RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 Q9H3A6 140 aa10.16□□□□□ -0.78
NIF3L1-205ENST00000409588 IGLV2-18A0A075B6J9 118 aa10.15□□□□□ -0.78
NIF3L1-205ENST00000409588 TRGV2A0A075B6R0 118 aa10.15□□□□□ -0.78
NIF3L1-205ENST00000409588 IGHV1OR15-1A0A075B7D0 117 aa10.15□□□□□ -0.78
NIF3L1-205ENST00000409588 TRAV26-1A0A087WT03 109 aa10.15□□□□□ -0.78
NIF3L1-205ENST00000409588 TCL1AP56279 114 aa10.15□□□□□ -0.78
NIF3L1-205ENST00000409588 ZNRF2Q8NHG8 242 aa10.15□□□□□ -0.78
NIF3L1-205ENST00000409588 CMTM2Q8TAZ6 248 aa10.15□□□□□ -0.78
NIF3L1-205ENST00000409588 SMIM3Q9BZL3 60 aa10.15□□□□□ -0.78
NIF3L1-205ENST00000409588 MED28Q9H204 178 aa10.15□□□□□ -0.78
NIF3L1-205ENST00000409588 OTORQ9NRC9 128 aa10.15□□□□□ -0.78
NIF3L1-205ENST00000409588 GSN-AS1Q9NRJ2 163 aa10.15□□□□□ -0.78
NIF3L1-205ENST00000409588 ALG5Q9Y673 324 aa10.15□□□□□ -0.78
NIF3L1-205ENST00000409588 IGKV2-40A0A087WW87 121 aaPredicted RBP10.14□□□□□ -0.79
NIF3L1-205ENST00000409588 A0A1B0GVY2 172 aa10.14□□□□□ -0.79
NIF3L1-205ENST00000409588 DIRC3C9JPN6 131 aa10.14□□□□□ -0.79
NIF3L1-205ENST00000409588 SPINK4O60575 86 aa10.14□□□□□ -0.79
NIF3L1-205ENST00000409588 IGKV2D-40P01614 121 aaPredicted RBP10.14□□□□□ -0.79
NIF3L1-205ENST00000409588 MBP02144 154 aa10.14□□□□□ -0.79
NIF3L1-205ENST00000409588 BTF3P20290 206 aaKnown RBP10.14□□□□□ -0.79
NIF3L1-205ENST00000409588 SERF2P84101 59 aa10.14□□□□□ -0.79
NIF3L1-205ENST00000409588 BTN1A1Q13410 526 aa10.14□□□□□ -0.79
NIF3L1-205ENST00000409588 Q6ZTI0 123 aa10.14□□□□□ -0.79
NIF3L1-205ENST00000409588 PHYHIPLQ96FC7 376 aa10.14□□□□□ -0.79
NIF3L1-205ENST00000409588 ARPC5LQ9BPX5 153 aa10.14□□□□□ -0.79
NIF3L1-205ENST00000409588 HECTD4Q9Y4D8 3996 aa10.14□□□□□ -0.79
NIF3L1-205ENST00000409588 NBDYA0A0U1RRE5 68 aa10.13□□□□□ -0.79
NIF3L1-205ENST00000409588 SSX7Q7RTT5 188 aa10.13□□□□□ -0.79
NIF3L1-205ENST00000409588 OR10G4Q8NGN3 311 aa10.13□□□□□ -0.79
NIF3L1-205ENST00000409588 OR10G9Q8NGN4 311 aa10.13□□□□□ -0.79
NIF3L1-205ENST00000409588 OR10G7Q8NGN6 311 aa10.13□□□□□ -0.79
NIF3L1-205ENST00000409588 OR2G3Q8NGZ4 309 aa10.13□□□□□ -0.79
NIF3L1-205ENST00000409588 AQP10Q96PS8 301 aa10.13□□□□□ -0.79
NIF3L1-205ENST00000409588 PSMG3Q9BT73 122 aaPredicted RBP10.13□□□□□ -0.79
NIF3L1-205ENST00000409588 SSBP4Q9BWG4 385 aaPredicted RBP10.13□□□□□ -0.79
NIF3L1-205ENST00000409588 Q9H8V8 135 aa10.13□□□□□ -0.79
NIF3L1-205ENST00000409588 WFDC1Q9HC57 220 aa10.13□□□□□ -0.79
NIF3L1-205ENST00000409588 TP53TG3Q9ULZ0 132 aa10.13□□□□□ -0.79
NIF3L1-205ENST00000409588 LINC00588Q9Y4M8 146 aa10.13□□□□□ -0.79
NIF3L1-205ENST00000409588 KLF12Q9Y4X4 402 aa10.13□□□□□ -0.79
NIF3L1-205ENST00000409588 TRGV1A0A0A0MS02 117 aa10.12□□□□□ -0.79
NIF3L1-205ENST00000409588 SERTM2A0A1B0GWG4 89 aa10.12□□□□□ -0.79
NIF3L1-205ENST00000409588 PGPA6NDG6 321 aa10.12□□□□□ -0.79
NIF3L1-205ENST00000409588 HOXA5P20719 270 aa10.12□□□□□ -0.79
NIF3L1-205ENST00000409588 Q6AWC8 147 aa10.12□□□□□ -0.79
NIF3L1-205ENST00000409588 ST6GAL2Q96JF0 529 aa10.12□□□□□ -0.79
NIF3L1-205ENST00000409588 SPXQ9BT56 116 aa10.12□□□□□ -0.79
NIF3L1-205ENST00000409588 UPK3BQ9BT76 320 aa10.12□□□□□ -0.79
NIF3L1-205ENST00000409588 A0A1W2PPQ1 181 aa10.11□□□□□ -0.79
NIF3L1-205ENST00000409588 ZNF415Q09FC8 603 aa10.11□□□□□ -0.79
NIF3L1-205ENST00000409588 TTC32Q5I0X7 151 aa10.11□□□□□ -0.79
NIF3L1-205ENST00000409588 FAM159AQ6UWV7 190 aa10.11□□□□□ -0.79
NIF3L1-205ENST00000409588 INO80EQ8NBZ0 244 aaPredicted RBP10.11□□□□□ -0.79
NIF3L1-205ENST00000409588 TMPRSS5Q9H3S3 457 aa10.11□□□□□ -0.79
NIF3L1-205ENST00000409588 GIPP09681 153 aaPredicted RBP10.1□□□□□ -0.79
NIF3L1-205ENST00000409588 TDRG1Q3Y452 100 aa10.1□□□□□ -0.79
NIF3L1-205ENST00000409588 C6orf223Q8N319 242 aa10.1□□□□□ -0.79
NIF3L1-205ENST00000409588 PRO0255Q9UI72 69 aa10.1□□□□□ -0.79
NIF3L1-205ENST00000409588 TNFSF18Q9UNG2 199 aa10.1□□□□□ -0.79
NIF3L1-205ENST00000409588 DNAH2Q9P225 4427 aa10.1□□□□□ -0.79
NIF3L1-205ENST00000409588 TRGV11A0A075B6L2 103 aa10.09□□□□□ -0.79
NIF3L1-205ENST00000409588 A0A0J9YY99 117 aa10.09□□□□□ -0.79
NIF3L1-205ENST00000409588 FBLL1A6NHQ2 334 aaKnown RBP10.09□□□□□ -0.79
NIF3L1-205ENST00000409588 K7EQM0 130 aa10.09□□□□□ -0.79
NIF3L1-205ENST00000409588 STAG3L2P0CL84 134 aa10.09□□□□□ -0.79
NIF3L1-205ENST00000409588 STAG3L3P0CL85 134 aa10.09□□□□□ -0.79
NIF3L1-205ENST00000409588 MED14OSP0DP75 135 aa10.09□□□□□ -0.79
NIF3L1-205ENST00000409588 ESRGQ1W209 222 aa10.09□□□□□ -0.79
NIF3L1-205ENST00000409588 PRR9Q5T870 116 aa10.09□□□□□ -0.79
NIF3L1-205ENST00000409588 IQCF2Q8IXL9 164 aa10.09□□□□□ -0.79
NIF3L1-205ENST00000409588 SUN5Q8TC36 379 aa10.09□□□□□ -0.79
NIF3L1-205ENST00000409588 RASL10AQ92737 203 aa10.09□□□□□ -0.79
NIF3L1-205ENST00000409588 HYLS1Q96M11 299 aa10.09□□□□□ -0.79
NIF3L1-205ENST00000409588 NACAE9PAV3 2078 aa10.09□□□□□ -0.79
NIF3L1-205ENST00000409588 TRAV21A0A0B4J279 112 aa10.08□□□□□ -0.8
NIF3L1-205ENST00000409588 CDC34P49427 236 aaPredicted RBP10.08□□□□□ -0.8
NIF3L1-205ENST00000409588 Q8TAT8 98 aa10.08□□□□□ -0.8
NIF3L1-205ENST00000409588 VSIG2Q96IQ7 327 aa10.08□□□□□ -0.8
NIF3L1-205ENST00000409588 KCNS1Q96KK3 526 aa10.08□□□□□ -0.8
NIF3L1-205ENST00000409588 TMEM167BQ9NRX6 74 aa10.08□□□□□ -0.8
NIF3L1-205ENST00000409588 HHLA3Q9XRX5 114 aa10.08□□□□□ -0.8
NIF3L1-205ENST00000409588 MRPS16Q9Y3D3 137 aaKnown RBP10.08□□□□□ -0.8
NIF3L1-205ENST00000409588 DNAH17Q9UFH2 4485 aa10.08□□□□□ -0.8
NIF3L1-205ENST00000409588 FAT2Q9NYQ8 4349 aa10.07□□□□□ -0.8
NIF3L1-205ENST00000409588 BORCS7-ASMTA0A0B4J1R7 106 aa10.07□□□□□ -0.8
NIF3L1-205ENST00000409588 PAX4O43316 350 aa10.07□□□□□ -0.8
NIF3L1-205ENST00000409588 CXorf1O96002 111 aa10.07□□□□□ -0.8
NIF3L1-205ENST00000409588 RAB2AP61019 212 aa10.07□□□□□ -0.8
NIF3L1-205ENST00000409588 HSD17B11Q8NBQ5 300 aa10.07□□□□□ -0.8
NIF3L1-205ENST00000409588 RAB24Q969Q5 203 aa10.07□□□□□ -0.8
NIF3L1-205ENST00000409588 NDFIP1Q9BT67 221 aa10.07□□□□□ -0.8
NIF3L1-205ENST00000409588 ACTR3CQ9C0K3 210 aaPredicted RBP10.07□□□□□ -0.8
NIF3L1-205ENST00000409588 A0A096LPF7 62 aa10.06□□□□□ -0.8
NIF3L1-205ENST00000409588 KRTAP4-8A0A0G2JLE6 195 aa10.06□□□□□ -0.8
NIF3L1-205ENST00000409588 ATP6V0CP27449 155 aa10.06□□□□□ -0.8
NIF3L1-205ENST00000409588 MRPL23Q16540 153 aaKnown RBP10.06□□□□□ -0.8
NIF3L1-205ENST00000409588 GOLT1AQ6ZVE7 132 aa10.06□□□□□ -0.8
NIF3L1-205ENST00000409588 C5orf17Q8NAS9 161 aa10.06□□□□□ -0.8
NIF3L1-205ENST00000409588 TREM1Q9NP99 234 aa10.06□□□□□ -0.8
NIF3L1-205ENST00000409588 ICOSQ9Y6W8 199 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms