RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 THAP8Q8NA92 274 aa12.84□□□□□ -0.35
SHANK1-204ENST00000391814 DEFB105AQ8NG35 78 aa12.84□□□□□ -0.35
SHANK1-204ENST00000391814 RNF183Q96D59 192 aa12.84□□□□□ -0.35
SHANK1-204ENST00000391814 OVOL3O00110 214 aa12.84□□□□□ -0.35
SHANK1-204ENST00000391814 COL8A2P25067 703 aa12.84□□□□□ -0.35
SHANK1-204ENST00000391814 PIP4P2Q8N4L2 257 aa12.84□□□□□ -0.35
SHANK1-204ENST00000391814 WDR86Q86TI4 376 aa12.84□□□□□ -0.35
SHANK1-204ENST00000391814 DAZ1Q9NQZ3 744 aaKnown RBP12.84□□□□□ -0.35
SHANK1-204ENST00000391814 SCN10AQ9Y5Y9 1956 aa12.83□□□□□ -0.35
SHANK1-204ENST00000391814 H3BUX3 64 aa12.83□□□□□ -0.36
SHANK1-204ENST00000391814 ATP6V0E1O15342 81 aa12.83□□□□□ -0.36
SHANK1-204ENST00000391814 CLPSL2Q6UWE3 100 aa12.83□□□□□ -0.36
SHANK1-204ENST00000391814 MUSTN1Q8IVN3 82 aa12.83□□□□□ -0.36
SHANK1-204ENST00000391814 ZNRF2Q8NHG8 242 aa12.83□□□□□ -0.36
SHANK1-204ENST00000391814 C20orf78Q9BR46 151 aa12.83□□□□□ -0.36
SHANK1-204ENST00000391814 ATOX1O00244 68 aa12.83□□□□□ -0.36
SHANK1-204ENST00000391814 F5H768 121 aa12.83□□□□□ -0.36
SHANK1-204ENST00000391814 EGR2P11161 476 aaPredicted RBP12.83□□□□□ -0.36
SHANK1-204ENST00000391814 CRYGCP07315 174 aa12.82□□□□□ -0.36
SHANK1-204ENST00000391814 DEFB131AP59861 70 aa12.82□□□□□ -0.36
SHANK1-204ENST00000391814 XCL2Q9UBD3 114 aa12.82□□□□□ -0.36
SHANK1-204ENST00000391814 TEN1Q86WV5 123 aa12.82□□□□□ -0.36
SHANK1-204ENST00000391814 IGHV1OR15-1A0A075B7D0 117 aa12.82□□□□□ -0.36
SHANK1-204ENST00000391814 HERVK_113P63121 156 aa12.82□□□□□ -0.36
SHANK1-204ENST00000391814 WT1-ASQ06250 92 aa12.81□□□□□ -0.36
SHANK1-204ENST00000391814 MDS2Q8NDY4 140 aa12.81□□□□□ -0.36
SHANK1-204ENST00000391814 ARHGEF17Q96PE2 2063 aaPredicted RBP12.81□□□□□ -0.36
SHANK1-204ENST00000391814 OOSP1A8MZH6 123 aa12.81□□□□□ -0.36
SHANK1-204ENST00000391814 BRK1Q8WUW1 75 aa12.81□□□□□ -0.36
SHANK1-204ENST00000391814 IGF2BP2-AS1Q96M15 143 aa12.81□□□□□ -0.36
SHANK1-204ENST00000391814 PLXND1Q9Y4D7 1925 aa12.81□□□□□ -0.36
SHANK1-204ENST00000391814 IGHV4-4A0A075B6R2 117 aa12.81□□□□□ -0.36
SHANK1-204ENST00000391814 SPRY2O43597 315 aa12.81□□□□□ -0.36
SHANK1-204ENST00000391814 HERV-K104P63124 156 aa12.81□□□□□ -0.36
SHANK1-204ENST00000391814 SVIPQ8NHG7 77 aa12.8□□□□□ -0.36
SHANK1-204ENST00000391814 FAM110DQ8TAY7 271 aaPredicted RBP12.8□□□□□ -0.36
SHANK1-204ENST00000391814 ZNF134P52741 427 aa12.8□□□□□ -0.36
SHANK1-204ENST00000391814 PRR20EP86478 221 aa12.8□□□□□ -0.36
SHANK1-204ENST00000391814 PRR20CP86479 221 aa12.8□□□□□ -0.36
SHANK1-204ENST00000391814 PRR20DP86480 221 aa12.8□□□□□ -0.36
SHANK1-204ENST00000391814 PRR20BP86481 221 aa12.8□□□□□ -0.36
SHANK1-204ENST00000391814 PRR20AP86496 221 aa12.8□□□□□ -0.36
SHANK1-204ENST00000391814 ZFP36L1Q07352 338 aaKnown RBP12.8□□□□□ -0.36
SHANK1-204ENST00000391814 LMO1P25800 156 aa12.8□□□□□ -0.36
SHANK1-204ENST00000391814 ZNF524Q96C55 264 aa12.8□□□□□ -0.36
SHANK1-204ENST00000391814 TTTY13Q9BZ97 58 aa12.8□□□□□ -0.36
SHANK1-204ENST00000391814 RUSC1-AS1Q66K80 236 aa12.79□□□□□ -0.36
SHANK1-204ENST00000391814 IGHV4-28A0A0C4DH34 117 aa12.79□□□□□ -0.36
SHANK1-204ENST00000391814 GNRH2O43555 120 aa12.79□□□□□ -0.36
SHANK1-204ENST00000391814 C15orf65H3BRN8 121 aa12.79□□□□□ -0.36
SHANK1-204ENST00000391814 K7EM74 188 aa12.79□□□□□ -0.36
SHANK1-204ENST00000391814 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.79□□□□□ -0.36
SHANK1-204ENST00000391814 IGKV2-29A2NJV5 120 aaPredicted RBP12.79□□□□□ -0.36
SHANK1-204ENST00000391814 DIAPH2-AS1Q14236 149 aa12.79□□□□□ -0.36
SHANK1-204ENST00000391814 TMEM105Q8N8V8 129 aa12.79□□□□□ -0.36
SHANK1-204ENST00000391814 RPL39LQ96EH5 51 aaKnown RBP12.79□□□□□ -0.36
SHANK1-204ENST00000391814 CMC4P56277 68 aaPredicted RBP12.78□□□□□ -0.36
SHANK1-204ENST00000391814 Q9H8V8 135 aa12.78□□□□□ -0.36
SHANK1-204ENST00000391814 FOXE3Q13461 319 aa12.78□□□□□ -0.36
SHANK1-204ENST00000391814 ARTNQ5T4W7 220 aa12.78□□□□□ -0.36
SHANK1-204ENST00000391814 DYNAPQ8N1N2 210 aa12.78□□□□□ -0.36
SHANK1-204ENST00000391814 GATA4P43694 442 aa12.78□□□□□ -0.36
SHANK1-204ENST00000391814 Q6ZR03 302 aa12.78□□□□□ -0.36
SHANK1-204ENST00000391814 LY6HO94772 140 aa12.78□□□□□ -0.36
SHANK1-204ENST00000391814 PSMB8P28062 276 aa12.78□□□□□ -0.36
SHANK1-204ENST00000391814 RHODO00212 210 aa12.78□□□□□ -0.36
SHANK1-204ENST00000391814 F6UB75 175 aa12.77□□□□□ -0.36
SHANK1-204ENST00000391814 SAA4P35542 130 aa12.77□□□□□ -0.36
SHANK1-204ENST00000391814 A0A0G2JNJ9 132 aa12.77□□□□□ -0.36
SHANK1-204ENST00000391814 CSRP1P21291 193 aaKnown RBP12.77□□□□□ -0.36
SHANK1-204ENST00000391814 WFDC9Q8NEX5 89 aa12.77□□□□□ -0.36
SHANK1-204ENST00000391814 Q9UFV3 132 aa12.77□□□□□ -0.36
SHANK1-204ENST00000391814 A4D1N5 150 aa12.77□□□□□ -0.37
SHANK1-204ENST00000391814 CHKB-CPT1BH3BT56 60 aa12.77□□□□□ -0.37
SHANK1-204ENST00000391814 CHD3Q12873 2000 aaKnown RBP12.77□□□□□ -0.37
SHANK1-204ENST00000391814 LINC01620Q4KN68 170 aa12.77□□□□□ -0.37
SHANK1-204ENST00000391814 CLEC2BQ92478 149 aa12.77□□□□□ -0.37
SHANK1-204ENST00000391814 ZNF503-AS2A6NEH8 195 aa12.77□□□□□ -0.37
SHANK1-204ENST00000391814 G3V318 75 aa12.77□□□□□ -0.37
SHANK1-204ENST00000391814 PTH2Q96A98 100 aa12.77□□□□□ -0.37
SHANK1-204ENST00000391814 GNLYP22749 145 aa12.76□□□□□ -0.37
SHANK1-204ENST00000391814 WDR90Q96KV7 1748 aa12.76□□□□□ -0.37
SHANK1-204ENST00000391814 FRMD6-AS1P0C7T7 363 aa12.76□□□□□ -0.37
SHANK1-204ENST00000391814 ATP6V0E2Q8NHE4 81 aa12.76□□□□□ -0.37
SHANK1-204ENST00000391814 DAD1P61803 113 aa12.75□□□□□ -0.37
SHANK1-204ENST00000391814 YLPM1P49750 1951 aaKnown RBP12.75□□□□□ -0.37
SHANK1-204ENST00000391814 WDR81Q562E7 1941 aa12.75□□□□□ -0.37
SHANK1-204ENST00000391814 BAALCQ8WXS3 180 aa12.75□□□□□ -0.37
SHANK1-204ENST00000391814 MT-ATP8P03928 68 aa12.75□□□□□ -0.37
SHANK1-204ENST00000391814 ZNF883P0CG24 379 aa12.75□□□□□ -0.37
SHANK1-204ENST00000391814 SPATA12Q7Z6I5 190 aa12.74□□□□□ -0.37
SHANK1-204ENST00000391814 HIGD1BQ9P298 99 aa12.73□□□□□ -0.37
SHANK1-204ENST00000391814 CABIN1Q9Y6J0 2220 aa12.73□□□□□ -0.37
SHANK1-204ENST00000391814 DIDO1Q9BTC0 2240 aaKnown RBP12.73□□□□□ -0.37
SHANK1-204ENST00000391814 MAPK1IP1LQ8NDC0 245 aa12.73□□□□□ -0.37
SHANK1-204ENST00000391814 GTSF1Q8WW33 167 aa12.73□□□□□ -0.37
SHANK1-204ENST00000391814 Q6ZUT4 128 aa12.73□□□□□ -0.37
SHANK1-204ENST00000391814 DAND5Q8N907 189 aa12.73□□□□□ -0.37
SHANK1-204ENST00000391814 CRYGBP07316 175 aa12.73□□□□□ -0.37
SHANK1-204ENST00000391814 ZFP2Q6ZN57 461 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms