RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 TAX1BP3O14907 124 aa9.15□□□□□ -0.95
UBE2D3-209ENST00000394804 IGFBPL1Q8WX77 278 aa9.15□□□□□ -0.95
UBE2D3-209ENST00000394804 CHAC1Q9BUX1 264 aa9.15□□□□□ -0.95
UBE2D3-209ENST00000394804 IGHV3-11P01762 117 aa9.14□□□□□ -0.95
UBE2D3-209ENST00000394804 RNASE4P34096 147 aaKnown RBP9.14□□□□□ -0.95
UBE2D3-209ENST00000394804 SAA4P35542 130 aa9.14□□□□□ -0.95
UBE2D3-209ENST00000394804 DPF1Q92782 380 aa9.14□□□□□ -0.95
UBE2D3-209ENST00000394804 VWC2LB2RUY7 222 aa9.14□□□□□ -0.95
UBE2D3-209ENST00000394804 OVOL1O14753 267 aa9.14□□□□□ -0.95
UBE2D3-209ENST00000394804 CRXO43186 299 aaPredicted RBP9.14□□□□□ -0.95
UBE2D3-209ENST00000394804 NDPQ00604 133 aa9.14□□□□□ -0.95
UBE2D3-209ENST00000394804 ARL6IP6Q8N6S5 226 aa9.14□□□□□ -0.95
UBE2D3-209ENST00000394804 Q8N8P6 123 aa9.14□□□□□ -0.95
UBE2D3-209ENST00000394804 PIMREGQ9BSJ6 248 aa9.14□□□□□ -0.95
UBE2D3-209ENST00000394804 C7orf69Q9H7B7 122 aa9.14□□□□□ -0.95
UBE2D3-209ENST00000394804 MOB4Q9Y3A3 225 aa9.14□□□□□ -0.95
UBE2D3-209ENST00000394804 EFNA4P52798 201 aa9.14□□□□□ -0.95
UBE2D3-209ENST00000394804 SYT8Q8NBV8 401 aa9.14□□□□□ -0.95
UBE2D3-209ENST00000394804 ZNF479Q96JC4 524 aa9.14□□□□□ -0.95
UBE2D3-209ENST00000394804 CHTOPQ9Y3Y2 248 aaKnown RBP9.14□□□□□ -0.95
UBE2D3-209ENST00000394804 SIVA1O15304 175 aa9.13□□□□□ -0.95
UBE2D3-209ENST00000394804 PLNP26678 52 aa9.13□□□□□ -0.95
UBE2D3-209ENST00000394804 KHDC1LQ5JSQ8 128 aa9.13□□□□□ -0.95
UBE2D3-209ENST00000394804 TMEM219Q86XT9 240 aa9.13□□□□□ -0.95
UBE2D3-209ENST00000394804 PSMB2P49721 201 aa9.13□□□□□ -0.95
UBE2D3-209ENST00000394804 RIPPLY3P57055 190 aa9.13□□□□□ -0.95
UBE2D3-209ENST00000394804 DKK2Q9UBU2 259 aa9.13□□□□□ -0.95
UBE2D3-209ENST00000394804 GRNP28799 593 aaKnown RBP9.13□□□□□ -0.95
UBE2D3-209ENST00000394804 UBE2E1P51965 193 aa9.13□□□□□ -0.95
UBE2D3-209ENST00000394804 SPATA12Q7Z6I5 190 aa9.13□□□□□ -0.95
UBE2D3-209ENST00000394804 DYNAPQ8N1N2 210 aa9.13□□□□□ -0.95
UBE2D3-209ENST00000394804 GLMPQ8WWB7 406 aa9.13□□□□□ -0.95
UBE2D3-209ENST00000394804 NPFFO15130 113 aa9.13□□□□□ -0.95
UBE2D3-209ENST00000394804 CDKN1BP46527 198 aa9.13□□□□□ -0.95
UBE2D3-209ENST00000394804 FAM74A4Q5TZK3 123 aa9.13□□□□□ -0.95
UBE2D3-209ENST00000394804 DTX2Q86UW9 622 aa9.13□□□□□ -0.95
UBE2D3-209ENST00000394804 MRPL16Q9NX20 251 aaKnown RBP9.13□□□□□ -0.95
UBE2D3-209ENST00000394804 TLN1Q9Y490 2541 aaKnown RBP9.12□□□□□ -0.95
UBE2D3-209ENST00000394804 TMEM8BA6NDV4 472 aa9.12□□□□□ -0.95
UBE2D3-209ENST00000394804 ZNF493Q6ZR52 646 aa9.12□□□□□ -0.95
UBE2D3-209ENST00000394804 C1orf122Q6ZSJ8 110 aa9.12□□□□□ -0.95
UBE2D3-209ENST00000394804 LINC00477Q96M19 166 aa9.12□□□□□ -0.95
UBE2D3-209ENST00000394804 USP24Q9UPU5 2620 aa9.12□□□□□ -0.95
UBE2D3-209ENST00000394804 TRAV40A0A0B4J280 105 aa9.12□□□□□ -0.95
UBE2D3-209ENST00000394804 G3V318 75 aa9.12□□□□□ -0.95
UBE2D3-209ENST00000394804 NBEAQ8NFP9 2946 aa9.12□□□□□ -0.95
UBE2D3-209ENST00000394804 CTSGP08311 255 aa9.12□□□□□ -0.95
UBE2D3-209ENST00000394804 FANCD2OSQ96PS1 177 aa9.12□□□□□ -0.95
UBE2D3-209ENST00000394804 DPH3P1Q9H4G8 78 aa9.12□□□□□ -0.95
UBE2D3-209ENST00000394804 TP73-AS1Q9UF72 201 aa9.12□□□□□ -0.95
UBE2D3-209ENST00000394804 H7C1H1 209 aa9.11□□□□□ -0.95
UBE2D3-209ENST00000394804 CIDEAO60543 219 aa9.11□□□□□ -0.95
UBE2D3-209ENST00000394804 TMEM170BQ5T4T1 132 aa9.11□□□□□ -0.95
UBE2D3-209ENST00000394804 C8orf86Q6ZUL3 223 aa9.11□□□□□ -0.95
UBE2D3-209ENST00000394804 Q8NA96 180 aa9.11□□□□□ -0.95
UBE2D3-209ENST00000394804 CYSLTR1Q9Y271 337 aa9.11□□□□□ -0.95
UBE2D3-209ENST00000394804 K7EP34 96 aa9.11□□□□□ -0.95
UBE2D3-209ENST00000394804 PCP2Q8IVA1 136 aa9.11□□□□□ -0.95
UBE2D3-209ENST00000394804 NPFFR1Q9GZQ6 430 aa9.11□□□□□ -0.95
UBE2D3-209ENST00000394804 IGLV2-11P01706 119 aa9.11□□□□□ -0.95
UBE2D3-209ENST00000394804 ZNF56Q15929 161 aa9.11□□□□□ -0.95
UBE2D3-209ENST00000394804 PAPPA-AS1Q5QFB9 102 aa9.11□□□□□ -0.95
UBE2D3-209ENST00000394804 ZNF48Q96MX3 618 aaPredicted RBP9.11□□□□□ -0.95
UBE2D3-209ENST00000394804 SMG1Q96Q15 3661 aaKnown RBP9.11□□□□□ -0.95
UBE2D3-209ENST00000394804 HTN1P15515 57 aa9.1□□□□□ -0.95
UBE2D3-209ENST00000394804 LGALS3P17931 250 aaKnown RBP9.1□□□□□ -0.95
UBE2D3-209ENST00000394804 MSRB1Q9NZV6 116 aa9.1□□□□□ -0.95
UBE2D3-209ENST00000394804 IGHV7-81A0A0B4J1V7 117 aa9.1□□□□□ -0.95
UBE2D3-209ENST00000394804 A0A1B0GWB2 263 aa9.1□□□□□ -0.95
UBE2D3-209ENST00000394804 RUSC1-AS1Q66K80 236 aa9.1□□□□□ -0.95
UBE2D3-209ENST00000394804 MRAP2Q96G30 205 aa9.1□□□□□ -0.95
UBE2D3-209ENST00000394804 K7EP13 123 aa9.1□□□□□ -0.95
UBE2D3-209ENST00000394804 BPESC1Q9GZL8 116 aa9.1□□□□□ -0.95
UBE2D3-209ENST00000394804 FAM223BA6NKX1 122 aa9.09□□□□□ -0.95
UBE2D3-209ENST00000394804 ZNF815PA8K554 130 aa9.09□□□□□ -0.95
UBE2D3-209ENST00000394804 ATP5J2P56134 94 aa9.09□□□□□ -0.95
UBE2D3-209ENST00000394804 LOXL1Q08397 574 aaPredicted RBP9.09□□□□□ -0.95
UBE2D3-209ENST00000394804 FAM223AQ8IWN6 122 aa9.09□□□□□ -0.95
UBE2D3-209ENST00000394804 C14orf178Q8N769 122 aaPredicted RBP9.09□□□□□ -0.95
UBE2D3-209ENST00000394804 AGPAT4-IT1Q9H0P7 198 aa9.09□□□□□ -0.95
UBE2D3-209ENST00000394804 RBAKDNA6NC62 111 aa9.09□□□□□ -0.95
UBE2D3-209ENST00000394804 IGKV3-20P01619 116 aa9.09□□□□□ -0.95
UBE2D3-209ENST00000394804 URB1-AS1Q96HZ7 61 aa9.09□□□□□ -0.95
UBE2D3-209ENST00000394804 MRPL35Q9NZE8 188 aaKnown RBP9.09□□□□□ -0.95
UBE2D3-209ENST00000394804 SNRPD3P62318 126 aaKnown RBP9.09□□□□□ -0.95
UBE2D3-209ENST00000394804 SAMD13Q5VXD3 122 aa9.09□□□□□ -0.95
UBE2D3-209ENST00000394804 A0A1W2PPM0 123 aa9.09□□□□□ -0.96
UBE2D3-209ENST00000394804 APOMO95445 188 aa9.09□□□□□ -0.96
UBE2D3-209ENST00000394804 HOXB4P17483 251 aaPredicted RBP9.09□□□□□ -0.96
UBE2D3-209ENST00000394804 LY6DQ14210 128 aa9.09□□□□□ -0.96
UBE2D3-209ENST00000394804 BOD1L2Q8IYS8 172 aa9.09□□□□□ -0.96
UBE2D3-209ENST00000394804 CFHR4Q92496 578 aa9.09□□□□□ -0.96
UBE2D3-209ENST00000394804 TRAV26-2A0A0B4J265 109 aa9.08□□□□□ -0.96
UBE2D3-209ENST00000394804 TNFRSF13BO14836 293 aaPredicted RBP9.08□□□□□ -0.96
UBE2D3-209ENST00000394804 FSTL3O95633 263 aa9.08□□□□□ -0.96
UBE2D3-209ENST00000394804 CD7P09564 240 aa9.08□□□□□ -0.96
UBE2D3-209ENST00000394804 LINC01549A6NIU2 74 aa9.08□□□□□ -0.96
UBE2D3-209ENST00000394804 GATA1P15976 413 aaPredicted RBP9.08□□□□□ -0.96
UBE2D3-209ENST00000394804 CRIP1P50238 77 aa9.08□□□□□ -0.96
UBE2D3-209ENST00000394804 HOXA3O43365 443 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms