RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 C9orf66Q5T8R8 295 aa3.63□□□□□ -1.83
PTPN13-202ENST00000411767 Q6Q795 121 aa3.63□□□□□ -1.83
PTPN13-202ENST00000411767 FAM30AQ9NZY2 134 aa3.63□□□□□ -1.83
PTPN13-202ENST00000411767 STRCP1A6NGW2 1772 aa3.63□□□□□ -1.83
PTPN13-202ENST00000411767 ASXL3Q9C0F0 2248 aa3.63□□□□□ -1.83
PTPN13-202ENST00000411767 IGLV3-27P01718 113 aa3.63□□□□□ -1.83
PTPN13-202ENST00000411767 IGLC6P0CF74 106 aa3.63□□□□□ -1.83
PTPN13-202ENST00000411767 IGLC1P0CG04 106 aa3.63□□□□□ -1.83
PTPN13-202ENST00000411767 COX7CP15954 63 aa3.63□□□□□ -1.83
PTPN13-202ENST00000411767 FHL2Q14192 279 aa3.63□□□□□ -1.83
PTPN13-202ENST00000411767 ZFAND3Q9H8U3 227 aa3.63□□□□□ -1.83
PTPN13-202ENST00000411767 IGHV3-16A0A0C4DH30 117 aa3.63□□□□□ -1.83
PTPN13-202ENST00000411767 LINC00322Q6ZN03 302 aaPredicted RBP3.63□□□□□ -1.83
PTPN13-202ENST00000411767 DEFB123Q8N688 67 aa3.63□□□□□ -1.83
PTPN13-202ENST00000411767 Q8NFD4 153 aa3.63□□□□□ -1.83
PTPN13-202ENST00000411767 AGPAT4-IT1Q9H0P7 198 aa3.63□□□□□ -1.83
PTPN13-202ENST00000411767 A0A087WZ39 114 aa3.63□□□□□ -1.83
PTPN13-202ENST00000411767 LRCOL1A6NCL2 159 aa3.63□□□□□ -1.83
PTPN13-202ENST00000411767 LINC00474Q9P2X8 69 aa3.63□□□□□ -1.83
PTPN13-202ENST00000411767 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.63□□□□□ -1.83
PTPN13-202ENST00000411767 TRBV7-7A0A0K0K1E9 115 aa3.63□□□□□ -1.83
PTPN13-202ENST00000411767 EFNA2O43921 213 aa3.63□□□□□ -1.83
PTPN13-202ENST00000411767 LINC00271P0C7V0 271 aa3.63□□□□□ -1.83
PTPN13-202ENST00000411767 PKD1L3Q7Z443 1732 aa3.63□□□□□ -1.83
PTPN13-202ENST00000411767 SIRPDQ9H106 197 aa3.63□□□□□ -1.83
PTPN13-202ENST00000411767 VPREB3Q9UKI3 123 aa3.63□□□□□ -1.83
PTPN13-202ENST00000411767 A0A087WV48 116 aa3.63□□□□□ -1.83
PTPN13-202ENST00000411767 IGKV1-6A0A0C4DH72 117 aa3.63□□□□□ -1.83
PTPN13-202ENST00000411767 NDUFA11Q86Y39 141 aa3.63□□□□□ -1.83
PTPN13-202ENST00000411767 C8orf17Q9NRJ1 99 aa3.63□□□□□ -1.83
PTPN13-202ENST00000411767 SMKR1H3BMG3 65 aa3.62□□□□□ -1.83
PTPN13-202ENST00000411767 ZNF702PQ9H963 129 aa3.62□□□□□ -1.83
PTPN13-202ENST00000411767 BCL9LQ86UU0 1499 aa3.62□□□□□ -1.83
PTPN13-202ENST00000411767 TRAV7A0A075B6U4 112 aa3.62□□□□□ -1.83
PTPN13-202ENST00000411767 Q6ZQT7 251 aa3.62□□□□□ -1.83
PTPN13-202ENST00000411767 LHFPL1Q86WI0 220 aa3.62□□□□□ -1.83
PTPN13-202ENST00000411767 DCANP1Q8TF63 244 aa3.62□□□□□ -1.83
PTPN13-202ENST00000411767 Q9BRP9 147 aa3.62□□□□□ -1.83
PTPN13-202ENST00000411767 C17orf98A8MV24 154 aa3.62□□□□□ -1.83
PTPN13-202ENST00000411767 ZNF726P1Q15940 193 aa3.62□□□□□ -1.83
PTPN13-202ENST00000411767 KNTC1P50748 2209 aa3.62□□□□□ -1.83
PTPN13-202ENST00000411767 MYH1P12882 1939 aa3.62□□□□□ -1.83
PTPN13-202ENST00000411767 MYH4Q9Y623 1939 aa3.62□□□□□ -1.83
PTPN13-202ENST00000411767 SOSTDC1Q6X4U4 206 aa3.62□□□□□ -1.83
PTPN13-202ENST00000411767 ADCYAP1P18509 176 aa3.62□□□□□ -1.83
PTPN13-202ENST00000411767 PRLHP81277 87 aa3.62□□□□□ -1.83
PTPN13-202ENST00000411767 LINC00483Q53H64 154 aa3.62□□□□□ -1.83
PTPN13-202ENST00000411767 CD164L2Q6UWJ8 174 aa3.62□□□□□ -1.83
PTPN13-202ENST00000411767 C17orf100A8MU93 164 aa3.62□□□□□ -1.83
PTPN13-202ENST00000411767 RNASE3P12724 160 aaKnown RBP3.62□□□□□ -1.83
PTPN13-202ENST00000411767 BRD3OSQ6XYD6 125 aa3.62□□□□□ -1.83
PTPN13-202ENST00000411767 HIGD1BQ9P298 99 aa3.62□□□□□ -1.83
PTPN13-202ENST00000411767 Q6P435 159 aa3.62□□□□□ -1.83
PTPN13-202ENST00000411767 HRCT1Q6UXD1 115 aa3.62□□□□□ -1.83
PTPN13-202ENST00000411767 IGKV1D-37A0A075B6S9 117 aa3.61□□□□□ -1.83
PTPN13-202ENST00000411767 HCRTO43612 131 aa3.61□□□□□ -1.83
PTPN13-202ENST00000411767 WDR86Q86TI4 376 aa3.61□□□□□ -1.83
PTPN13-202ENST00000411767 SHANK2-AS3Q9BTD1 123 aa3.61□□□□□ -1.83
PTPN13-202ENST00000411767 ZNFX1Q9P2E3 1918 aaKnown RBP3.61□□□□□ -1.83
PTPN13-202ENST00000411767 IGHV3-38A0A0C4DH36 116 aa3.61□□□□□ -1.83
PTPN13-202ENST00000411767 PLA2G10O15496 165 aa3.61□□□□□ -1.83
PTPN13-202ENST00000411767 ESRGQ1W209 222 aa3.61□□□□□ -1.83
PTPN13-202ENST00000411767 PRSS57Q6UWY2 283 aa3.61□□□□□ -1.83
PTPN13-202ENST00000411767 PATE2Q6UY27 113 aa3.61□□□□□ -1.83
PTPN13-202ENST00000411767 SSBP3-AS1Q7Z2R9 100 aa3.61□□□□□ -1.83
PTPN13-202ENST00000411767 IGKV1D-13A0A0B4J2D9 117 aa3.61□□□□□ -1.83
PTPN13-202ENST00000411767 SHISA3A0PJX4 238 aa3.61□□□□□ -1.83
PTPN13-202ENST00000411767 IGKV1-13P0DP09 117 aa3.61□□□□□ -1.83
PTPN13-202ENST00000411767 C10orf25Q5T742 122 aa3.61□□□□□ -1.83
PTPN13-202ENST00000411767 SPINK6Q6UWN8 80 aa3.61□□□□□ -1.83
PTPN13-202ENST00000411767 H3BS24 57 aa3.61□□□□□ -1.83
PTPN13-202ENST00000411767 WFDC13Q8IUB5 93 aa3.61□□□□□ -1.83
PTPN13-202ENST00000411767 LAMB4A4D0S4 1761 aa3.61□□□□□ -1.83
PTPN13-202ENST00000411767 K7EMT4 169 aa3.61□□□□□ -1.83
PTPN13-202ENST00000411767 SPINK13Q1W4C9 94 aa3.61□□□□□ -1.83
PTPN13-202ENST00000411767 CLLU1OSQ5K130 101 aa3.61□□□□□ -1.83
PTPN13-202ENST00000411767 VMO1Q7Z5L0 202 aa3.61□□□□□ -1.83
PTPN13-202ENST00000411767 CCKP06307 115 aa3.61□□□□□ -1.83
PTPN13-202ENST00000411767 KLK12Q9UKR0 248 aa3.61□□□□□ -1.83
PTPN13-202ENST00000411767 ANKRD31Q8N7Z5 1873 aa3.61□□□□□ -1.83
PTPN13-202ENST00000411767 J3QLI3 93 aa3.6□□□□□ -1.83
PTPN13-202ENST00000411767 UCN2Q96RP3 112 aa3.6□□□□□ -1.83
PTPN13-202ENST00000411767 A0A0J9YY99 117 aa3.6□□□□□ -1.83
PTPN13-202ENST00000411767 PRR19A6NJB7 356 aa3.6□□□□□ -1.83
PTPN13-202ENST00000411767 LINC01565O15544 149 aa3.6□□□□□ -1.83
PTPN13-202ENST00000411767 EFNA4P52798 201 aa3.6□□□□□ -1.83
PTPN13-202ENST00000411767 QRFPP83859 136 aa3.6□□□□□ -1.83
PTPN13-202ENST00000411767 NEXN-AS1Q8NBZ9 246 aa3.6□□□□□ -1.83
PTPN13-202ENST00000411767 TPSG1Q9NRR2 321 aa3.6□□□□□ -1.83
PTPN13-202ENST00000411767 MORN2Q502X0 79 aa3.6□□□□□ -1.83
PTPN13-202ENST00000411767 REPIN1Q9BWE0 567 aaKnown RBP3.6□□□□□ -1.83
PTPN13-202ENST00000411767 UBR2Q8IWV8 1755 aa3.6□□□□□ -1.83
PTPN13-202ENST00000411767 IGHV3-33P01772 117 aa3.6□□□□□ -1.83
PTPN13-202ENST00000411767 IGHV3-30-3P0DP02 117 aa3.6□□□□□ -1.83
PTPN13-202ENST00000411767 SAA4P35542 130 aa3.6□□□□□ -1.83
PTPN13-202ENST00000411767 ALKAL1Q6UXT8 129 aa3.6□□□□□ -1.83
PTPN13-202ENST00000411767 Q8TAT8 98 aa3.6□□□□□ -1.83
PTPN13-202ENST00000411767 LENEPQ9Y5L5 61 aa3.6□□□□□ -1.83
PTPN13-202ENST00000411767 IGLV1-36A0A0B4J1U3 117 aa3.6□□□□□ -1.83
PTPN13-202ENST00000411767 IGHV7-81A0A0B4J1V7 117 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms