RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 C11orf21Q9P2W6 132 aa19.66■□□□□ 0.74
COL13A1-203ENST00000398969 A1L4Q6 167 aa19.65■□□□□ 0.74
COL13A1-203ENST00000398969 FCER1GP30273 86 aa19.65■□□□□ 0.74
COL13A1-203ENST00000398969 PCP4P48539 62 aa19.65■□□□□ 0.74
COL13A1-203ENST00000398969 SIVA1O15304 175 aa19.65■□□□□ 0.74
COL13A1-203ENST00000398969 GATA1P15976 413 aaPredicted RBP19.64■□□□□ 0.74
COL13A1-203ENST00000398969 CDKN1BP46527 198 aa19.64■□□□□ 0.74
COL13A1-203ENST00000398969 EFNA4P52798 201 aa19.64■□□□□ 0.74
COL13A1-203ENST00000398969 EEF1AKMT3Q96AZ1 226 aa19.64■□□□□ 0.74
COL13A1-203ENST00000398969 HSD52Q0P140 79 aa19.64■□□□□ 0.73
COL13A1-203ENST00000398969 PCP2Q8IVA1 136 aa19.64■□□□□ 0.73
COL13A1-203ENST00000398969 IGHV3-49A0A0A0MS15 119 aa19.63■□□□□ 0.73
COL13A1-203ENST00000398969 NMUP48645 174 aa19.63■□□□□ 0.73
COL13A1-203ENST00000398969 ADAMTSL5Q6ZMM2 481 aa19.63■□□□□ 0.73
COL13A1-203ENST00000398969 USP24Q9UPU5 2620 aa19.63■□□□□ 0.73
COL13A1-203ENST00000398969 CENPVL3A0A0U1RRI6 287 aa19.63■□□□□ 0.73
COL13A1-203ENST00000398969 METTL26Q96S19 204 aa19.63■□□□□ 0.73
COL13A1-203ENST00000398969 ZNF207O43670 478 aaKnown RBP19.62■□□□□ 0.73
COL13A1-203ENST00000398969 C21orf62-AS1Q17RA5 79 aa19.62■□□□□ 0.73
COL13A1-203ENST00000398969 TMEM78Q5T7P6 136 aa19.62■□□□□ 0.73
COL13A1-203ENST00000398969 C8orf86Q6ZUL3 223 aa19.62■□□□□ 0.73
COL13A1-203ENST00000398969 CST9LQ9H4G1 147 aa19.62■□□□□ 0.73
COL13A1-203ENST00000398969 TRBV7-1A0A0A6YYK4 115 aa19.62■□□□□ 0.73
COL13A1-203ENST00000398969 A6NDN8 102 aa19.62■□□□□ 0.73
COL13A1-203ENST00000398969 OR4X2Q8NGF9 303 aa19.62■□□□□ 0.73
COL13A1-203ENST00000398969 MRPL53Q96EL3 112 aaKnown RBP19.62■□□□□ 0.73
COL13A1-203ENST00000398969 SPTAN1Q13813 2472 aaKnown RBP19.61■□□□□ 0.73
COL13A1-203ENST00000398969 ODF1Q14990 250 aa19.61■□□□□ 0.73
COL13A1-203ENST00000398969 H3BRM9 83 aa19.6■□□□□ 0.73
COL13A1-203ENST00000398969 TRGV3P03979 118 aa19.6■□□□□ 0.73
COL13A1-203ENST00000398969 PIFOQ8TCI5 191 aa19.6■□□□□ 0.73
COL13A1-203ENST00000398969 ZMAT4Q9H898 229 aa19.6■□□□□ 0.73
COL13A1-203ENST00000398969 AKAP6Q13023 2319 aa19.6■□□□□ 0.73
COL13A1-203ENST00000398969 LMO4P61968 165 aa19.6■□□□□ 0.73
COL13A1-203ENST00000398969 U3KQE9 123 aa19.6■□□□□ 0.73
COL13A1-203ENST00000398969 IGHV7-4-1A0A0J9YVY3 117 aa19.59■□□□□ 0.73
COL13A1-203ENST00000398969 Q8N8P6 123 aa19.59■□□□□ 0.73
COL13A1-203ENST00000398969 IGLV2-18A0A075B6J9 118 aa19.59■□□□□ 0.73
COL13A1-203ENST00000398969 NPFFO15130 113 aa19.59■□□□□ 0.73
COL13A1-203ENST00000398969 C5orf56Q8N8D9 126 aa19.59■□□□□ 0.73
COL13A1-203ENST00000398969 MED13LQ71F56 2210 aa19.58■□□□□ 0.73
COL13A1-203ENST00000398969 C9orf47Q6ZRZ4 202 aa19.58■□□□□ 0.73
COL13A1-203ENST00000398969 OR2K2Q8NGT1 345 aa19.58■□□□□ 0.73
COL13A1-203ENST00000398969 TMEM158Q8WZ71 300 aa19.58■□□□□ 0.73
COL13A1-203ENST00000398969 BPESC1Q9GZL8 116 aa19.58■□□□□ 0.73
COL13A1-203ENST00000398969 HIF1ANQ9NWT6 349 aa19.58■□□□□ 0.73
COL13A1-203ENST00000398969 C9orf118A6NHY6 69 aa19.58■□□□□ 0.72
COL13A1-203ENST00000398969 HHLA3Q9XRX5 114 aa19.58■□□□□ 0.72
COL13A1-203ENST00000398969 KIR3DS1Q14943 382 aa19.57■□□□□ 0.72
COL13A1-203ENST00000398969 GAGE12BA1L429 117 aa19.56■□□□□ 0.72
COL13A1-203ENST00000398969 PRSS1P07477 247 aa19.56■□□□□ 0.72
COL13A1-203ENST00000398969 ATP5G2Q06055 141 aa19.56■□□□□ 0.72
COL13A1-203ENST00000398969 OCIAD2Q56VL3 154 aa19.56■□□□□ 0.72
COL13A1-203ENST00000398969 RNF151Q2KHN1 245 aa19.56■□□□□ 0.72
COL13A1-203ENST00000398969 Q6ZQT7 251 aa19.56■□□□□ 0.72
COL13A1-203ENST00000398969 JMJD8Q96S16 334 aa19.55■□□□□ 0.72
COL13A1-203ENST00000398969 COL12A1Q99715 3063 aa19.55■□□□□ 0.72
COL13A1-203ENST00000398969 IGKV2D-26A0A0A0MRZ7 120 aa19.55■□□□□ 0.72
COL13A1-203ENST00000398969 GAGE10A6NGK3 116 aa19.55■□□□□ 0.72
COL13A1-203ENST00000398969 PSMG4Q5JS54 123 aa19.55■□□□□ 0.72
COL13A1-203ENST00000398969 SMIM15Q7Z3B0 74 aa19.55■□□□□ 0.72
COL13A1-203ENST00000398969 NRACQ8N912 160 aa19.55■□□□□ 0.72
COL13A1-203ENST00000398969 AP1S3Q96PC3 154 aa19.55■□□□□ 0.72
COL13A1-203ENST00000398969 SVEP1Q4LDE5 3571 aa19.55■□□□□ 0.72
COL13A1-203ENST00000398969 DOPEY1Q5JWR5 2465 aa19.54■□□□□ 0.72
COL13A1-203ENST00000398969 PRB1P04280 392 aa19.54■□□□□ 0.72
COL13A1-203ENST00000398969 UFSP1Q6NVU6 142 aa19.54■□□□□ 0.72
COL13A1-203ENST00000398969 TMEM219Q86XT9 240 aa19.54■□□□□ 0.72
COL13A1-203ENST00000398969 FOXC2Q99958 501 aa19.54■□□□□ 0.72
COL13A1-203ENST00000398969 ASH1LQ9NR48 2969 aaKnown RBP19.54■□□□□ 0.72
COL13A1-203ENST00000398969 FLNCQ14315 2725 aa19.53■□□□□ 0.72
COL13A1-203ENST00000398969 PRSS47A8MTI9 375 aa19.53■□□□□ 0.72
COL13A1-203ENST00000398969 IGKCP01834 107 aa19.53■□□□□ 0.72
COL13A1-203ENST00000398969 UFC1Q9Y3C8 167 aa19.53■□□□□ 0.72
COL13A1-203ENST00000398969 IGHV4-4A0A075B6R2 117 aa19.53■□□□□ 0.72
COL13A1-203ENST00000398969 TRAV26-2A0A0B4J265 109 aa19.53■□□□□ 0.72
COL13A1-203ENST00000398969 H3BUT2 72 aa19.53■□□□□ 0.72
COL13A1-203ENST00000398969 ATP5LO75964 103 aa19.52■□□□□ 0.72
COL13A1-203ENST00000398969 SMIM17P0DL12 118 aa19.52■□□□□ 0.72
COL13A1-203ENST00000398969 C16orf92Q96LL3 132 aa19.52■□□□□ 0.72
COL13A1-203ENST00000398969 BBC3Q96PG8 261 aaPredicted RBP19.52■□□□□ 0.72
COL13A1-203ENST00000398969 TRAV41A0A0B4J266 112 aa19.51■□□□□ 0.71
COL13A1-203ENST00000398969 C19orf54Q5BKX5 351 aa19.51■□□□□ 0.71
COL13A1-203ENST00000398969 SMPXQ9UHP9 88 aa19.51■□□□□ 0.71
COL13A1-203ENST00000398969 USP9XQ93008 2570 aaPredicted RBP19.51■□□□□ 0.71
COL13A1-203ENST00000398969 ZFYVE26Q68DK2 2539 aa19.51■□□□□ 0.71
COL13A1-203ENST00000398969 GLMPQ8WWB7 406 aa19.51■□□□□ 0.71
COL13A1-203ENST00000398969 A0A0G2JLM5 398 aa19.5■□□□□ 0.71
COL13A1-203ENST00000398969 IGHV4-39P01824 125 aa19.5■□□□□ 0.71
COL13A1-203ENST00000398969 PRR9Q5T870 116 aa19.5■□□□□ 0.71
COL13A1-203ENST00000398969 SPANXN1Q5VSR9 72 aa19.5■□□□□ 0.71
COL13A1-203ENST00000398969 GTF2H5Q6ZYL4 71 aa19.5■□□□□ 0.71
COL13A1-203ENST00000398969 ATP6V0BQ99437 205 aa19.5■□□□□ 0.71
COL13A1-203ENST00000398969 NAA38Q9BRA0 125 aaKnown RBP19.5■□□□□ 0.71
COL13A1-203ENST00000398969 DPM2O94777 84 aa19.5■□□□□ 0.71
COL13A1-203ENST00000398969 LAGE3Q14657 143 aa19.5■□□□□ 0.71
COL13A1-203ENST00000398969 TTTY13Q9BZ97 58 aa19.5■□□□□ 0.71
COL13A1-203ENST00000398969 LINC00527Q9UJ94 153 aa19.5■□□□□ 0.71
COL13A1-203ENST00000398969 MOB4Q9Y3A3 225 aa19.5■□□□□ 0.71
COL13A1-203ENST00000398969 FAM223BA6NKX1 122 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms