa3.17□□□□□ -1.9
PTPN22-202ENST00000420377 FLNBO75369 2602 aaKnown RBP3.17□□□□□ -1.9
PTPN22-202ENST00000420377 TRBV25-1A0A075B6N4 114 aa3.17□□□□□ -1.9
PTPN22-202ENST00000420377 LYRM9A8MSI8 78 aa3.17□□□□□ -1.9
PTPN22-202ENST00000420377 C8orf87E5RJ46 101 aa3.17□□□□□ -1.9
PTPN22-202ENST00000420377 RFPL3SP0C7P2 107 aa3.17□□□□□ -1.9
PTPN22-202ENST00000420377 NANOS3P60323 173 aaKnown RBP3.17□□□□□ -1.9
PTPN22-202ENST00000420377 C1orf140Q5VVS0 124 aa3.17□□□□□ -1.9
PTPN22-202ENST00000420377 C9orf139Q6ZV77 190 aa3.17□□□□□ -1.9
PTPN22-202ENST00000420377 KTN1-AS1Q86SY8 53 aa3.17□□□□□ -1.9
PTPN22-202ENST00000420377 C11orf52Q96A22 123 aa3.17□□□□□ -1.9
PTPN22-202ENST00000420377 FAM215AQ9Y5M1 114 aa3.17□□□□□ -1.9
PTPN22-202ENST00000420377 BPTFQ12830 3046 aa3.17□□□□□ -1.9
PTPN22-202ENST00000420377 INS-IGF2F8WCM5 200 aa3.16□□□□□ -1.9
PTPN22-202ENST00000420377 VCYO14598 125 aa3.16□□□□□ -1.9
PTPN22-202ENST00000420377 NXPH3O95157 252 aa3.16□□□□□ -1.9
PTPN22-202ENST00000420377 HERVK_113P61574 105 aa3.16□□□□□ -1.9
PTPN22-202ENST00000420377 RPL18Q07020 188 aaKnown RBP3.16□□□□□ -1.9
PTPN22-202ENST00000420377 RPP25LQ8N5L8 163 aaKnown RBP3.16□□□□□ -1.9
PTPN22-202ENST00000420377 THAP8Q8NA92 274 aa3.16□□□□□ -1.9
PTPN22-202ENST00000420377 USP9YO00507 2555 aaPredicted RBP3.16□□□□□ -1.9
PTPN22-202ENST00000420377 SPTA1P02549 2419 aa3.16□□□□□ -1.9
PTPN22-202ENST00000420377 CFAP54Q96N23 3096 aa3.16□□□□□ -1.9
PTPN22-202ENST00000420377 NAV2Q8IVL1 2488 aa3.16□□□□□ -1.9
PTPN22-202ENST00000420377 TRBV7-3A0A075B6L6 115 aa3.16□□□□□ -1.9
PTPN22-202ENST00000420377 IGKV3D-11A0A0A0MRZ8 115 aa3.16□□□□□ -1.9
PTPN22-202ENST00000420377 PIGBOS1A0A0B4J2F0 54 aa3.16□□□□□ -1.9
PTPN22-202ENST00000420377 LINC01548A6NM66 108 aa3.16□□□□□ -1.9
PTPN22-202ENST00000420377 DEFB108AA8MXU0 73 aa3.16□□□□□ -1.9
PTPN22-202ENST00000420377 H3BMM0 161 aa3.16□□□□□ -1.9
PTPN22-202ENST00000420377 SNRNP200O75643 2136 aaKnown RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms