RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 EFNA4P52798 201 aa12.76□□□□□ -0.37
TRIM39-201ENST00000376656 SPATA25Q9BR10 227 aa12.76□□□□□ -0.37
TRIM39-201ENST00000376656 J3QR89 54 aa12.75□□□□□ -0.37
TRIM39-201ENST00000376656 C5orf64Q2M2E5 130 aa12.75□□□□□ -0.37
TRIM39-201ENST00000376656 TTC9CQ8N5M4 171 aa12.75□□□□□ -0.37
TRIM39-201ENST00000376656 NPBQ8NG41 125 aa12.75□□□□□ -0.37
TRIM39-201ENST00000376656 CTSGP08311 255 aa12.75□□□□□ -0.37
TRIM39-201ENST00000376656 A0A087WX48 190 aa12.75□□□□□ -0.37
TRIM39-201ENST00000376656 LAGE3Q14657 143 aa12.75□□□□□ -0.37
TRIM39-201ENST00000376656 TAL2Q16559 108 aa12.75□□□□□ -0.37
TRIM39-201ENST00000376656 PIP4P1Q86T03 277 aa12.75□□□□□ -0.37
TRIM39-201ENST00000376656 NRACQ8N912 160 aa12.75□□□□□ -0.37
TRIM39-201ENST00000376656 APC2O95996 2303 aa12.75□□□□□ -0.37
TRIM39-201ENST00000376656 KLRD1Q13241 179 aa12.74□□□□□ -0.37
TRIM39-201ENST00000376656 PRO0461Q9UI25 63 aa12.74□□□□□ -0.37
TRIM39-201ENST00000376656 RRN3P1Q2M238 152 aa12.74□□□□□ -0.37
TRIM39-201ENST00000376656 GAGE13Q4V321 117 aa12.74□□□□□ -0.37
TRIM39-201ENST00000376656 DPM3Q9P2X0 92 aa12.74□□□□□ -0.37
TRIM39-201ENST00000376656 BSNQ9UPA5 3926 aa12.74□□□□□ -0.37
TRIM39-201ENST00000376656 WNK2Q9Y3S1 2297 aa12.74□□□□□ -0.37
TRIM39-201ENST00000376656 LCNL1Q6ZST4 164 aa12.73□□□□□ -0.37
TRIM39-201ENST00000376656 TRBV7-3A0A075B6L6 115 aa12.73□□□□□ -0.37
TRIM39-201ENST00000376656 UFC1Q9Y3C8 167 aa12.73□□□□□ -0.37
TRIM39-201ENST00000376656 ATP6V0BQ99437 205 aa12.73□□□□□ -0.37
TRIM39-201ENST00000376656 ATP5G2Q06055 141 aa12.72□□□□□ -0.37
TRIM39-201ENST00000376656 ATMQ13315 3056 aa12.72□□□□□ -0.37
TRIM39-201ENST00000376656 ZNF672Q499Z4 452 aaPredicted RBP12.72□□□□□ -0.37
TRIM39-201ENST00000376656 NCBP2LA6PVI3 153 aaKnown RBP12.72□□□□□ -0.37
TRIM39-201ENST00000376656 Q6ZQT7 251 aa12.72□□□□□ -0.37
TRIM39-201ENST00000376656 ZNF502Q8TBZ5 544 aa12.72□□□□□ -0.37
TRIM39-201ENST00000376656 IGHV3-66A0A0C4DH42 116 aa12.71□□□□□ -0.37
TRIM39-201ENST00000376656 DCHS2Q6V1P9 2916 aa12.71□□□□□ -0.37
TRIM39-201ENST00000376656 A0A1B0GV72 72 aa12.71□□□□□ -0.38
TRIM39-201ENST00000376656 IGHV7-4-1A0A0J9YVY3 117 aa12.7□□□□□ -0.38
TRIM39-201ENST00000376656 PLNP26678 52 aa12.7□□□□□ -0.38
TRIM39-201ENST00000376656 AGPAT4-IT1Q9H0P7 198 aa12.7□□□□□ -0.38
TRIM39-201ENST00000376656 CACNA1HO95180 2353 aa12.7□□□□□ -0.38
TRIM39-201ENST00000376656 MORN3Q6PF18 240 aaPredicted RBP12.69□□□□□ -0.38
TRIM39-201ENST00000376656 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.69□□□□□ -0.38
TRIM39-201ENST00000376656 KLK15Q9H2R5 256 aa12.69□□□□□ -0.38
TRIM39-201ENST00000376656 CYSLTR1Q9Y271 337 aa12.69□□□□□ -0.38
TRIM39-201ENST00000376656 LRBAP50851 2863 aa12.69□□□□□ -0.38
TRIM39-201ENST00000376656 IGHV3OR16-13A0A075B7E8 117 aa12.69□□□□□ -0.38
TRIM39-201ENST00000376656 IGHV3-74A0A0B4J1X5 117 aa12.69□□□□□ -0.38
TRIM39-201ENST00000376656 A0A1B0GWB2 263 aa12.69□□□□□ -0.38
TRIM39-201ENST00000376656 B9A039 149 aa12.69□□□□□ -0.38
TRIM39-201ENST00000376656 DEFB123Q8N688 67 aa12.69□□□□□ -0.38
TRIM39-201ENST00000376656 OR11H6Q8NGC7 330 aa12.69□□□□□ -0.38
TRIM39-201ENST00000376656 MYMXA0A1B0GTQ4 84 aa12.68□□□□□ -0.38
TRIM39-201ENST00000376656 NDUFS8O00217 210 aa12.68□□□□□ -0.38
TRIM39-201ENST00000376656 LY6G5BQ8NDX9 201 aa12.68□□□□□ -0.38
TRIM39-201ENST00000376656 F8VRH5 84 aa12.68□□□□□ -0.38
TRIM39-201ENST00000376656 C20orf78Q9BR46 151 aa12.68□□□□□ -0.38
TRIM39-201ENST00000376656 OR11H12B2RN74 326 aa12.68□□□□□ -0.38
TRIM39-201ENST00000376656 H7C1H1 209 aa12.68□□□□□ -0.38
TRIM39-201ENST00000376656 OR11H1Q8NG94 326 aa12.68□□□□□ -0.38
TRIM39-201ENST00000376656 OR11H2Q8NH07 326 aa12.68□□□□□ -0.38
TRIM39-201ENST00000376656 LY6HO94772 140 aa12.67□□□□□ -0.38
TRIM39-201ENST00000376656 RAB9AP51151 201 aa12.67□□□□□ -0.38
TRIM39-201ENST00000376656 RBAKDNA6NC62 111 aa12.67□□□□□ -0.38
TRIM39-201ENST00000376656 BUB3O43684 328 aa12.67□□□□□ -0.38
TRIM39-201ENST00000376656 SPANXN1Q5VSR9 72 aa12.67□□□□□ -0.38
TRIM39-201ENST00000376656 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.66□□□□□ -0.38
TRIM39-201ENST00000376656 OTOGLQ3ZCN5 2332 aa12.66□□□□□ -0.38
TRIM39-201ENST00000376656 HOXA3O43365 443 aaPredicted RBP12.66□□□□□ -0.38
TRIM39-201ENST00000376656 APOMO95445 188 aa12.66□□□□□ -0.38
TRIM39-201ENST00000376656 LGALS1P09382 135 aaKnown RBP12.66□□□□□ -0.38
TRIM39-201ENST00000376656 CKS1BP61024 79 aa12.66□□□□□ -0.38
TRIM39-201ENST00000376656 PGPEP1Q9NXJ5 209 aa12.66□□□□□ -0.38
TRIM39-201ENST00000376656 GVINP1Q7Z2Y8 2422 aa12.66□□□□□ -0.38
TRIM39-201ENST00000376656 SCGB2A1O75556 95 aa12.65□□□□□ -0.38
TRIM39-201ENST00000376656 SMIM2Q9BVW6 85 aa12.65□□□□□ -0.38
TRIM39-201ENST00000376656 ZFAND3Q9H8U3 227 aa12.65□□□□□ -0.38
TRIM39-201ENST00000376656 PIEZO2Q9H5I5 2752 aa12.65□□□□□ -0.38
TRIM39-201ENST00000376656 ANKRD11Q6UB99 2663 aaPredicted RBP12.65□□□□□ -0.38
TRIM39-201ENST00000376656 IGHV3-49A0A0A0MS15 119 aa12.65□□□□□ -0.38
TRIM39-201ENST00000376656 TRAV12-1A0A0B4J245 112 aa12.65□□□□□ -0.38
TRIM39-201ENST00000376656 ODF3BA8MYP8 253 aa12.65□□□□□ -0.38
TRIM39-201ENST00000376656 LINC01619G3V211 115 aa12.65□□□□□ -0.38
TRIM39-201ENST00000376656 SPRY2O43597 315 aa12.65□□□□□ -0.38
TRIM39-201ENST00000376656 CD3EP07766 207 aa12.65□□□□□ -0.38
TRIM39-201ENST00000376656 SMCPP49901 116 aaPredicted RBP12.65□□□□□ -0.38
TRIM39-201ENST00000376656 SCGB3A1Q96QR1 104 aa12.65□□□□□ -0.38
TRIM39-201ENST00000376656 MSRB2Q9Y3D2 182 aa12.65□□□□□ -0.38
TRIM39-201ENST00000376656 AKAP13Q12802 2813 aa12.64□□□□□ -0.39
TRIM39-201ENST00000376656 H3BVH4 76 aa12.64□□□□□ -0.39
TRIM39-201ENST00000376656 SFTA2Q6UW10 78 aa12.64□□□□□ -0.39
TRIM39-201ENST00000376656 TRAV8-2A0A0B4J237 113 aa12.64□□□□□ -0.39
TRIM39-201ENST00000376656 TMEM78Q5T7P6 136 aa12.64□□□□□ -0.39
TRIM39-201ENST00000376656 ACACAQ13085 2346 aa12.64□□□□□ -0.39
TRIM39-201ENST00000376656 IGHV7-81A0A0B4J1V7 117 aa12.64□□□□□ -0.39
TRIM39-201ENST00000376656 C15orf32Q32M92 178 aa12.64□□□□□ -0.39
TRIM39-201ENST00000376656 WFDC12Q8WWY7 111 aa12.64□□□□□ -0.39
TRIM39-201ENST00000376656 CLEC3BP05452 202 aa12.63□□□□□ -0.39
TRIM39-201ENST00000376656 FOXI1Q12951 378 aa12.63□□□□□ -0.39
TRIM39-201ENST00000376656 SLC50A1Q9BRV3 221 aa12.63□□□□□ -0.39
TRIM39-201ENST00000376656 MRPL16Q9NX20 251 aaKnown RBP12.63□□□□□ -0.39
TRIM39-201ENST00000376656 RAXQ9Y2V3 346 aa12.63□□□□□ -0.39
TRIM39-201ENST00000376656 CLPSL1A2RUU4 121 aa12.63□□□□□ -0.39
TRIM39-201ENST00000376656 NEXN-AS1Q8NBZ9 246 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms