RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 XGP55808 180 aa13.42□□□□□ -0.26
TRAF3IP1-202ENST00000391993 U3KQA8 63 aa13.42□□□□□ -0.26
TRAF3IP1-202ENST00000391993 LTBP2Q14767 1821 aa13.42□□□□□ -0.26
TRAF3IP1-202ENST00000391993 TCF15Q12870 199 aa13.42□□□□□ -0.26
TRAF3IP1-202ENST00000391993 SIGLEC9Q9Y336 463 aa13.42□□□□□ -0.26
TRAF3IP1-202ENST00000391993 PRR25Q96S07 402 aa13.41□□□□□ -0.26
TRAF3IP1-202ENST00000391993 E9PLD3 99 aa13.41□□□□□ -0.26
TRAF3IP1-202ENST00000391993 SLC25A20O43772 301 aa13.41□□□□□ -0.26
TRAF3IP1-202ENST00000391993 TDHQ8IZJ6 230 aa13.41□□□□□ -0.26
TRAF3IP1-202ENST00000391993 OR11H6Q8NGC7 330 aa13.41□□□□□ -0.26
TRAF3IP1-202ENST00000391993 RS1O15537 224 aa13.4□□□□□ -0.26
TRAF3IP1-202ENST00000391993 PSMG4Q5JS54 123 aa13.4□□□□□ -0.26
TRAF3IP1-202ENST00000391993 RUSC1-AS1Q66K80 236 aa13.4□□□□□ -0.26
TRAF3IP1-202ENST00000391993 SHANK2-AS3Q9BTD1 123 aa13.4□□□□□ -0.26
TRAF3IP1-202ENST00000391993 TIMM23O14925 209 aa13.4□□□□□ -0.26
TRAF3IP1-202ENST00000391993 IFITM1P13164 125 aa13.4□□□□□ -0.26
TRAF3IP1-202ENST00000391993 IL17RELQ6ZVW7 336 aa13.4□□□□□ -0.26
TRAF3IP1-202ENST00000391993 SS18L1O75177 396 aaPredicted RBP13.39□□□□□ -0.27
TRAF3IP1-202ENST00000391993 NDPQ00604 133 aa13.39□□□□□ -0.27
TRAF3IP1-202ENST00000391993 C2orf82Q6UX34 121 aa13.39□□□□□ -0.27
TRAF3IP1-202ENST00000391993 ANKRD29Q8N6D5 301 aa13.39□□□□□ -0.27
TRAF3IP1-202ENST00000391993 C15orf53Q8NAA6 179 aa13.39□□□□□ -0.27
TRAF3IP1-202ENST00000391993 SETD2Q9BYW2 2564 aaPredicted RBP13.39□□□□□ -0.27
TRAF3IP1-202ENST00000391993 ADARB2-AS1A8MUL3 147 aa13.39□□□□□ -0.27
TRAF3IP1-202ENST00000391993 SVIPQ8NHG7 77 aa13.38□□□□□ -0.27
TRAF3IP1-202ENST00000391993 TRGV3P03979 118 aa13.38□□□□□ -0.27
TRAF3IP1-202ENST00000391993 KLRD1Q13241 179 aa13.38□□□□□ -0.27
TRAF3IP1-202ENST00000391993 MYO9AB2RTY4 2548 aa13.38□□□□□ -0.27
TRAF3IP1-202ENST00000391993 F8VRH5 84 aa13.38□□□□□ -0.27
TRAF3IP1-202ENST00000391993 MRPL23Q16540 153 aaKnown RBP13.38□□□□□ -0.27
TRAF3IP1-202ENST00000391993 CFAP161Q6P656 301 aa13.38□□□□□ -0.27
TRAF3IP1-202ENST00000391993 C2orf66Q6UXQ4 117 aa13.38□□□□□ -0.27
TRAF3IP1-202ENST00000391993 LINC00527Q9UJ94 153 aa13.38□□□□□ -0.27
TRAF3IP1-202ENST00000391993 SRSF6Q13247 344 aaKnown RBP13.37□□□□□ -0.27
TRAF3IP1-202ENST00000391993 POU2AF1Q16633 256 aa13.37□□□□□ -0.27
TRAF3IP1-202ENST00000391993 MSMPQ1L6U9 139 aa13.37□□□□□ -0.27
TRAF3IP1-202ENST00000391993 TCTEX1D4Q5JR98 221 aa13.37□□□□□ -0.27
TRAF3IP1-202ENST00000391993 CLEC19AQ6UXS0 136 aa13.37□□□□□ -0.27
TRAF3IP1-202ENST00000391993 THAP8Q8NA92 274 aa13.37□□□□□ -0.27
TRAF3IP1-202ENST00000391993 PTPRSQ13332 1948 aa13.36□□□□□ -0.27
TRAF3IP1-202ENST00000391993 TRPT1Q86TN4 253 aaKnown RBP13.36□□□□□ -0.27
TRAF3IP1-202ENST00000391993 TEN1Q86WV5 123 aa13.36□□□□□ -0.27
TRAF3IP1-202ENST00000391993 RAB1BQ9H0U4 201 aa13.36□□□□□ -0.27
TRAF3IP1-202ENST00000391993 VCX2Q9H322 139 aa13.36□□□□□ -0.27
TRAF3IP1-202ENST00000391993 EYSQ5T1H1 3165 aa13.36□□□□□ -0.27
TRAF3IP1-202ENST00000391993 TRAV8-3A0A0A6YYJ7 113 aa13.36□□□□□ -0.27
TRAF3IP1-202ENST00000391993 RNASE4P34096 147 aaKnown RBP13.36□□□□□ -0.27
TRAF3IP1-202ENST00000391993 CRIP1P50238 77 aa13.36□□□□□ -0.27
TRAF3IP1-202ENST00000391993 PVRIGQ6DKI7 326 aa13.36□□□□□ -0.27
TRAF3IP1-202ENST00000391993 Q8N8P6 123 aa13.36□□□□□ -0.27
TRAF3IP1-202ENST00000391993 FAM159AQ6UWV7 190 aa13.36□□□□□ -0.27
TRAF3IP1-202ENST00000391993 SIGLEC15Q6ZMC9 328 aa13.36□□□□□ -0.27
TRAF3IP1-202ENST00000391993 SRD5A1P18405 259 aa13.35□□□□□ -0.27
TRAF3IP1-202ENST00000391993 IGKV1-17P01599 117 aa13.35□□□□□ -0.27
TRAF3IP1-202ENST00000391993 ORMDL2Q53FV1 153 aa13.35□□□□□ -0.27
TRAF3IP1-202ENST00000391993 TIMD4Q96H15 378 aa13.35□□□□□ -0.27
TRAF3IP1-202ENST00000391993 ZNF71Q9NQZ8 489 aaPredicted RBP13.35□□□□□ -0.27
TRAF3IP1-202ENST00000391993 A0A087WX48 190 aa13.34□□□□□ -0.27
TRAF3IP1-202ENST00000391993 C17orf100A8MU93 164 aa13.34□□□□□ -0.27
TRAF3IP1-202ENST00000391993 C16orf97H3BN30 126 aa13.34□□□□□ -0.27
TRAF3IP1-202ENST00000391993 IGHV1-3A0A0C4DH29 117 aa13.34□□□□□ -0.27
TRAF3IP1-202ENST00000391993 TLN1Q9Y490 2541 aaKnown RBP13.34□□□□□ -0.27
TRAF3IP1-202ENST00000391993 IGHV1-8P0DP01 117 aa13.34□□□□□ -0.27
TRAF3IP1-202ENST00000391993 DGAT2L7PQ6IED9 249 aa13.34□□□□□ -0.27
TRAF3IP1-202ENST00000391993 ZNF491Q8N8L2 437 aa13.33□□□□□ -0.28
TRAF3IP1-202ENST00000391993 DSCAMO60469 2012 aa13.33□□□□□ -0.28
TRAF3IP1-202ENST00000391993 A0A087WWL8 130 aa13.33□□□□□ -0.28
TRAF3IP1-202ENST00000391993 A0A096LNJ9 63 aa13.33□□□□□ -0.28
TRAF3IP1-202ENST00000391993 NTN3O00634 580 aaPredicted RBP13.33□□□□□ -0.28
TRAF3IP1-202ENST00000391993 LY6HO94772 140 aa13.33□□□□□ -0.28
TRAF3IP1-202ENST00000391993 GFRALQ6UXV0 394 aa13.33□□□□□ -0.28
TRAF3IP1-202ENST00000391993 HIGD1BQ9P298 99 aa13.33□□□□□ -0.28
TRAF3IP1-202ENST00000391993 TRBV7-9A0A0J9YWB2 115 aa13.33□□□□□ -0.28
TRAF3IP1-202ENST00000391993 ZNF80P51504 273 aaPredicted RBP13.33□□□□□ -0.28
TRAF3IP1-202ENST00000391993 ZNF833PQ6ZTB9 187 aa13.33□□□□□ -0.28
TRAF3IP1-202ENST00000391993 OR10J6PQ8NGY7 276 aa13.33□□□□□ -0.28
TRAF3IP1-202ENST00000391993 SLC25A15Q9Y619 301 aa13.33□□□□□ -0.28
TRAF3IP1-202ENST00000391993 METTL26Q96S19 204 aa13.32□□□□□ -0.28
TRAF3IP1-202ENST00000391993 SPATA25Q9BR10 227 aa13.32□□□□□ -0.28
TRAF3IP1-202ENST00000391993 PRO1854Q9UHT4 67 aa13.32□□□□□ -0.28
TRAF3IP1-202ENST00000391993 BSPH1Q075Z2 132 aa13.32□□□□□ -0.28
TRAF3IP1-202ENST00000391993 SHISA2Q6UWI4 295 aa13.32□□□□□ -0.28
TRAF3IP1-202ENST00000391993 CCDC179H3BU77 68 aa13.31□□□□□ -0.28
TRAF3IP1-202ENST00000391993 TCL1BO95988 128 aa13.31□□□□□ -0.28
TRAF3IP1-202ENST00000391993 C7orf69Q9H7B7 122 aa13.31□□□□□ -0.28
TRAF3IP1-202ENST00000391993 MUC22E2RYF6 1773 aaPredicted RBP13.31□□□□□ -0.28
TRAF3IP1-202ENST00000391993 ASIPP42127 132 aa13.31□□□□□ -0.28
TRAF3IP1-202ENST00000391993 DYNAPQ8N1N2 210 aa13.31□□□□□ -0.28
TRAF3IP1-202ENST00000391993 CFHR4Q92496 578 aa13.31□□□□□ -0.28
TRAF3IP1-202ENST00000391993 RPL39LQ96EH5 51 aaKnown RBP13.31□□□□□ -0.28
TRAF3IP1-202ENST00000391993 C9orf153Q5TBE3 101 aa13.31□□□□□ -0.28
TRAF3IP1-202ENST00000391993 PLEKHB2Q96CS7 222 aa13.3□□□□□ -0.28
TRAF3IP1-202ENST00000391993 EDA2RQ9HAV5 297 aa13.3□□□□□ -0.28
TRAF3IP1-202ENST00000391993 WT1P19544 449 aaPredicted RBP13.3□□□□□ -0.28
TRAF3IP1-202ENST00000391993 SUMO2P61956 95 aaKnown RBP13.3□□□□□ -0.28
TRAF3IP1-202ENST00000391993 TP53TG1Q9Y2A0 90 aa13.3□□□□□ -0.28
TRAF3IP1-202ENST00000391993 NBR2O15453 112 aa13.3□□□□□ -0.28
TRAF3IP1-202ENST00000391993 SPXQ9BT56 116 aa13.3□□□□□ -0.28
TRAF3IP1-202ENST00000391993 TM2D2Q9BX73 214 aa13.3□□□□□ -0.28
TRAF3IP1-202ENST00000391993 IGHV3OR16-10A0A075B7F0 116 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms