RNA–Protein interactions for RNA: ENST00000393758.6

PDZD4-202, Transcript of PDZ domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDZD4, Length 3,763 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-202ENST00000393758 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.58□□□□□ -0.4
PDZD4-202ENST00000393758 DTX2Q86UW9 622 aa12.58□□□□□ -0.4
PDZD4-202ENST00000393758 SHISA9B4DS77 424 aa12.58□□□□□ -0.4
PDZD4-202ENST00000393758 H3BMG7 143 aa12.58□□□□□ -0.4
PDZD4-202ENST00000393758 KAAG1Q9UBP8 84 aa12.58□□□□□ -0.4
PDZD4-202ENST00000393758 IGKV2D-26A0A0A0MRZ7 120 aa12.57□□□□□ -0.4
PDZD4-202ENST00000393758 PDE6HQ13956 83 aa12.57□□□□□ -0.4
PDZD4-202ENST00000393758 MRPL16Q9NX20 251 aaKnown RBP12.57□□□□□ -0.4
PDZD4-202ENST00000393758 TMEM238C9JI98 176 aa12.57□□□□□ -0.4
PDZD4-202ENST00000393758 PRO3102Q9H379 93 aa12.56□□□□□ -0.4
PDZD4-202ENST00000393758 CUL9Q8IWT3 2517 aa12.56□□□□□ -0.4
PDZD4-202ENST00000393758 NCOR2Q9Y618 2525 aa12.56□□□□□ -0.4
PDZD4-202ENST00000393758 TRBV25-1A0A075B6N4 114 aa12.56□□□□□ -0.4
PDZD4-202ENST00000393758 G3V318 75 aa12.56□□□□□ -0.4
PDZD4-202ENST00000393758 SH2D6Q7Z4S9 175 aa12.56□□□□□ -0.4
PDZD4-202ENST00000393758 VMO1Q7Z5L0 202 aa12.56□□□□□ -0.4
PDZD4-202ENST00000393758 LAGE3Q14657 143 aa12.55□□□□□ -0.4
PDZD4-202ENST00000393758 TRGV3P03979 118 aa12.55□□□□□ -0.4
PDZD4-202ENST00000393758 IGFL3Q6UXB1 125 aa12.55□□□□□ -0.4
PDZD4-202ENST00000393758 ZNF562Q6V9R5 426 aa12.55□□□□□ -0.4
PDZD4-202ENST00000393758 C8orf31Q8N9H6 132 aa12.55□□□□□ -0.4
PDZD4-202ENST00000393758 CFHR4Q92496 578 aa12.55□□□□□ -0.4
PDZD4-202ENST00000393758 RAXQ9Y2V3 346 aa12.55□□□□□ -0.4
PDZD4-202ENST00000393758 TSSC4Q9Y5U2 329 aaPredicted RBP12.55□□□□□ -0.4
PDZD4-202ENST00000393758 IGHV3-11P01762 117 aa12.55□□□□□ -0.4
PDZD4-202ENST00000393758 TMEM219Q86XT9 240 aa12.55□□□□□ -0.4
PDZD4-202ENST00000393758 C2CD3Q4AC94 2353 aa12.55□□□□□ -0.4
PDZD4-202ENST00000393758 MRGPRG-AS1Q2M3A8 158 aa12.54□□□□□ -0.4
PDZD4-202ENST00000393758 CD300EQ496F6 205 aaPredicted RBP12.54□□□□□ -0.4
PDZD4-202ENST00000393758 C14orf178Q8N769 122 aaPredicted RBP12.54□□□□□ -0.4
PDZD4-202ENST00000393758 SIGMAR1Q99720 223 aa12.54□□□□□ -0.4
PDZD4-202ENST00000393758 NPFFR1Q9GZQ6 430 aa12.54□□□□□ -0.4
PDZD4-202ENST00000393758 ATMQ13315 3056 aa12.54□□□□□ -0.4
PDZD4-202ENST00000393758 A0A096LNJ9 63 aa12.54□□□□□ -0.4
PDZD4-202ENST00000393758 IGKV3-20P01619 116 aa12.54□□□□□ -0.4
PDZD4-202ENST00000393758 SRD5A1P18405 259 aa12.54□□□□□ -0.4
PDZD4-202ENST00000393758 HTN1P15515 57 aa12.53□□□□□ -0.4
PDZD4-202ENST00000393758 FAM74A4Q5TZK3 123 aa12.53□□□□□ -0.4
PDZD4-202ENST00000393758 CRYGBP07316 175 aa12.53□□□□□ -0.4
PDZD4-202ENST00000393758 PSMB2P49721 201 aa12.53□□□□□ -0.4
PDZD4-202ENST00000393758 SRSF1Q07955 248 aaKnown RBP eCLIP12.53□□□□□ -0.4
PDZD4-202ENST00000393758 WFDC2Q14508 124 aa12.53□□□□□ -0.4
PDZD4-202ENST00000393758 PIP4P1Q86T03 277 aa12.53□□□□□ -0.4
PDZD4-202ENST00000393758 FANCD2OSQ96PS1 177 aa12.53□□□□□ -0.4
PDZD4-202ENST00000393758 RNF5Q99942 180 aa12.53□□□□□ -0.4
PDZD4-202ENST00000393758 Q1RN00 199 aa12.53□□□□□ -0.4
PDZD4-202ENST00000393758 NEGR1Q7Z3B1 354 aa12.52□□□□□ -0.4
PDZD4-202ENST00000393758 AGRNO00468 2067 aa12.52□□□□□ -0.41
PDZD4-202ENST00000393758 LY6EQ16553 131 aa12.52□□□□□ -0.41
PDZD4-202ENST00000393758 GAGE13Q4V321 117 aa12.52□□□□□ -0.41
PDZD4-202ENST00000393758 CHTOPQ9Y3Y2 248 aaKnown RBP12.52□□□□□ -0.41
PDZD4-202ENST00000393758 CEACAM4O75871 244 aa12.51□□□□□ -0.41
PDZD4-202ENST00000393758 CTSGP08311 255 aa12.51□□□□□ -0.41
PDZD4-202ENST00000393758 RNASE4P34096 147 aaKnown RBP12.51□□□□□ -0.41
PDZD4-202ENST00000393758 DEFB1P60022 68 aa12.51□□□□□ -0.41
PDZD4-202ENST00000393758 OR10J6PQ8NGY7 276 aa12.51□□□□□ -0.41
PDZD4-202ENST00000393758 ODF1Q14990 250 aa12.51□□□□□ -0.41
PDZD4-202ENST00000393758 TMEM170BQ5T4T1 132 aa12.51□□□□□ -0.41
PDZD4-202ENST00000393758 AGPAT4-IT1Q9H0P7 198 aa12.51□□□□□ -0.41
PDZD4-202ENST00000393758 ZNF815PA8K554 130 aa12.51□□□□□ -0.41
PDZD4-202ENST00000393758 FGF6P10767 208 aa12.51□□□□□ -0.41
PDZD4-202ENST00000393758 AZU1P20160 251 aa12.51□□□□□ -0.41
PDZD4-202ENST00000393758 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.51□□□□□ -0.41
PDZD4-202ENST00000393758 ZNF493Q6ZR52 646 aa12.51□□□□□ -0.41
PDZD4-202ENST00000393758 WI2-2373I1.2A0A1W2PRP0 233 aa12.5□□□□□ -0.41
PDZD4-202ENST00000393758 G3V4G9 280 aa12.5□□□□□ -0.41
PDZD4-202ENST00000393758 IGLV11-55A0A075B6I3 123 aa12.5□□□□□ -0.41
PDZD4-202ENST00000393758 ATP6V0E1O15342 81 aa12.5□□□□□ -0.41
PDZD4-202ENST00000393758 CEND1Q8N111 149 aa12.5□□□□□ -0.41
PDZD4-202ENST00000393758 EEF1AKMT3Q96AZ1 226 aa12.49□□□□□ -0.41
PDZD4-202ENST00000393758 CIDEAO60543 219 aa12.49□□□□□ -0.41
PDZD4-202ENST00000393758 ATP5G2Q06055 141 aa12.49□□□□□ -0.41
PDZD4-202ENST00000393758 Q8N8P6 123 aa12.49□□□□□ -0.41
PDZD4-202ENST00000393758 PGPEP1Q9NXJ5 209 aa12.49□□□□□ -0.41
PDZD4-202ENST00000393758 PF4V1P10720 104 aa12.49□□□□□ -0.41
PDZD4-202ENST00000393758 MAP1AP78559 2803 aaPredicted RBP12.48□□□□□ -0.41
PDZD4-202ENST00000393758 SIVA1O15304 175 aa12.48□□□□□ -0.41
PDZD4-202ENST00000393758 PRTN3P24158 256 aa12.48□□□□□ -0.41
PDZD4-202ENST00000393758 SLC50A1Q9BRV3 221 aa12.48□□□□□ -0.41
PDZD4-202ENST00000393758 HOXA3O43365 443 aaPredicted RBP12.48□□□□□ -0.41
PDZD4-202ENST00000393758 SRSF8Q9BRL6 282 aaKnown RBP12.48□□□□□ -0.41
PDZD4-202ENST00000393758 SMPXQ9UHP9 88 aa12.47□□□□□ -0.41
PDZD4-202ENST00000393758 C12orf74Q32Q52 190 aa12.47□□□□□ -0.41
PDZD4-202ENST00000393758 Q6ZQT7 251 aa12.47□□□□□ -0.41
PDZD4-202ENST00000393758 IGHV3-64A0A075B6Q5 118 aa12.47□□□□□ -0.41
PDZD4-202ENST00000393758 RAB9AP51151 201 aa12.47□□□□□ -0.41
PDZD4-202ENST00000393758 ZNF256Q9Y2P7 627 aaPredicted RBP12.47□□□□□ -0.41
PDZD4-202ENST00000393758 ASIPP42127 132 aa12.46□□□□□ -0.41
PDZD4-202ENST00000393758 DPF1Q92782 380 aa12.46□□□□□ -0.41
PDZD4-202ENST00000393758 BEX4Q9NWD9 120 aaPredicted RBP12.46□□□□□ -0.41
PDZD4-202ENST00000393758 NACAE9PAV3 2078 aa12.46□□□□□ -0.41
PDZD4-202ENST00000393758 HERVK_113P61574 105 aa12.46□□□□□ -0.42
PDZD4-202ENST00000393758 C8orf86Q6ZUL3 223 aa12.46□□□□□ -0.42
PDZD4-202ENST00000393758 MAPKAPK5-AS1Q8N8E1 139 aa12.46□□□□□ -0.42
PDZD4-202ENST00000393758 TMEM238LA0A1B0GVL6 79 aa12.45□□□□□ -0.42
PDZD4-202ENST00000393758 A6NJY4 79 aa12.45□□□□□ -0.42
PDZD4-202ENST00000393758 H7C1H1 209 aa12.45□□□□□ -0.42
PDZD4-202ENST00000393758 CHD8Q9HCK8 2581 aa12.45□□□□□ -0.42
PDZD4-202ENST00000393758 IGLL5B9A064 214 aa12.45□□□□□ -0.42
PDZD4-202ENST00000393758 TRBV6-1A0A0K0K1D8 114 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms