RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 C8orf86Q6ZUL3 223 aa12.8□□□□□ -0.36
LIMS2-208ENST00000410011 PCP2Q8IVA1 136 aa12.8□□□□□ -0.36
LIMS2-208ENST00000410011 SPTBN2O15020 2390 aa12.8□□□□□ -0.36
LIMS2-208ENST00000410011 CRIP2P52943 208 aaPredicted RBP12.8□□□□□ -0.36
LIMS2-208ENST00000410011 AP1S3Q96PC3 154 aa12.8□□□□□ -0.36
LIMS2-208ENST00000410011 A0A1W2PPR1 153 aa12.79□□□□□ -0.36
LIMS2-208ENST00000410011 NMUP48645 174 aa12.79□□□□□ -0.36
LIMS2-208ENST00000410011 LMO4P61968 165 aa12.79□□□□□ -0.36
LIMS2-208ENST00000410011 C5orf56Q8N8D9 126 aa12.79□□□□□ -0.36
LIMS2-208ENST00000410011 G3V318 75 aa12.79□□□□□ -0.36
LIMS2-208ENST00000410011 IGKCP01834 107 aa12.79□□□□□ -0.36
LIMS2-208ENST00000410011 NRACQ8N912 160 aa12.79□□□□□ -0.36
LIMS2-208ENST00000410011 C18orf15Q96N68 181 aa12.79□□□□□ -0.36
LIMS2-208ENST00000410011 TACC2O95359 2948 aa12.79□□□□□ -0.36
LIMS2-208ENST00000410011 PRSS1P07477 247 aa12.78□□□□□ -0.36
LIMS2-208ENST00000410011 ATP5G2Q06055 141 aa12.78□□□□□ -0.36
LIMS2-208ENST00000410011 C19orf54Q5BKX5 351 aa12.78□□□□□ -0.36
LIMS2-208ENST00000410011 TMEM158Q8WZ71 300 aa12.78□□□□□ -0.36
LIMS2-208ENST00000410011 FAM223BA6NKX1 122 aa12.78□□□□□ -0.36
LIMS2-208ENST00000410011 NPFFO15130 113 aa12.78□□□□□ -0.36
LIMS2-208ENST00000410011 FAM223AQ8IWN6 122 aa12.78□□□□□ -0.36
LIMS2-208ENST00000410011 MUC6Q6W4X9 2439 aa12.78□□□□□ -0.36
LIMS2-208ENST00000410011 LINC01548A6NM66 108 aa12.77□□□□□ -0.36
LIMS2-208ENST00000410011 DPM2O94777 84 aa12.77□□□□□ -0.36
LIMS2-208ENST00000410011 PPIFP30405 207 aaKnown RBP12.77□□□□□ -0.36
LIMS2-208ENST00000410011 UQCRFS1P47985 274 aa12.77□□□□□ -0.36
LIMS2-208ENST00000410011 IGHV3-66A0A0C4DH42 116 aa12.77□□□□□ -0.37
LIMS2-208ENST00000410011 A0A0G2JLM5 398 aa12.77□□□□□ -0.37
LIMS2-208ENST00000410011 K7ERU9 68 aa12.77□□□□□ -0.37
LIMS2-208ENST00000410011 SMIM17P0DL12 118 aa12.77□□□□□ -0.37
LIMS2-208ENST00000410011 GATA1P15976 413 aaPredicted RBP12.77□□□□□ -0.37
LIMS2-208ENST00000410011 LAGE3Q14657 143 aa12.77□□□□□ -0.37
LIMS2-208ENST00000410011 WFDC3Q8IUB2 231 aa12.77□□□□□ -0.37
LIMS2-208ENST00000410011 K7EP34 96 aa12.76□□□□□ -0.37
LIMS2-208ENST00000410011 C9orf139Q6ZV77 190 aa12.76□□□□□ -0.37
LIMS2-208ENST00000410011 GLMPQ8WWB7 406 aa12.76□□□□□ -0.37
LIMS2-208ENST00000410011 ITLN2Q8WWU7 325 aaPredicted RBP12.76□□□□□ -0.37
LIMS2-208ENST00000410011 MRAP2Q96G30 205 aa12.76□□□□□ -0.37
LIMS2-208ENST00000410011 PTPRZ1P23471 2315 aaPredicted RBP12.76□□□□□ -0.37
LIMS2-208ENST00000410011 DCHS2Q6V1P9 2916 aa12.76□□□□□ -0.37
LIMS2-208ENST00000410011 WNK2Q9Y3S1 2297 aa12.76□□□□□ -0.37
LIMS2-208ENST00000410011 TRGV3P03979 118 aa12.76□□□□□ -0.37
LIMS2-208ENST00000410011 SRSF1Q07955 248 aaKnown RBP eCLIP12.76□□□□□ -0.37
LIMS2-208ENST00000410011 MYOZ3Q8TDC0 251 aa12.76□□□□□ -0.37
LIMS2-208ENST00000410011 BRI3O95415 125 aa12.75□□□□□ -0.37
LIMS2-208ENST00000410011 LINC00477Q96M19 166 aa12.75□□□□□ -0.37
LIMS2-208ENST00000410011 IGKV2D-26A0A0A0MRZ7 120 aa12.74□□□□□ -0.37
LIMS2-208ENST00000410011 H3BUT2 72 aa12.74□□□□□ -0.37
LIMS2-208ENST00000410011 JMJD8Q96S16 334 aa12.74□□□□□ -0.37
LIMS2-208ENST00000410011 RAXQ9Y2V3 346 aa12.74□□□□□ -0.37
LIMS2-208ENST00000410011 OR5A1Q8NGJ0 315 aa12.74□□□□□ -0.37
LIMS2-208ENST00000410011 FOXC2Q99958 501 aa12.74□□□□□ -0.37
LIMS2-208ENST00000410011 MOB4Q9Y3A3 225 aa12.74□□□□□ -0.37
LIMS2-208ENST00000410011 LRBAP50851 2863 aa12.74□□□□□ -0.37
LIMS2-208ENST00000410011 TRAV41A0A0B4J266 112 aa12.73□□□□□ -0.37
LIMS2-208ENST00000410011 K7EMI3 77 aa12.73□□□□□ -0.37
LIMS2-208ENST00000410011 SPANXN1Q5VSR9 72 aa12.73□□□□□ -0.37
LIMS2-208ENST00000410011 C16orf92Q96LL3 132 aa12.73□□□□□ -0.37
LIMS2-208ENST00000410011 BPESC1Q9GZL8 116 aa12.73□□□□□ -0.37
LIMS2-208ENST00000410011 IGHV3OR16-13A0A075B7E8 117 aa12.73□□□□□ -0.37
LIMS2-208ENST00000410011 IGHV3-74A0A0B4J1X5 117 aa12.73□□□□□ -0.37
LIMS2-208ENST00000410011 A0A1W2PPM0 123 aa12.73□□□□□ -0.37
LIMS2-208ENST00000410011 TMEM8BA6NDV4 472 aa12.73□□□□□ -0.37
LIMS2-208ENST00000410011 SMIM13P0DJ93 91 aa12.73□□□□□ -0.37
LIMS2-208ENST00000410011 TM2D2Q9BX73 214 aa12.73□□□□□ -0.37
LIMS2-208ENST00000410011 A0A087WX48 190 aa12.72□□□□□ -0.37
LIMS2-208ENST00000410011 RNF151Q2KHN1 245 aa12.72□□□□□ -0.37
LIMS2-208ENST00000410011 ZC2HC1BQ5TFG8 222 aa12.72□□□□□ -0.37
LIMS2-208ENST00000410011 SPTA1P02549 2419 aa12.72□□□□□ -0.37
LIMS2-208ENST00000410011 TCTAP57738 103 aa12.72□□□□□ -0.37
LIMS2-208ENST00000410011 TRBV25-1A0A075B6N4 114 aa12.71□□□□□ -0.37
LIMS2-208ENST00000410011 TRAV12-1A0A0B4J245 112 aa12.71□□□□□ -0.37
LIMS2-208ENST00000410011 NDUFA4O00483 81 aa12.71□□□□□ -0.37
LIMS2-208ENST00000410011 OVOL1O14753 267 aa12.71□□□□□ -0.37
LIMS2-208ENST00000410011 MED14OSP0DP75 135 aa12.71□□□□□ -0.37
LIMS2-208ENST00000410011 CHAC1Q9BUX1 264 aa12.71□□□□□ -0.37
LIMS2-208ENST00000410011 UBTD1Q9HAC8 227 aa12.71□□□□□ -0.37
LIMS2-208ENST00000410011 ZNF207O43670 478 aaKnown RBP12.71□□□□□ -0.38
LIMS2-208ENST00000410011 PLNP26678 52 aa12.71□□□□□ -0.38
LIMS2-208ENST00000410011 TAL2Q16559 108 aa12.71□□□□□ -0.38
LIMS2-208ENST00000410011 C21orf62-AS1Q17RA5 79 aa12.71□□□□□ -0.38
LIMS2-208ENST00000410011 C20orf78Q9BR46 151 aa12.71□□□□□ -0.38
LIMS2-208ENST00000410011 HRNRQ86YZ3 2850 aaPredicted RBP12.7□□□□□ -0.38
LIMS2-208ENST00000410011 IGHV3-49A0A0A0MS15 119 aa12.7□□□□□ -0.38
LIMS2-208ENST00000410011 TRBV7-9A0A0J9YWB2 115 aa12.7□□□□□ -0.38
LIMS2-208ENST00000410011 H3BUA1 57 aa12.7□□□□□ -0.38
LIMS2-208ENST00000410011 IGF1P05019 195 aa12.7□□□□□ -0.38
LIMS2-208ENST00000410011 SLC25A16P16260 332 aa12.7□□□□□ -0.38
LIMS2-208ENST00000410011 MEGF9Q9H1U4 602 aa12.7□□□□□ -0.38
LIMS2-208ENST00000410011 MRPL35Q9NZE8 188 aaKnown RBP12.7□□□□□ -0.38
LIMS2-208ENST00000410011 UFC1Q9Y3C8 167 aa12.7□□□□□ -0.38
LIMS2-208ENST00000410011 TRAV21A0A0B4J279 112 aa12.7□□□□□ -0.38
LIMS2-208ENST00000410011 TRAV40A0A0B4J280 105 aa12.7□□□□□ -0.38
LIMS2-208ENST00000410011 SOCS3O14543 225 aa12.7□□□□□ -0.38
LIMS2-208ENST00000410011 ARL3P36405 182 aa12.7□□□□□ -0.38
LIMS2-208ENST00000410011 GTSCR1Q86UQ5 136 aa12.7□□□□□ -0.38
LIMS2-208ENST00000410011 ZFAND2AQ8N6M9 145 aa12.7□□□□□ -0.38
LIMS2-208ENST00000410011 VPS25Q9BRG1 176 aa12.7□□□□□ -0.38
LIMS2-208ENST00000410011 SMIM2Q9BVW6 85 aa12.7□□□□□ -0.38
LIMS2-208ENST00000410011 CEP295Q9C0D2 2601 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms