RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 C18orf32Q8TCD1 76 aa12.36□□□□□ -0.43
PHRF1-203ENST00000416188 KLK9Q9UKQ9 250 aa12.36□□□□□ -0.43
PHRF1-203ENST00000416188 PSCAO43653 123 aa12.36□□□□□ -0.43
PHRF1-203ENST00000416188 CCL24O00175 119 aa12.36□□□□□ -0.43
PHRF1-203ENST00000416188 TIMM21Q9BVV7 248 aa12.35□□□□□ -0.43
PHRF1-203ENST00000416188 POLR3KQ9Y2Y1 108 aaPredicted RBP12.35□□□□□ -0.43
PHRF1-203ENST00000416188 DYSFO75923 2080 aa12.35□□□□□ -0.43
PHRF1-203ENST00000416188 SSBP2P81877 361 aaPredicted RBP12.35□□□□□ -0.43
PHRF1-203ENST00000416188 WIPF3A6NGB9 483 aa12.35□□□□□ -0.43
PHRF1-203ENST00000416188 Q0VG73 95 aa12.35□□□□□ -0.43
PHRF1-203ENST00000416188 C8orf86Q6ZUL3 223 aa12.35□□□□□ -0.43
PHRF1-203ENST00000416188 C11orf53Q8IXP5 236 aa12.35□□□□□ -0.43
PHRF1-203ENST00000416188 IGHV3-16A0A0C4DH30 117 aa12.34□□□□□ -0.43
PHRF1-203ENST00000416188 SNHG12Q9BXW3 62 aa12.34□□□□□ -0.43
PHRF1-203ENST00000416188 C10orf91Q5T1B1 145 aa12.34□□□□□ -0.43
PHRF1-203ENST00000416188 FAM104BQ5XKR9 115 aa12.34□□□□□ -0.43
PHRF1-203ENST00000416188 ZNF625Q96I27 306 aaPredicted RBP12.34□□□□□ -0.43
PHRF1-203ENST00000416188 CFHR3Q02985 330 aa12.34□□□□□ -0.43
PHRF1-203ENST00000416188 LOXL1Q08397 574 aaPredicted RBP12.34□□□□□ -0.43
PHRF1-203ENST00000416188 KIR3DS1Q14943 382 aa12.34□□□□□ -0.43
PHRF1-203ENST00000416188 ESDP10768 282 aa12.34□□□□□ -0.43
PHRF1-203ENST00000416188 TRPT1Q86TN4 253 aaKnown RBP12.34□□□□□ -0.43
PHRF1-203ENST00000416188 SIGMAR1Q99720 223 aa12.34□□□□□ -0.43
PHRF1-203ENST00000416188 MYMXA0A1B0GTQ4 84 aa12.33□□□□□ -0.44
PHRF1-203ENST00000416188 FAM231BA6NCW3 169 aa12.33□□□□□ -0.44
PHRF1-203ENST00000416188 IGLV3-1P01715 115 aa12.33□□□□□ -0.44
PHRF1-203ENST00000416188 OR11H6Q8NGC7 330 aa12.33□□□□□ -0.44
PHRF1-203ENST00000416188 PRR25Q96S07 402 aa12.33□□□□□ -0.44
PHRF1-203ENST00000416188 TP53TG1Q9Y2A0 90 aa12.33□□□□□ -0.44
PHRF1-203ENST00000416188 C2orf66Q6UXQ4 117 aa12.33□□□□□ -0.44
PHRF1-203ENST00000416188 ZNF114Q8NC26 417 aa12.33□□□□□ -0.44
PHRF1-203ENST00000416188 GAGE12JA6NER3 117 aa12.33□□□□□ -0.44
PHRF1-203ENST00000416188 PRSS46E5RG02 174 aa12.33□□□□□ -0.44
PHRF1-203ENST00000416188 DAD1P61803 113 aa12.33□□□□□ -0.44
PHRF1-203ENST00000416188 GAGE1Q13065 139 aa12.33□□□□□ -0.44
PHRF1-203ENST00000416188 GAGE4Q13068 117 aa12.33□□□□□ -0.44
PHRF1-203ENST00000416188 GAGE5Q13069 117 aa12.33□□□□□ -0.44
PHRF1-203ENST00000416188 CHAC1Q9BUX1 264 aa12.33□□□□□ -0.44
PHRF1-203ENST00000416188 CT83Q5H943 113 aa12.32□□□□□ -0.44
PHRF1-203ENST00000416188 HIVEP3Q5T1R4 2406 aa12.32□□□□□ -0.44
PHRF1-203ENST00000416188 PIEZO2Q9H5I5 2752 aa12.32□□□□□ -0.44
PHRF1-203ENST00000416188 TRAV12-2A0A075B6T6 113 aa12.32□□□□□ -0.44
PHRF1-203ENST00000416188 NDUFA4O00483 81 aa12.32□□□□□ -0.44
PHRF1-203ENST00000416188 IGFBPL1Q8WX77 278 aa12.32□□□□□ -0.44
PHRF1-203ENST00000416188 LHBP01229 141 aa12.32□□□□□ -0.44
PHRF1-203ENST00000416188 UBE2V1Q13404 147 aa12.32□□□□□ -0.44
PHRF1-203ENST00000416188 DEFB136Q30KP8 78 aa12.32□□□□□ -0.44
PHRF1-203ENST00000416188 F5H768 121 aa12.31□□□□□ -0.44
PHRF1-203ENST00000416188 IGLC1P0CG04 106 aa12.31□□□□□ -0.44
PHRF1-203ENST00000416188 C9orf66Q5T8R8 295 aa12.31□□□□□ -0.44
PHRF1-203ENST00000416188 ASPHD1Q5U4P2 390 aa12.31□□□□□ -0.44
PHRF1-203ENST00000416188 PRSS57Q6UWY2 283 aa12.31□□□□□ -0.44
PHRF1-203ENST00000416188 LAMTOR3Q9UHA4 124 aa12.31□□□□□ -0.44
PHRF1-203ENST00000416188 INAFM1C9JVW0 142 aa12.31□□□□□ -0.44
PHRF1-203ENST00000416188 ZFP36P26651 326 aaKnown RBP12.31□□□□□ -0.44
PHRF1-203ENST00000416188 H3BRN7 92 aa12.31□□□□□ -0.44
PHRF1-203ENST00000416188 BLCAPP62952 87 aa12.31□□□□□ -0.44
PHRF1-203ENST00000416188 SLAQ13239 276 aa12.3□□□□□ -0.44
PHRF1-203ENST00000416188 C2orf82Q6UX34 121 aa12.3□□□□□ -0.44
PHRF1-203ENST00000416188 V9GYV3 84 aa12.3□□□□□ -0.44
PHRF1-203ENST00000416188 RHODO00212 210 aa12.3□□□□□ -0.44
PHRF1-203ENST00000416188 SS18Q15532 418 aa12.3□□□□□ -0.44
PHRF1-203ENST00000416188 ANXA2RQ3ZCQ2 193 aa12.3□□□□□ -0.44
PHRF1-203ENST00000416188 DLX4Q92988 240 aaPredicted RBP12.3□□□□□ -0.44
PHRF1-203ENST00000416188 ANAPC13Q9BS18 74 aa12.3□□□□□ -0.44
PHRF1-203ENST00000416188 TNCP24821 2201 aa12.3□□□□□ -0.44
PHRF1-203ENST00000416188 IGHV1OR15-1A0A075B7D0 117 aa12.3□□□□□ -0.44
PHRF1-203ENST00000416188 TRAV26-2A0A0B4J265 109 aa12.3□□□□□ -0.44
PHRF1-203ENST00000416188 H3BUA1 57 aa12.29□□□□□ -0.44
PHRF1-203ENST00000416188 CLPSL1A2RUU4 121 aa12.29□□□□□ -0.44
PHRF1-203ENST00000416188 LEPROTO15243 131 aa12.29□□□□□ -0.44
PHRF1-203ENST00000416188 MRPL51Q4U2R6 128 aaKnown RBP12.29□□□□□ -0.44
PHRF1-203ENST00000416188 TRAV8-3A0A0A6YYJ7 113 aa12.29□□□□□ -0.44
PHRF1-203ENST00000416188 SDHAF1A6NFY7 115 aa12.29□□□□□ -0.44
PHRF1-203ENST00000416188 HOXD3P31249 432 aaPredicted RBP12.29□□□□□ -0.44
PHRF1-203ENST00000416188 LGALS1P09382 135 aaKnown RBP12.28□□□□□ -0.44
PHRF1-203ENST00000416188 INS-IGF2F8WCM5 200 aa12.28□□□□□ -0.44
PHRF1-203ENST00000416188 TMEM14CQ9P0S9 112 aa12.28□□□□□ -0.44
PHRF1-203ENST00000416188 OBSL1O75147 1896 aa12.28□□□□□ -0.44
PHRF1-203ENST00000416188 CDKN1BP46527 198 aa12.28□□□□□ -0.44
PHRF1-203ENST00000416188 FOXE3Q13461 319 aa12.28□□□□□ -0.44
PHRF1-203ENST00000416188 FAM231DQ6ZW35 169 aa12.28□□□□□ -0.44
PHRF1-203ENST00000416188 C20orf144Q9BQM9 153 aa12.28□□□□□ -0.44
PHRF1-203ENST00000416188 Q8N8P6 123 aa12.27□□□□□ -0.44
PHRF1-203ENST00000416188 C8orf31Q8N9H6 132 aa12.27□□□□□ -0.44
PHRF1-203ENST00000416188 GAGE2BQ13066 116 aa12.27□□□□□ -0.44
PHRF1-203ENST00000416188 GAGE2EQ4V326 116 aa12.27□□□□□ -0.44
PHRF1-203ENST00000416188 NEGR1Q7Z3B1 354 aa12.27□□□□□ -0.44
PHRF1-203ENST00000416188 GAGE2DQ9UEU5 116 aa12.27□□□□□ -0.44
PHRF1-203ENST00000416188 GAGE12BA1L429 117 aa12.27□□□□□ -0.45
PHRF1-203ENST00000416188 GAGE7O76087 117 aa12.27□□□□□ -0.45
PHRF1-203ENST00000416188 GAGE12FP0CL80 117 aa12.27□□□□□ -0.45
PHRF1-203ENST00000416188 GAGE12GP0CL81 117 aa12.27□□□□□ -0.45
PHRF1-203ENST00000416188 GAGE12IP0CL82 117 aa12.27□□□□□ -0.45
PHRF1-203ENST00000416188 FXYD5Q96DB9 178 aa12.27□□□□□ -0.45
PHRF1-203ENST00000416188 ZC2HC1AQ96GY0 325 aa12.27□□□□□ -0.45
PHRF1-203ENST00000416188 CD5LO43866 347 aa12.27□□□□□ -0.45
PHRF1-203ENST00000416188 OCIAD2Q56VL3 154 aa12.27□□□□□ -0.45
PHRF1-203ENST00000416188 IGHV3-38A0A0C4DH36 116 aa12.26□□□□□ -0.45
PHRF1-203ENST00000416188 SPAG8Q99932 426 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms