RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 OR8A1Q8NGG7 326 aa13.04□□□□□ -0.32
THUMPD2-201ENST00000378727 OR10J6PQ8NGY7 276 aa13.04□□□□□ -0.32
THUMPD2-201ENST00000378727 LINC00477Q96M19 166 aa13.04□□□□□ -0.32
THUMPD2-201ENST00000378727 XKRY2A2RUG3 117 aa13.03□□□□□ -0.32
THUMPD2-201ENST00000378727 IFITM10A6NMD0 228 aa13.03□□□□□ -0.32
THUMPD2-201ENST00000378727 FABP5P3A8MUU1 101 aa13.03□□□□□ -0.32
THUMPD2-201ENST00000378727 K7EQG2 157 aa13.03□□□□□ -0.32
THUMPD2-201ENST00000378727 HLA-DQA1P01909 254 aa13.03□□□□□ -0.32
THUMPD2-201ENST00000378727 FN1P02751 2386 aaKnown RBP13.03□□□□□ -0.32
THUMPD2-201ENST00000378727 M0QZ24 198 aa13.03□□□□□ -0.32
THUMPD2-201ENST00000378727 CAMPP49913 170 aa13.03□□□□□ -0.32
THUMPD2-201ENST00000378727 HIST1H1AQ02539 215 aaPredicted RBP13.03□□□□□ -0.32
THUMPD2-201ENST00000378727 FHL3Q13643 280 aa13.03□□□□□ -0.32
THUMPD2-201ENST00000378727 PEMTQ9UBM1 199 aa13.03□□□□□ -0.32
THUMPD2-201ENST00000378727 LENEPQ9Y5L5 61 aa13.03□□□□□ -0.32
THUMPD2-201ENST00000378727 SETXQ7Z333 2677 aaKnown RBP13.02□□□□□ -0.32
THUMPD2-201ENST00000378727 AKR1D1P51857 326 aa13.02□□□□□ -0.33
THUMPD2-201ENST00000378727 SRSF2Q01130 221 aaKnown RBP13.02□□□□□ -0.33
THUMPD2-201ENST00000378727 SLAQ13239 276 aa13.02□□□□□ -0.33
THUMPD2-201ENST00000378727 COA6Q5JTJ3 125 aaKnown RBP13.02□□□□□ -0.33
THUMPD2-201ENST00000378727 PRR9Q5T870 116 aa13.02□□□□□ -0.33
THUMPD2-201ENST00000378727 RNF114Q9Y508 228 aa13.02□□□□□ -0.33
THUMPD2-201ENST00000378727 CSN3P07498 182 aa13.01□□□□□ -0.33
THUMPD2-201ENST00000378727 ZNF688P0C7X2 276 aa13.01□□□□□ -0.33
THUMPD2-201ENST00000378727 PROK1P58294 105 aa13.01□□□□□ -0.33
THUMPD2-201ENST00000378727 HBBP68871 147 aa13.01□□□□□ -0.33
THUMPD2-201ENST00000378727 Q6ZQT7 251 aa13.01□□□□□ -0.33
THUMPD2-201ENST00000378727 FAM19A4Q96LR4 140 aa13.01□□□□□ -0.33
THUMPD2-201ENST00000378727 C11orf21Q9P2W6 132 aa13.01□□□□□ -0.33
THUMPD2-201ENST00000378727 TSSC4Q9Y5U2 329 aaPredicted RBP13.01□□□□□ -0.33
THUMPD2-201ENST00000378727 KIAA1644Q3SXP7 199 aa13.01□□□□□ -0.33
THUMPD2-201ENST00000378727 HIST3H2BBQ8N257 126 aa13.01□□□□□ -0.33
THUMPD2-201ENST00000378727 ZFAND2AQ8N6M9 145 aa13.01□□□□□ -0.33
THUMPD2-201ENST00000378727 SSBP4Q9BWG4 385 aaPredicted RBP13.01□□□□□ -0.33
THUMPD2-201ENST00000378727 ORM1P02763 201 aa13□□□□□ -0.33
THUMPD2-201ENST00000378727 ARMS2P0C7Q2 107 aa13□□□□□ -0.33
THUMPD2-201ENST00000378727 LINC01559Q495D7 138 aa13□□□□□ -0.33
THUMPD2-201ENST00000378727 PRR31Q5SQ13 230 aa13□□□□□ -0.33
THUMPD2-201ENST00000378727 FLNBO75369 2602 aaKnown RBP13□□□□□ -0.33
THUMPD2-201ENST00000378727 A0A1B0GUS0 222 aa13□□□□□ -0.33
THUMPD2-201ENST00000378727 GRIFINA4D1Z8 144 aa13□□□□□ -0.33
THUMPD2-201ENST00000378727 CCL24O00175 119 aa13□□□□□ -0.33
THUMPD2-201ENST00000378727 APCSP02743 223 aa13□□□□□ -0.33
THUMPD2-201ENST00000378727 PDZD11Q5EBL8 140 aa13□□□□□ -0.33
THUMPD2-201ENST00000378727 PSMG4Q5JS54 123 aa13□□□□□ -0.33
THUMPD2-201ENST00000378727 Q6AWC8 147 aa13□□□□□ -0.33
THUMPD2-201ENST00000378727 IGKV3D-20A0A0C4DH25 116 aa12.99□□□□□ -0.33
THUMPD2-201ENST00000378727 A0A1B0GUT8 65 aa12.99□□□□□ -0.33
THUMPD2-201ENST00000378727 RPS20P60866 119 aaKnown RBP12.99□□□□□ -0.33
THUMPD2-201ENST00000378727 TPPP3Q9BW30 176 aa12.99□□□□□ -0.33
THUMPD2-201ENST00000378727 TCF21O43680 179 aa12.98□□□□□ -0.33
THUMPD2-201ENST00000378727 SNRPD3P62318 126 aaKnown RBP12.98□□□□□ -0.33
THUMPD2-201ENST00000378727 LYZL1Q6UWQ5 148 aa12.98□□□□□ -0.33
THUMPD2-201ENST00000378727 J3KRW8 73 aa12.98□□□□□ -0.33
THUMPD2-201ENST00000378727 IGLC6P0CF74 106 aa12.98□□□□□ -0.33
THUMPD2-201ENST00000378727 TP53TG3Q9ULZ0 132 aa12.98□□□□□ -0.33
THUMPD2-201ENST00000378727 SORL1Q92673 2214 aa12.97□□□□□ -0.33
THUMPD2-201ENST00000378727 ADARB2-AS1A8MUL3 147 aa12.97□□□□□ -0.33
THUMPD2-201ENST00000378727 CRISP2P16562 243 aa12.97□□□□□ -0.33
THUMPD2-201ENST00000378727 TMEM61Q8N0U2 210 aa12.97□□□□□ -0.33
THUMPD2-201ENST00000378727 CRLF1O75462 422 aa12.97□□□□□ -0.33
THUMPD2-201ENST00000378727 CD33P20138 364 aa12.97□□□□□ -0.33
THUMPD2-201ENST00000378727 CTRLP40313 264 aa12.97□□□□□ -0.33
THUMPD2-201ENST00000378727 KIR3DS1Q14943 382 aa12.97□□□□□ -0.33
THUMPD2-201ENST00000378727 APRG1Q8IVJ8 170 aa12.97□□□□□ -0.33
THUMPD2-201ENST00000378727 WNK1Q9H4A3 2382 aa12.96□□□□□ -0.33
THUMPD2-201ENST00000378727 TRBV7-9A0A0J9YWB2 115 aa12.96□□□□□ -0.33
THUMPD2-201ENST00000378727 PAFAH1B2P68402 229 aa12.96□□□□□ -0.33
THUMPD2-201ENST00000378727 RIGQ13278 110 aa12.96□□□□□ -0.33
THUMPD2-201ENST00000378727 DEFB114Q30KQ6 69 aa12.96□□□□□ -0.33
THUMPD2-201ENST00000378727 TMEM256Q8N2U0 113 aa12.96□□□□□ -0.33
THUMPD2-201ENST00000378727 FER1L6-AS1Q8NA97 138 aa12.96□□□□□ -0.33
THUMPD2-201ENST00000378727 A0A0J9YX75 114 aa12.95□□□□□ -0.34
THUMPD2-201ENST00000378727 F2Z2F3 143 aa12.95□□□□□ -0.34
THUMPD2-201ENST00000378727 SRIP30626 198 aa12.95□□□□□ -0.34
THUMPD2-201ENST00000378727 KRTAP10-3P60369 221 aa12.95□□□□□ -0.34
THUMPD2-201ENST00000378727 MUC21A0A0G2JKD1 596 aa12.95□□□□□ -0.34
THUMPD2-201ENST00000378727 MUC21A0A140T8X8 626 aa12.95□□□□□ -0.34
THUMPD2-201ENST00000378727 NUPR1O60356 82 aa12.95□□□□□ -0.34
THUMPD2-201ENST00000378727 LINC00310P59036 64 aa12.95□□□□□ -0.34
THUMPD2-201ENST00000378727 MUC21Q5SSG8 566 aa12.95□□□□□ -0.34
THUMPD2-201ENST00000378727 DYNLRB2Q8TF09 96 aa12.95□□□□□ -0.34
THUMPD2-201ENST00000378727 AGRNO00468 2067 aa12.94□□□□□ -0.34
THUMPD2-201ENST00000378727 GPX1P07203 203 aa12.94□□□□□ -0.34
THUMPD2-201ENST00000378727 Q0VG73 95 aa12.94□□□□□ -0.34
THUMPD2-201ENST00000378727 GATD1Q8NB37 220 aa12.94□□□□□ -0.34
THUMPD2-201ENST00000378727 RNASE4P34096 147 aaKnown RBP12.93□□□□□ -0.34
THUMPD2-201ENST00000378727 CD300EQ496F6 205 aaPredicted RBP12.93□□□□□ -0.34
THUMPD2-201ENST00000378727 BORCS7Q96B45 105 aa12.93□□□□□ -0.34
THUMPD2-201ENST00000378727 HIST1H2BLQ99880 126 aa12.93□□□□□ -0.34
THUMPD2-201ENST00000378727 C2CD3Q4AC94 2353 aa12.93□□□□□ -0.34
THUMPD2-201ENST00000378727 TRAV2A0A0B4J234 112 aa12.93□□□□□ -0.34
THUMPD2-201ENST00000378727 A0A1B0GW15 77 aa12.93□□□□□ -0.34
THUMPD2-201ENST00000378727 KLLNB2CW77 178 aa12.93□□□□□ -0.34
THUMPD2-201ENST00000378727 SSTP61278 116 aa12.93□□□□□ -0.34
THUMPD2-201ENST00000378727 TRAV21A0A0B4J279 112 aa12.92□□□□□ -0.34
THUMPD2-201ENST00000378727 FABP4P15090 132 aa12.92□□□□□ -0.34
THUMPD2-201ENST00000378727 S100A2P29034 98 aa12.92□□□□□ -0.34
THUMPD2-201ENST00000378727 ALKBH7Q9BT30 221 aaPredicted RBP12.92□□□□□ -0.34
THUMPD2-201ENST00000378727 AMBPP02760 352 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms