RNA–Protein interactions for RNA: ENST00000394023.7

SMARCC2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-203ENST00000394023 MRPL51Q4U2R6 128 aaKnown RBP14.61□□□□□ -0.07
SMARCC2-203ENST00000394023 BUB3O43684 328 aa14.6□□□□□ -0.07
SMARCC2-203ENST00000394023 ESDP10768 282 aa14.6□□□□□ -0.07
SMARCC2-203ENST00000394023 PET117Q6UWS5 81 aa14.6□□□□□ -0.07
SMARCC2-203ENST00000394023 AGPAT4-IT1Q9H0P7 198 aa14.6□□□□□ -0.07
SMARCC2-203ENST00000394023 ABCA2Q9BZC7 2435 aa14.6□□□□□ -0.07
SMARCC2-203ENST00000394023 RHPN1-AS1Q9BWJ2 59 aa14.6□□□□□ -0.07
SMARCC2-203ENST00000394023 KLF5Q13887 457 aaPredicted RBP14.59□□□□□ -0.07
SMARCC2-203ENST00000394023 A0A1B0GXF2 115 aa14.59□□□□□ -0.07
SMARCC2-203ENST00000394023 TMEM160Q9NX00 188 aa14.59□□□□□ -0.07
SMARCC2-203ENST00000394023 C5orf56Q8N8D9 126 aa14.59□□□□□ -0.07
SMARCC2-203ENST00000394023 IGLV2-11P01706 119 aa14.58□□□□□ -0.07
SMARCC2-203ENST00000394023 RNF151Q2KHN1 245 aa14.58□□□□□ -0.07
SMARCC2-203ENST00000394023 IFI27L1Q96BM0 104 aa14.58□□□□□ -0.07
SMARCC2-203ENST00000394023 CRIP1P50238 77 aa14.58□□□□□ -0.08
SMARCC2-203ENST00000394023 FOXC2Q99958 501 aa14.58□□□□□ -0.08
SMARCC2-203ENST00000394023 F6UB75 175 aa14.58□□□□□ -0.08
SMARCC2-203ENST00000394023 SIGLEC8Q9NYZ4 499 aa14.58□□□□□ -0.08
SMARCC2-203ENST00000394023 FAM159AQ6UWV7 190 aa14.58□□□□□ -0.08
SMARCC2-203ENST00000394023 NPYP01303 97 aa14.57□□□□□ -0.08
SMARCC2-203ENST00000394023 ZNF688P0C7X2 276 aa14.57□□□□□ -0.08
SMARCC2-203ENST00000394023 ASIPP42127 132 aa14.57□□□□□ -0.08
SMARCC2-203ENST00000394023 MPV17L2Q567V2 206 aa14.57□□□□□ -0.08
SMARCC2-203ENST00000394023 ZNF80P51504 273 aaPredicted RBP14.57□□□□□ -0.08
SMARCC2-203ENST00000394023 SMAD7O15105 426 aaKnown RBP14.57□□□□□ -0.08
SMARCC2-203ENST00000394023 TRBV12-3P01733 135 aa14.57□□□□□ -0.08
SMARCC2-203ENST00000394023 FOXE3Q13461 319 aa14.57□□□□□ -0.08
SMARCC2-203ENST00000394023 RAB37Q96AX2 223 aa14.57□□□□□ -0.08
SMARCC2-203ENST00000394023 PRORYQ9H606 182 aa14.57□□□□□ -0.08
SMARCC2-203ENST00000394023 TRAV26-2A0A0B4J265 109 aa14.56□□□□□ -0.08
SMARCC2-203ENST00000394023 FAM223BA6NKX1 122 aa14.56□□□□□ -0.08
SMARCC2-203ENST00000394023 RNF223E7ERA6 249 aa14.56□□□□□ -0.08
SMARCC2-203ENST00000394023 FAM223AQ8IWN6 122 aa14.56□□□□□ -0.08
SMARCC2-203ENST00000394023 STPG4Q8N801 248 aa14.56□□□□□ -0.08
SMARCC2-203ENST00000394023 A0A087X0K7 114 aa14.56□□□□□ -0.08
SMARCC2-203ENST00000394023 GATA1P15976 413 aaPredicted RBP14.56□□□□□ -0.08
SMARCC2-203ENST00000394023 C12orf54Q6X4T0 127 aa14.56□□□□□ -0.08
SMARCC2-203ENST00000394023 CCDC140Q96MF4 163 aa14.56□□□□□ -0.08
SMARCC2-203ENST00000394023 DOPEY1Q5JWR5 2465 aa14.55□□□□□ -0.08
SMARCC2-203ENST00000394023 C9orf139Q6ZV77 190 aa14.55□□□□□ -0.08
SMARCC2-203ENST00000394023 Q6ZVH6 145 aa14.55□□□□□ -0.08
SMARCC2-203ENST00000394023 C11orf44Q8N8P7 122 aa14.54□□□□□ -0.08
SMARCC2-203ENST00000394023 ST20Q9HBF5 79 aa14.54□□□□□ -0.08
SMARCC2-203ENST00000394023 RELNP78509 3460 aa14.54□□□□□ -0.08
SMARCC2-203ENST00000394023 TRAV21A0A0B4J279 112 aa14.54□□□□□ -0.08
SMARCC2-203ENST00000394023 PSMG4Q5JS54 123 aa14.54□□□□□ -0.08
SMARCC2-203ENST00000394023 C10orf105Q8TEF2 133 aa14.54□□□□□ -0.08
SMARCC2-203ENST00000394023 C14orf178Q8N769 122 aaPredicted RBP14.54□□□□□ -0.08
SMARCC2-203ENST00000394023 UNQ9165/PRO28630Q6UXU0 137 aa14.53□□□□□ -0.08
SMARCC2-203ENST00000394023 TP73-AS1Q9UF72 201 aa14.53□□□□□ -0.08
SMARCC2-203ENST00000394023 TRAV8-6A0A0B4J262 113 aa14.53□□□□□ -0.08
SMARCC2-203ENST00000394023 IGHV4-59P01825 116 aa14.53□□□□□ -0.08
SMARCC2-203ENST00000394023 TMEM208Q9BTX3 173 aa14.53□□□□□ -0.08
SMARCC2-203ENST00000394023 NDUFS8O00217 210 aa14.53□□□□□ -0.08
SMARCC2-203ENST00000394023 TNFRSF6BO95407 300 aa14.53□□□□□ -0.08
SMARCC2-203ENST00000394023 PPBPP02775 128 aa14.53□□□□□ -0.08
SMARCC2-203ENST00000394023 CD7P09564 240 aa14.53□□□□□ -0.08
SMARCC2-203ENST00000394023 Q8N6K4 173 aa14.53□□□□□ -0.08
SMARCC2-203ENST00000394023 SMAD5-AS1Q9Y6J3 95 aa14.53□□□□□ -0.08
SMARCC2-203ENST00000394023 USMG5Q96IX5 58 aa14.52□□□□□ -0.08
SMARCC2-203ENST00000394023 EBI3Q14213 229 aa14.52□□□□□ -0.08
SMARCC2-203ENST00000394023 TMEM97Q5BJF2 176 aa14.52□□□□□ -0.08
SMARCC2-203ENST00000394023 BEX4Q9NWD9 120 aaPredicted RBP14.52□□□□□ -0.08
SMARCC2-203ENST00000394023 GCSHP23434 173 aa14.52□□□□□ -0.09
SMARCC2-203ENST00000394023 SNRPD3P62318 126 aaKnown RBP14.52□□□□□ -0.09
SMARCC2-203ENST00000394023 PAX2Q02962 417 aa14.52□□□□□ -0.09
SMARCC2-203ENST00000394023 TMEM158Q8WZ71 300 aa14.51□□□□□ -0.09
SMARCC2-203ENST00000394023 NXT2Q9NPJ8 142 aaKnown RBP14.51□□□□□ -0.09
SMARCC2-203ENST00000394023 TRAV12-3A0A0B4J271 114 aa14.5□□□□□ -0.09
SMARCC2-203ENST00000394023 OVOL1O14753 267 aa14.5□□□□□ -0.09
SMARCC2-203ENST00000394023 LOXL1Q08397 574 aaPredicted RBP14.5□□□□□ -0.09
SMARCC2-203ENST00000394023 DAZ1Q9NQZ3 744 aaKnown RBP14.5□□□□□ -0.09
SMARCC2-203ENST00000394023 C2orf70A6NJV1 201 aa14.5□□□□□ -0.09
SMARCC2-203ENST00000394023 PEF1Q9UBV8 284 aaKnown RBP14.5□□□□□ -0.09
SMARCC2-203ENST00000394023 SYNJ2BPP57105 145 aa14.5□□□□□ -0.09
SMARCC2-203ENST00000394023 TMEM190Q8WZ59 177 aa14.5□□□□□ -0.09
SMARCC2-203ENST00000394023 F8W735 103 aaPredicted RBP14.49□□□□□ -0.09
SMARCC2-203ENST00000394023 DEFB112Q30KQ8 113 aa14.49□□□□□ -0.09
SMARCC2-203ENST00000394023 DYNLRB2Q8TF09 96 aa14.49□□□□□ -0.09
SMARCC2-203ENST00000394023 ZNF48Q96MX3 618 aaPredicted RBP14.49□□□□□ -0.09
SMARCC2-203ENST00000394023 MTORP42345 2549 aa14.49□□□□□ -0.09
SMARCC2-203ENST00000394023 NACAE9PAV3 2078 aa14.49□□□□□ -0.09
SMARCC2-203ENST00000394023 ZNF747Q9BV97 191 aa14.49□□□□□ -0.09
SMARCC2-203ENST00000394023 NPIPB6E9PJ23 425 aa14.48□□□□□ -0.09
SMARCC2-203ENST00000394023 DLEU1O43261 78 aa14.48□□□□□ -0.09
SMARCC2-203ENST00000394023 LINC00477Q96M19 166 aa14.48□□□□□ -0.09
SMARCC2-203ENST00000394023 ZNF56Q15929 161 aa14.48□□□□□ -0.09
SMARCC2-203ENST00000394023 LINC01356Q8N9X3 169 aa14.48□□□□□ -0.09
SMARCC2-203ENST00000394023 NAA38Q9BRA0 125 aaKnown RBP14.48□□□□□ -0.09
SMARCC2-203ENST00000394023 OR2K2Q8NGT1 345 aa14.48□□□□□ -0.09
SMARCC2-203ENST00000394023 COL12A1Q99715 3063 aa14.47□□□□□ -0.09
SMARCC2-203ENST00000394023 NDUFA4O00483 81 aa14.47□□□□□ -0.09
SMARCC2-203ENST00000394023 SCGB3A1Q96QR1 104 aa14.47□□□□□ -0.09
SMARCC2-203ENST00000394023 PRRC2AP48634 2157 aaKnown RBP14.47□□□□□ -0.09
SMARCC2-203ENST00000394023 ANKRD17O75179 2603 aaKnown RBP14.47□□□□□ -0.09
SMARCC2-203ENST00000394023 IGHV3OR16-12A0A075B7B8 117 aa14.47□□□□□ -0.09
SMARCC2-203ENST00000394023 NPSP0C0P6 89 aa14.46□□□□□ -0.09
SMARCC2-203ENST00000394023 GTSCR1Q86UQ5 136 aa14.46□□□□□ -0.09
SMARCC2-203ENST00000394023 A0A1W2PRX2 142 aa14.46□□□□□ -0.09
SMARCC2-203ENST00000394023 ZFAND3Q9H8U3 227 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms