RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 BMI1P35226 326 aa6.98□□□□□ -1.29
RTN4-206ENST00000394611 CRYBA4P53673 196 aa6.98□□□□□ -1.29
RTN4-206ENST00000394611 SP5Q6BEB4 398 aaPredicted RBP6.98□□□□□ -1.29
RTN4-206ENST00000394611 OR9G4Q8NGQ1 327 aa6.98□□□□□ -1.29
RTN4-206ENST00000394611 RNF138Q8WVD3 245 aa6.98□□□□□ -1.29
RTN4-206ENST00000394611 G3V4G9 280 aa6.98□□□□□ -1.29
RTN4-206ENST00000394611 MC5RP33032 325 aa6.98□□□□□ -1.29
RTN4-206ENST00000394611 LY6DQ14210 128 aa6.98□□□□□ -1.29
RTN4-206ENST00000394611 LY6EQ16553 131 aa6.98□□□□□ -1.29
RTN4-206ENST00000394611 LINC00312Q9Y6C7 94 aa6.98□□□□□ -1.29
RTN4-206ENST00000394611 ZFYVE26Q68DK2 2539 aa6.98□□□□□ -1.29
RTN4-206ENST00000394611 IGHV3-73A0A0B4J1V6 119 aa6.98□□□□□ -1.29
RTN4-206ENST00000394611 PSMB11A5LHX3 300 aa6.98□□□□□ -1.29
RTN4-206ENST00000394611 C2orf91Q6ZV80 131 aa6.98□□□□□ -1.29
RTN4-206ENST00000394611 IGKV3OR2-268A0A0C4DH90 116 aa6.97□□□□□ -1.29
RTN4-206ENST00000394611 EGR2P11161 476 aaPredicted RBP6.97□□□□□ -1.29
RTN4-206ENST00000394611 FAM104BQ5XKR9 115 aa6.97□□□□□ -1.29
RTN4-206ENST00000394611 IL17RELQ6ZVW7 336 aa6.97□□□□□ -1.29
RTN4-206ENST00000394611 C21orf62Q9NYP8 219 aa6.97□□□□□ -1.29
RTN4-206ENST00000394611 C9JAW5 83 aa6.97□□□□□ -1.29
RTN4-206ENST00000394611 SNCGO76070 127 aa6.97□□□□□ -1.29
RTN4-206ENST00000394611 MFAP4P55083 255 aa6.97□□□□□ -1.29
RTN4-206ENST00000394611 A0A087WWL8 130 aa6.97□□□□□ -1.29
RTN4-206ENST00000394611 PRSS46E5RG02 174 aa6.97□□□□□ -1.29
RTN4-206ENST00000394611 SLC25A16P16260 332 aa6.97□□□□□ -1.29
RTN4-206ENST00000394611 KRTAP27-1Q3LI81 207 aa6.97□□□□□ -1.29
RTN4-206ENST00000394611 IGFL3Q6UXB1 125 aa6.97□□□□□ -1.29
RTN4-206ENST00000394611 PRR7Q8TB68 274 aa6.97□□□□□ -1.29
RTN4-206ENST00000394611 FNDC10F2Z333 226 aa6.96□□□□□ -1.29
RTN4-206ENST00000394611 CRXO43186 299 aaPredicted RBP6.96□□□□□ -1.29
RTN4-206ENST00000394611 LGALS7P47929 136 aa6.96□□□□□ -1.29
RTN4-206ENST00000394611 HERVK_113P61574 105 aa6.96□□□□□ -1.29
RTN4-206ENST00000394611 LINC01545Q5VT33 79 aa6.96□□□□□ -1.29
RTN4-206ENST00000394611 TEX29Q8N6K0 151 aa6.96□□□□□ -1.29
RTN4-206ENST00000394611 NAV2Q8IVL1 2488 aa6.96□□□□□ -1.3
RTN4-206ENST00000394611 LRBAP50851 2863 aa6.96□□□□□ -1.3
RTN4-206ENST00000394611 C17orf100A8MU93 164 aa6.96□□□□□ -1.3
RTN4-206ENST00000394611 RASL11AQ6T310 242 aa6.96□□□□□ -1.3
RTN4-206ENST00000394611 C22orf34Q6ZV56 151 aa6.96□□□□□ -1.3
RTN4-206ENST00000394611 TMEM219Q86XT9 240 aa6.96□□□□□ -1.3
RTN4-206ENST00000394611 SPAG8Q99932 426 aaPredicted RBP6.96□□□□□ -1.3
RTN4-206ENST00000394611 SIGLEC9Q9Y336 463 aa6.96□□□□□ -1.3
RTN4-206ENST00000394611 MTORP42345 2549 aa6.96□□□□□ -1.3
RTN4-206ENST00000394611 TRGV3P03979 118 aa6.96□□□□□ -1.3
RTN4-206ENST00000394611 FGF6P10767 208 aa6.96□□□□□ -1.3
RTN4-206ENST00000394611 RNASE4P34096 147 aaKnown RBP6.96□□□□□ -1.3
RTN4-206ENST00000394611 KLF5Q13887 457 aaPredicted RBP6.96□□□□□ -1.3
RTN4-206ENST00000394611 RNASE13Q5GAN3 156 aaKnown RBP6.96□□□□□ -1.3
RTN4-206ENST00000394611 TNFRSF14Q92956 283 aa6.96□□□□□ -1.3
RTN4-206ENST00000394611 CHTOPQ9Y3Y2 248 aaKnown RBP6.96□□□□□ -1.3
RTN4-206ENST00000394611 CSMD1Q96PZ7 3565 aa6.96□□□□□ -1.3
RTN4-206ENST00000394611 ASH1LQ9NR48 2969 aaKnown RBP6.96□□□□□ -1.3
RTN4-206ENST00000394611 SS18L1O75177 396 aaPredicted RBP6.95□□□□□ -1.3
RTN4-206ENST00000394611 Q6ZS92 163 aa6.95□□□□□ -1.3
RTN4-206ENST00000394611 FAM231DQ6ZW35 169 aa6.95□□□□□ -1.3
RTN4-206ENST00000394611 TMEM167AQ8TBQ9 72 aa6.95□□□□□ -1.3
RTN4-206ENST00000394611 FABP5P3A8MUU1 101 aa6.95□□□□□ -1.3
RTN4-206ENST00000394611 ZNF56Q15929 161 aa6.95□□□□□ -1.3
RTN4-206ENST00000394611 C12orf74Q32Q52 190 aa6.95□□□□□ -1.3
RTN4-206ENST00000394611 ZNF625Q96I27 306 aaPredicted RBP6.95□□□□□ -1.3
RTN4-206ENST00000394611 KIR2DL4Q99706 377 aa6.95□□□□□ -1.3
RTN4-206ENST00000394611 PRSS29PA6NIE9 313 aa6.95□□□□□ -1.3
RTN4-206ENST00000394611 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.95□□□□□ -1.3
RTN4-206ENST00000394611 WIPF2Q8TF74 440 aaPredicted RBP6.95□□□□□ -1.3
RTN4-206ENST00000394611 SLC25A15Q9Y619 301 aa6.95□□□□□ -1.3
RTN4-206ENST00000394611 LGALS3P17931 250 aaKnown RBP6.94□□□□□ -1.3
RTN4-206ENST00000394611 SMIM20Q8N5G0 67 aa6.94□□□□□ -1.3
RTN4-206ENST00000394611 DDB2Q92466 427 aa6.94□□□□□ -1.3
RTN4-206ENST00000394611 TRBV19A0A075B6N1 114 aa6.94□□□□□ -1.3
RTN4-206ENST00000394611 IGHV1-3A0A0C4DH29 117 aa6.94□□□□□ -1.3
RTN4-206ENST00000394611 TMEM238LA0A1B0GVL6 79 aa6.94□□□□□ -1.3
RTN4-206ENST00000394611 A6NJY4 79 aa6.94□□□□□ -1.3
RTN4-206ENST00000394611 FAM90A9PA6NNJ1 464 aa6.94□□□□□ -1.3
RTN4-206ENST00000394611 MT-ATP8P03928 68 aa6.94□□□□□ -1.3
RTN4-206ENST00000394611 IGHV1-8P0DP01 117 aa6.94□□□□□ -1.3
RTN4-206ENST00000394611 Q8NA96 180 aa6.94□□□□□ -1.3
RTN4-206ENST00000394611 IGSF10Q6WRI0 2623 aa6.94□□□□□ -1.3
RTN4-206ENST00000394611 IGKV1D-37A0A075B6S9 117 aa6.94□□□□□ -1.3
RTN4-206ENST00000394611 IGHV3OR16-12A0A075B7B8 117 aa6.94□□□□□ -1.3
RTN4-206ENST00000394611 PRR30Q53SZ7 412 aaPredicted RBP6.94□□□□□ -1.3
RTN4-206ENST00000394611 RNASE1P07998 156 aaKnown RBP6.94□□□□□ -1.3
RTN4-206ENST00000394611 Q6ZQT7 251 aa6.94□□□□□ -1.3
RTN4-206ENST00000394611 TIMD4Q96H15 378 aa6.94□□□□□ -1.3
RTN4-206ENST00000394611 ABCA12Q86UK0 2595 aa6.93□□□□□ -1.3
RTN4-206ENST00000394611 IGLL5B9A064 214 aa6.93□□□□□ -1.3
RTN4-206ENST00000394611 PRAC2D3DTV9 90 aa6.93□□□□□ -1.3
RTN4-206ENST00000394611 F6UB75 175 aa6.93□□□□□ -1.3
RTN4-206ENST00000394611 GP9P14770 177 aa6.93□□□□□ -1.3
RTN4-206ENST00000394611 ZFP2Q6ZN57 461 aa6.93□□□□□ -1.3
RTN4-206ENST00000394611 DTX2Q86UW9 622 aa6.93□□□□□ -1.3
RTN4-206ENST00000394611 CEND1Q8N111 149 aa6.93□□□□□ -1.3
RTN4-206ENST00000394611 HAX1O00165 279 aa6.93□□□□□ -1.3
RTN4-206ENST00000394611 ATP5LO75964 103 aa6.93□□□□□ -1.3
RTN4-206ENST00000394611 TSPAN13O95857 204 aa6.93□□□□□ -1.3
RTN4-206ENST00000394611 RPL13AP40429 203 aaKnown RBP6.93□□□□□ -1.3
RTN4-206ENST00000394611 KLRB1Q12918 225 aa6.93□□□□□ -1.3
RTN4-206ENST00000394611 ADIPOQQ15848 244 aa6.93□□□□□ -1.3
RTN4-206ENST00000394611 TEX36Q5VZQ5 186 aa6.93□□□□□ -1.3
RTN4-206ENST00000394611 A0A1B0GXF2 115 aa6.93□□□□□ -1.3
RTN4-206ENST00000394611 A8MWV9 139 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms